Nign014533.2
Basic Information
- Insect
- Neoneuromus ignobilis
- Gene Symbol
- nfxl1
- Assembly
- GCA_029203775.1
- Location
- CP092091.1:28259811-28284736[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 17 0.48 3.8e+03 -1.2 0.9 4 10 196 202 195 202 0.94 2 17 5.5e-07 0.0045 17.8 17.2 1 19 210 227 210 227 0.99 3 17 2.7e-06 0.022 15.6 12.5 3 19 264 280 262 280 0.93 4 17 2.2 1.8e+04 -3.3 0.6 6 10 305 309 304 309 0.91 5 17 1.7e-08 0.00014 22.6 13.8 1 19 315 333 315 333 0.99 6 17 3.4e-05 0.27 12.1 10.3 1 18 368 385 368 386 0.97 7 17 1.4 1.2e+04 -2.7 0.4 1 5 395 399 395 404 0.73 8 17 9.8e-05 0.79 10.6 16.1 3 18 422 437 420 438 0.91 9 17 1.9e-08 0.00015 22.5 10.0 1 19 447 465 447 465 0.97 10 17 0.004 32 5.5 7.9 10 18 514 522 511 523 0.90 11 17 0.0076 61 4.6 4.9 1 12 532 542 532 542 0.96 12 17 1.9 1.6e+04 -3.1 1.5 14 18 571 575 571 576 0.83 13 17 0.038 3.1e+02 2.3 5.5 1 11 612 622 606 623 0.82 14 17 4 3.2e+04 -6.7 3.5 6 10 640 644 637 644 0.70 15 17 3.9e-05 0.31 11.9 12.3 3 19 653 669 652 669 0.94 16 17 1.4e-06 0.011 16.6 11.4 1 16 712 726 712 732 0.93 17 17 2.8 2.3e+04 -3.6 2.2 11 16 805 810 805 811 0.89
Sequence Information
- Coding Sequence
- ATGGGCGGACGTGGTAGAGGACGTGCCGAGAACCGACAGCATAAACATAAAGGTGTAAAAAATAACGAACTTCAAGATGCAGCAGTTACAACTGCTGATCAAAAATTTCAGGAAGCTAGACAGAAACTTCAGGCTTCTGTACAAAAGCATATAGAAGCTTACGAATCATCGTCAGAAGAAGAGGAAATTGAATCTAATAATGTAATagATTCAGTACTGaaaaatttttcacaatttgGTGGAGATAGTTTGGGGAGAACACAACAGTTTCTTGAAGATGCACTTGTATCTGGTGCTGCTACTTGTTTAATTTGTATAGCTTCTGTTAAAAGAAATGATGCAATATGGAGTTGCCTAGAATGTTACTGTTTTTTCCATTTATCTTGTATTCAACGATGGGGAAAAGATAGTATTGTACATCAAAAAAGAGCATATGAAAATTATCCAACTGGTAAAGTAGAACCAGAATTTAAGTGGGGTTGTCCAAAATGCAGACATGAATATGAACTAAATTTAATACCacaaaaatatgaatgtttttgtaaaaaagaagtCAATCCTTCATTTGATCCATGGCTTGTACCACATTCTTGTGGTAAAacatgtgaaaaaaaattacaaccaATTTGTGGTCATGAATGTGTATTACTTTGCCATCCaggaCCATGTCCACCTTGTCCAAAAACAATTAAATCATCATGTTATTGTGGTAAAAATAATCGACTTCAGCGGTGTAGTAACAAAGATTGgtcatgtaataaaatttgtgaaaaaagtcTCACTTGTAAAAAGCATCGTTGTATAATAAAATGCCATGTAGGTGAATGTCAACCATGTCCAAAGCAAAGCATGCAAAAATGTGAATGTGGTGCAGAAAAACAGCTTCGGAAATGTGCTGAACCAGTGTGGCATTGTTCAAAGgtatgtaataaaaaacttaGTTGTGGAAGTCATAATTGTGAGCGAACTTGTCATTCTGGTAAATGTGAAGTGTGTCCAAAAACACTTCCAAGATTATGCCCTTGTGGTAAAACTTCATATGAGCTACCATGCACTGAGGAAACTCCAACATGTGGTGATACTTGCGGTAAATTATTAGAATGTGGAATGCATGTTTGTCAACAACGTTGTCATCAAGATAGGTGTGGTGCTtgtcTTGaagtgataaataaaaattgtcgtTGTGGATTACATAGTAAAGAATTGCCATgtcaaaaagaatttttatgtgAAACAAAATGTAAACAGATCAGAGATTGTTATAAACATCCTTGCAATCGTAAAtGTTGTGAAGGTAATTGTCCACCATGTGAGAAACCTTGTGGTAAAACACTTAGTTGTGGAAAGCATAAATGTCTCTCTGCTTGTCATCGAGGATTATGTTATCCATGCACTTTAACTGTTTCTATCAGTTGCCACTGTGGTGGAACTGTTTTGATGGTACCATgtggaaaacaaaaaaaaacaaaacctCCTCGTTGTATGAAAGACTGTCgattgCCTCCGAGTTGTCATCATAAAAAGCAAGAAAAACATTATTGTCATTTTGGAGAATGTCCACCGTGTCATCAAATCTGTGATAAAAAATTAGGATGTGGTCATTTTTGTCCAGCAAAATGTCATTCATCAGTTTTAGTTCAAGTCAAAGATTCACAGACAGCTTCAATGCCTTGGGAACATAGAGCTCCTCAGATTAAACGTAAATGTTTGCAGTGTCCTGAATGCTTAGTAAAAGTTCCTATTACATGCTTTGGAAAACATGAAACATTTGAAGTAGCCTGTTTTGAGTCCAGGCCAATAAGCTGTCATAGATCATGTGGACGTATCTTAGATTGTCAAAATCATAAGTGTGATTTGGAATGCCATATGGTTGAAAATCCAGAAGATAAATTTAAGGCAGGAACTAACTGTGAGCAATGTGAATCCATGTGTACAATACCAAGACCTGATGGCTGTATACATCCATGTTCCAAGCCATGTCATTCAGGGATTTGTGATTCTTGTAAACAAATTATTCGTATGAAATGTCACTGTGGTCTTAATTTCCTCTTTATCAATTGTGCAGAATGGGTAGAACAGAGTAAAAAGGAAGAAGTGCAATCTTGTAAAAATCAATGTCCTAAAAATtaTGAATGTGGTCATCGCTGCagaaaaaaatgtcattctGGAGATTGTCCTGAAGCAGAACTATGTAAGaagaaaactaaaatttacTGCCCATGTAAACGTTTAAAAAAGGAAGTTTCATGTGATTTAATAAGGAATGGAACAGGAAAGCGTACGAATAAACGTAGGCACAGATCATTTGATCACGGAACCGTCTTAAAATCAATCATGTTGAAAATTTGTGTGAAGAATCGCGTTCTTCATGCTGAAAACAGACAGACAAGACAGGACGTCGCGGCGCACATCCATCGTGGATGTTGTGGGCGGCGGGCGAATCGTCACGGAGGTAGAGCGAGCCGATCATTAATAAAACTGTCAACGGGAGAAGGCGCACGACGGTGCACTGGCGAGCAGAATGAGTTCTTTTACCTCCCGTTTTCCTCTTTGAACGTATCCCTTTTTCCGTATACTCCTGTACTGATGGCAACCCTGTTACCCTCTTGTCGTCATAGTCTTTCGTcgtcgtcatcatcatcatctcgtGCATTTCTCAGCGCGAGCTCACGAGGTTCGCGACGTGTTTACTGTGAGATTCAAAGCAACACGAAGGACGAATCCCCGCTGATAGGTATAGTTATCATTACAAAGAGATGCTGTTGTCTACAGTTCGAGTAA
- Protein Sequence
- MGGRGRGRAENRQHKHKGVKNNELQDAAVTTADQKFQEARQKLQASVQKHIEAYESSSEEEEIESNNVIDSVLKNFSQFGGDSLGRTQQFLEDALVSGAATCLICIASVKRNDAIWSCLECYCFFHLSCIQRWGKDSIVHQKRAYENYPTGKVEPEFKWGCPKCRHEYELNLIPQKYECFCKKEVNPSFDPWLVPHSCGKTCEKKLQPICGHECVLLCHPGPCPPCPKTIKSSCYCGKNNRLQRCSNKDWSCNKICEKSLTCKKHRCIIKCHVGECQPCPKQSMQKCECGAEKQLRKCAEPVWHCSKVCNKKLSCGSHNCERTCHSGKCEVCPKTLPRLCPCGKTSYELPCTEETPTCGDTCGKLLECGMHVCQQRCHQDRCGACLEVINKNCRCGLHSKELPCQKEFLCETKCKQIRDCYKHPCNRKCCEGNCPPCEKPCGKTLSCGKHKCLSACHRGLCYPCTLTVSISCHCGGTVLMVPCGKQKKTKPPRCMKDCRLPPSCHHKKQEKHYCHFGECPPCHQICDKKLGCGHFCPAKCHSSVLVQVKDSQTASMPWEHRAPQIKRKCLQCPECLVKVPITCFGKHETFEVACFESRPISCHRSCGRILDCQNHKCDLECHMVENPEDKFKAGTNCEQCESMCTIPRPDGCIHPCSKPCHSGICDSCKQIIRMKCHCGLNFLFINCAEWVEQSKKEEVQSCKNQCPKNYECGHRCRKKCHSGDCPEAELCKKKTKIYCPCKRLKKEVSCDLIRNGTGKRTNKRRHRSFDHGTVLKSIMLKICVKNRVLHAENRQTRQDVAAHIHRGCCGRRANRHGGRASRSLIKLSTGEGARRCTGEQNEFFYLPFSSLNVSLFPYTPVLMATLLPSCRHSLSSSSSSSSRAFLSASSRGSRRVYCEIQSNTKDESPLIGIVIITKRCCCLQFE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -