Nign023976.1
Basic Information
- Insect
- Neoneuromus ignobilis
- Gene Symbol
- stc
- Assembly
- GCA_029203775.1
- Location
- CP092095.1:10961043-10966508[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 16 4 3.2e+04 -4.2 1.6 15 19 410 414 409 414 0.81 2 16 3.6e-06 0.029 15.2 16.3 3 18 459 474 445 475 0.86 3 16 1.4e-09 1.1e-05 26.1 11.9 1 19 511 529 511 529 0.98 4 16 1.6 1.3e+04 -2.8 0.8 6 10 559 563 558 563 0.90 5 16 1e-06 0.0081 17.0 11.3 1 18 569 586 569 587 0.97 6 16 1.9 1.6e+04 -3.1 0.9 6 10 619 623 618 623 0.89 7 16 0.0021 17 6.4 16.8 4 18 636 650 628 651 0.89 8 16 2.8 2.3e+04 -3.6 2.0 5 10 680 685 680 685 0.93 9 16 0.0009 7.3 7.5 7.9 1 11 691 701 691 702 0.97 10 16 1.9 1.5e+04 -3.1 1.0 4 10 706 712 705 712 0.87 11 16 2e-09 1.6e-05 25.6 12.3 1 18 718 735 718 736 0.97 12 16 4 3.2e+04 -7.8 12.8 10 19 783 793 769 793 0.77 13 16 2.6 2.1e+04 -3.5 0.6 5 10 818 823 818 823 0.79 14 16 1.9e-06 0.015 16.1 9.8 1 17 829 845 829 845 0.97 15 16 4 3.2e+04 -4.6 1.2 5 10 849 854 849 854 0.90 16 16 2.6e-07 0.0021 18.9 13.7 1 19 861 880 861 880 0.97
Sequence Information
- Coding Sequence
- atggctcagtggaaTCCATATTACAATAATGATTCTTCAAATATTCCACCTTTTCCACCTGTTAATTCAGATAATACAgaacaaaattattatggatttaatatgaatttagatTACAATTTTCCTATGcaatTTAAAAATCCACAAAATAATATACCTGTTAGTAATCAGCAAAACAAAAGTATGGAATCTCAACATCCACAACAATTGTATAATCaggattttcattttgatacGAAAGCAGGATGTTCAACAGTTAATCAAAATTCCTGTGATAAACCTGTTATGCTAGGAGATACATATTTTACTAGCAATGTGCCATCTCCAAACTTTAATTTATCCACAGGATTTACAGTTGAAAATTCAACAAACGGTGCTGCATCTAATAATGCAACATTAcattataattcaaaacataACTATGAAAAAGACAAAAACTTTTCatcaaaacattttacaaattctaaaaaaggatataaaaaaGATGAATTTGATCAAGTAAAAaatgatgataaaaaaaaactcttaagAGATGCTGCTGAATTTTTAAATGGCCAATCTAATAATGAGTTTAGTAGTCCTTCTACATCtggtttaaataatacaaattgtaatgaaaatgtGAAACAaaccaaaaattataattcaggCCAAAATAGAACACAGGTTTCTGATTAttcaagaaattttaaatttgactcTCAAAGATCAAGTTATTCAAGAGGAAATAAAGGACAATATCGTAACTATTCAAATGACCGTAAAATACAAGAGCAGCGTAATTTTGATACAAAGAAAAAATTTGGAAGTAATTTTGCTCAGGATtactctaaaaaaaataaaagttacagtgatagaaacagtTATCATGATTTTAATAAACGAGATTATAGAATATCTGAAAATAAGAATGACTCAGAAATCCAGAAAAATGAGTTGccaatgaaaagtttaaataaaaataagaagacTAATCAAAAACCAACTGAAGATTctttaactgaaaaaaaaatatctataaaaaaggATGttactgaaaaagaaaaattaacccAAAGAGAATGGTTAACAGAACAAGTATTAAATGGATCTCTGGAATGTCTTGTTTGTTGTGAGCGCATACGACAAAATAATGCTATATGGTCCTGTTATAATTGTTTCCATATTATTCACTTACAGTGTGTTCAGAAATGGGCTACTTCATCTCAAGCAGAAAAAGGGTGGCGATGTCCAGCTTGTCAACATGTAAATAATGAAGTTCCAAcagattattattgttattgtggTGCAATGAAAAACCCATCATCAAATACATTAGATACCCCACATTCATGTGGAGATATGTGCGGACGTAAATCTCGTAGATCTACTTGTAACCATAAGTGTACATTACTTTGTCATCCAGGTCCATGTCCACAGTGTGAAACACAAGTTGGAaggATTTGTGGGTGTGGTGCTACAAAACTGACAGTTTTGTGTAATCGTAGCACTCCAttattatgtgaaaatatttgtaacaaagTACTCAATTGTGGTAAACATAAATGCCAATTTAAGTGTCATGTTGGTGATTGTGATCCTTGTCAAGAAAAAGTAAAACAAGaatGTTATTGTACCAAAAGTAAACGTGAAGTAAATTGCACTATAGAAACAATTGATATAGAAAAATTTTCTTGTAATGAAGTGTGTGAAAAAGATCTTTTGTGTGGAAAtcataaatgcaaaaaaatatgtcatGACAAAGAATGTGAAAATTGTGATCTTTTACCTGTTTTAATCAAAACTTGTTATTGTGGTCAGAGTAAACTTACATTAGAACAAGAAAGAAATTCTTGTTTAGATCCAATTCCTTCTTGTGAAAagATTTGCTCGAAAAAATTACCATGTGGTCCATCAAGTTGTCCTCACATCTGTTTAAGTAAATGTCATCAAGGATCTTGTCCTCCATGTGATGGAAGCATGCTAGTTAGATGTCGTTGTGGACATATGGATCGAGAACTTCCTTGTAAACAAATAATCGGTCAACCTAATGATGCTCgttgtgaaaaaaaatgtaccaaGAAACGATTGTGTGGTCGGCATAAGTGCAATAAATTATGTTGCATTGAAATAGAACATCAATGTCTGCTTCCTTGTAATCGCATATTATCCTGTGGTAAACATCGTTGTGAGCAAACTTGCCATCGTGGTCGTTGTCTACCTTGTTATAGATCcagtTTTGAAGAATTATTCTGTGAATGTGGTACAAGTGTTTTGTTTCCACCAGTTCCATGTGGCACAAGACGTCCAGCTTGTACTCAGCGTTGTAGCCGACAACATGATTGTAATCATCCTGTTTTACATAATTGTCATAGTGAATCAGAATGCCCCCCTTGCTCTGTTCTGACACACAAATGGTGTTATGGCAAGCATGAGatgcgAAAAACAATTCCTTGCCATCAAAAAGAATTTACTTGTGGACGTCCATGCGGTAAAGACATTTCTTGTGGTAGGCACAAATGTATAGCAATGTGCCATTCTGGTGTATGCCATCCTGAAAATGTGAAATGTACACAAATGTGCAAGAAACCTCGTCCTTCTTGTGGACATTCATGTGCCAATGTTTGCCATGATGGTCCATGTCCAGATACACCATGTAAAGAAACTGTAAAAGTCACATGTGAATGTGGTCATAGATCTACAAGTAGAGGTTGTGCTGATAATGCTAGAGAATATCAGCGGATTGCTACTGCTATGTTGGCTTCAAAAATGGCAGATATGCAGTTAGGTCATTCAATAGATATTGGTGATATAGTAGGAAATAATGggcaaaaaaaacaaaacaatctTAAAACcttGCCTTGTAATGATGAATGTCGTTTGATTGAACGAAATAGAAGATTAGCTATAGGACTCCAAATTCGAAATCCTGATCTTTCTGCAAAATTAACACCACGATATTCAGAATTTATGCGCCAGTGGGGGAAAAAAGATGCGCGATTTTGTCAACTAGTACATGATAAATTGACTGAATTAGTGCAGTTAGCAAAACagTCCAAGCAGAAAAATCGAAGTTATTCTTTTGAATCCATGAAACACGATAAAAGACATTTTATTCATGAATATTGTGAACATTTTGGATGTGAATCTGCAGCTTATGACAAAGAACCAAACAGAAATGTAGTAGCTACTGCATCTCGTGATAAaGCATGGTTACCTAGCTACAGTTTATTAGAAGTACTTCAACGTGAAGCAGGTCAACGAAAAGTTCCAGGGCCCATGCTTAGAACCTCAAATCAAGCAGCTATTGCTGAAAGTGTTACTTTAAAAAAAGGTCTTGAAAGACCACAAACAAGAAACAATACAATGACTCAATTAAATCCTAGCCCTCCCAAATGTGAAGAAGctgaatttattgattattttgatgcgcctgattaa
- Protein Sequence
- MAQWNPYYNNDSSNIPPFPPVNSDNTEQNYYGFNMNLDYNFPMQFKNPQNNIPVSNQQNKSMESQHPQQLYNQDFHFDTKAGCSTVNQNSCDKPVMLGDTYFTSNVPSPNFNLSTGFTVENSTNGAASNNATLHYNSKHNYEKDKNFSSKHFTNSKKGYKKDEFDQVKNDDKKKLLRDAAEFLNGQSNNEFSSPSTSGLNNTNCNENVKQTKNYNSGQNRTQVSDYSRNFKFDSQRSSYSRGNKGQYRNYSNDRKIQEQRNFDTKKKFGSNFAQDYSKKNKSYSDRNSYHDFNKRDYRISENKNDSEIQKNELPMKSLNKNKKTNQKPTEDSLTEKKISIKKDVTEKEKLTQREWLTEQVLNGSLECLVCCERIRQNNAIWSCYNCFHIIHLQCVQKWATSSQAEKGWRCPACQHVNNEVPTDYYCYCGAMKNPSSNTLDTPHSCGDMCGRKSRRSTCNHKCTLLCHPGPCPQCETQVGRICGCGATKLTVLCNRSTPLLCENICNKVLNCGKHKCQFKCHVGDCDPCQEKVKQECYCTKSKREVNCTIETIDIEKFSCNEVCEKDLLCGNHKCKKICHDKECENCDLLPVLIKTCYCGQSKLTLEQERNSCLDPIPSCEKICSKKLPCGPSSCPHICLSKCHQGSCPPCDGSMLVRCRCGHMDRELPCKQIIGQPNDARCEKKCTKKRLCGRHKCNKLCCIEIEHQCLLPCNRILSCGKHRCEQTCHRGRCLPCYRSSFEELFCECGTSVLFPPVPCGTRRPACTQRCSRQHDCNHPVLHNCHSESECPPCSVLTHKWCYGKHEMRKTIPCHQKEFTCGRPCGKDISCGRHKCIAMCHSGVCHPENVKCTQMCKKPRPSCGHSCANVCHDGPCPDTPCKETVKVTCECGHRSTSRGCADNAREYQRIATAMLASKMADMQLGHSIDIGDIVGNNGQKKQNNLKTLPCNDECRLIERNRRLAIGLQIRNPDLSAKLTPRYSEFMRQWGKKDARFCQLVHDKLTELVQLAKQSKQKNRSYSFESMKHDKRHFIHEYCEHFGCESAAYDKEPNRNVVATASRDKAWLPSYSLLEVLQREAGQRKVPGPMLRTSNQAAIAESVTLKKGLERPQTRNNTMTQLNPSPPKCEEAEFIDYFDAPD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -