Nscu013374.1
Basic Information
- Insect
- Nephrocerus scutellatus
- Gene Symbol
- retn
- Assembly
- GCA_947095585.1
- Location
- OX352762.1:112651849-112671847[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.5e-19 1.8e-15 58.2 0.0 18 89 4 73 2 73 0.94
Sequence Information
- Coding Sequence
- ATGATAAGTACACCGATAAATCGATTACCAATAATGGCAAAATCTGTACTGGATCTGTATGAATTATACAACTTGGTTATTGCTCGCGGTGGTCTAGTCGATGTGATCAATAAGAAATTGTGGCAGGAAATAATCAAAGGACTTCATTTGCCATCAAGCATAACGAGTGCAGCATTCACTTTGCGAACGCAGTACATGAAATACTTGTATCCCTATGAATGCGAAAAGAAAAACCTCAGCTCACCCGCAGAATTGCAAGCAGCAATCGATGGGAATCGCAGAGAGGGACGCCGCTCCAGCTACGGTCAATTTGAGGCAATGCACAATCAAATGCAAATGCCTCAGATGGCCAGGCAGAATCTACCAGGTGGGATGCAGCAAATGTCACCACTCGCACTAGTAACACATGCCAACAGCCCACAAGCGGCAGCAGCCGCCGCAGCAGCAGCGGCAGCAGCTCATCATAGACTGATGGCTCCATCATTCGGACAGGTGACGCACGAAATCGAGCAACGCATGATGGAGTATTTAAAGCTGATGCAAGGCGGCAAAAATGAGCAACAACTACCACCATCCTCCGCAGGCAATATCAGCACACACAGCAGCAGCAACAGCAACATCCACCCGTCCAACGGCTCCAGTCATCAGCGTCAGCGTTCACAGAGTCCAGAAATCACTCCCCGCGAAGCACTTAATGCCCTCGAGATGTCACGTGTTGCCCTTTGGTCGATGTATCATAACAACACAAGTCCGCCGTCATCGGTAAACACTTCGCCACAGGGTATCATCGAACCACAACGACTTGTTCTTTCTCCCTCGACGCGATTTTCTAGCGAGGCTCTGAACCTTTCCGATTCGCCGCCAAATCCAACCGCTACTAAACGTGAGCACGAACGCGACACATCGGATATTTCCCATAGAGAAGACTTTAACCAACCACCACCAGCGAAGCGATGTTCTGGTTTGAATGATATTGGGGTCGGTGCTTTTAATGGTGCTGGATTTCCGGCGGGATTCTATGTTCCGCAAATAGCTGGCAATAATTACCACCACAATCACCATTCAGGAAGTGTTCGCGACGGTGGCGAATGCGATGACGATGAAGATGACGACGACATTGAGGATGAAGAAAAGCATTCCGTGGCTAATACATCAAATGATGATTGTGAACCACGTCACATAAATGGCCACCATCATGATGCTAAGTCAGATGATTCTGCAATTGAACAATCGCCGTCTACCATCAGACGAACAACATCGCCGTTGTCGGCAAAAAAACTACAGCTTCTTCATCATCAGCACAGTCTCAGTAGTAGTAAACATGACAAGGACAACAAAGAAACACTGCGCAATGAACAGCAACGACGAGATGAATCTTCCGCAAATGATATAACAGCCACGGGAATGGAACAGTTTTCATTCCTTTCTGGAATGCAATTCAAAGTTGCACGAAAAGGAACCGGGGCTAATGGTGAACCACAACTGGTGGTCAATCTAGAACTCAATGGTGTAAAATATGAAGGAGTTCTTATTGCGAACACCGCGCCTGCATCACCGGCAGTCAGTAGTGATGCTGATACAGCGACCAGTGTGTCCACAACACCGGCTGTTTCAACTACGACAACGCACAACATAATCGCAAACGGCCCAAGTAGTCTACACAAAGATTCCACACTCGAGGATAGACCACGTTCACTAATTATATCATAA
- Protein Sequence
- MISTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKNLSSPAELQAAIDGNRREGRRSSYGQFEAMHNQMQMPQMARQNLPGGMQQMSPLALVTHANSPQAAAAAAAAAAAAHHRLMAPSFGQVTHEIEQRMMEYLKLMQGGKNEQQLPPSSAGNISTHSSSNSNIHPSNGSSHQRQRSQSPEITPREALNALEMSRVALWSMYHNNTSPPSSVNTSPQGIIEPQRLVLSPSTRFSSEALNLSDSPPNPTATKREHERDTSDISHREDFNQPPPAKRCSGLNDIGVGAFNGAGFPAGFYVPQIAGNNYHHNHHSGSVRDGGECDDDEDDDDIEDEEKHSVANTSNDDCEPRHINGHHHDAKSDDSAIEQSPSTIRRTTSPLSAKKLQLLHHQHSLSSSKHDKDNKETLRNEQQRRDESSANDITATGMEQFSFLSGMQFKVARKGTGANGEPQLVVNLELNGVKYEGVLIANTAPASPAVSSDADTATSVSTTPAVSTTTTHNIIANGPSSLHKDSTLEDRPRSLIIS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -