Nign023858.1
Basic Information
- Insect
- Neoneuromus ignobilis
- Gene Symbol
- pnr
- Assembly
- GCA_029203775.1
- Location
- CP092095.1:8837106-8841295[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.7e-18 1.3e-14 54.3 3.2 1 34 82 114 82 116 0.97 2 2 2e-19 9.1e-16 58.0 5.8 1 35 136 169 136 170 0.98
Sequence Information
- Coding Sequence
- ATGGCGAACTTGACACGAGATCGAGCTTCTACTTCGACCTGCAGTTTTGATGAAATCCGATTGAATGGGAAGCTACATGTTAAGCTAACAGGAGTTAAGAAGGATTGCAAGGTTTGCTCTCAACGAAATAAGCCTGGCGAAAGACACCAAACCACATATTACTGCGATACTTGCCTCGACAAGCCGAGGATGCATCTTGaagattatggAACAATGGATTTCCAATTCGGTGAAGGACGCGAATGTGTTAATTGTGGCGCAATATCTACACCATTGTGGCGTCGTGACGGCACCGGTCATTATTTATGCAATGCTTGTGGTCTTTATCACAAGATGAACGGCATGAATCGACCATTAATAAAACCATCTAAACGACTGACGGCAACTAGACGATTAGGTCTTTGTTGTACAAATTGTGGTACTCGTACGACGACACTTTGGCGAAGGAATAACGACGGTGAACCCGTATGCAACGCTTgtggtttatattttaaacttcatGGTGTTAATCGACCATTGGCGATGCGTAAGGATGGTATCCAGACGCGTAAACGTAAACCAAAAAAGCCCACAGGTGGGGCCAGTTCAGGTGCAGGGACGTCTTCTTCAAACGAACGAAATGACGATGCTCAACAACATACAGCGTCGTCATCAGCATCATCACCAAATGATGAATCATCAAAGTCATCAACATTGAACACACACAGTGTTCCTCACAGTACATCACAATCACACAATACAGACTGTATTGTAAAATCTGAACGGCCGTACATTGGTCGTACATCATTATTACCATCGACATCCACATCAAATTCGTCACATATAAAAAGTGAACCTTCTTTATATGATTTTCAACACCAACCATCGCAGTATAATTGTTTACAAAGTCAGTCATATCCTTATCAACAAATGTTTGGATTTTCATCAACAGCGACGGGTACCAGTGATGTGGCGTACCATCATCAACATCATGTGACAGCTGCCGCGAAGTTGATGGCATCGTCTTAA
- Protein Sequence
- MANLTRDRASTSTCSFDEIRLNGKLHVKLTGVKKDCKVCSQRNKPGERHQTTYYCDTCLDKPRMHLEDYGTMDFQFGEGRECVNCGAISTPLWRRDGTGHYLCNACGLYHKMNGMNRPLIKPSKRLTATRRLGLCCTNCGTRTTTLWRRNNDGEPVCNACGLYFKLHGVNRPLAMRKDGIQTRKRKPKKPTGGASSGAGTSSSNERNDDAQQHTASSSASSPNDESSKSSTLNTHSVPHSTSQSHNTDCIVKSERPYIGRTSLLPSTSTSNSSHIKSEPSLYDFQHQPSQYNCLQSQSYPYQQMFGFSSTATGTSDVAYHHQHHVTAAAKLMASS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -