Basic Information

Insect: Neoneuromus ignobilis
Gene Symbol: -
Assembly: GCA_029203775.1
Location: CP092088.1:10580770-10584074[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 1.2 98 4.5 0.5 10 23 201 214 200 214 0.96

2 14 6.9 5.6e+02 2.1 0.3 2 16 243 257 242 259 0.74

3 14 3.2e-05 0.0026 18.9 2.1 1 23 270 293 270 293 0.93

4 14 0.26 21 6.6 0.2 1 23 300 322 300 322 0.96

5 14 2.7e-06 0.00022 22.3 2.5 1 23 328 350 328 350 0.99

6 14 2.1e-05 0.0017 19.5 2.2 1 23 356 378 356 378 0.95

7 14 0.14 11 7.5 0.7 1 23 385 407 385 407 0.96

8 14 2.7e-06 0.00022 22.3 2.5 1 23 413 435 413 435 0.99

9 14 2.1e-05 0.0017 19.5 2.2 1 23 441 463 441 463 0.95

10 14 0.0013 0.11 13.9 0.5 1 23 470 492 470 492 0.97

11 14 0.00026 0.021 16.1 4.5 1 23 498 520 498 520 0.99

12 14 0.001 0.082 14.2 1.4 1 19 526 544 526 547 0.96

13 14 1.3e-06 0.00011 23.3 0.7 1 23 558 580 558 580 0.98

14 14 0.0001 0.0085 17.3 1.4 1 23 586 608 586 608 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	1.2	98	4.5	0.5	10	23	201	214	200	214	0.96
2	14	6.9	5.6e+02	2.1	0.3	2	16	243	257	242	259	0.74
3	14	3.2e-05	0.0026	18.9	2.1	1	23	270	293	270	293	0.93
4	14	0.26	21	6.6	0.2	1	23	300	322	300	322	0.96
5	14	2.7e-06	0.00022	22.3	2.5	1	23	328	350	328	350	0.99
6	14	2.1e-05	0.0017	19.5	2.2	1	23	356	378	356	378	0.95
7	14	0.14	11	7.5	0.7	1	23	385	407	385	407	0.96
8	14	2.7e-06	0.00022	22.3	2.5	1	23	413	435	413	435	0.99
9	14	2.1e-05	0.0017	19.5	2.2	1	23	441	463	441	463	0.95
10	14	0.0013	0.11	13.9	0.5	1	23	470	492	470	492	0.97
11	14	0.00026	0.021	16.1	4.5	1	23	498	520	498	520	0.99
12	14	0.001	0.082	14.2	1.4	1	19	526	544	526	547	0.96
13	14	1.3e-06	0.00011	23.3	0.7	1	23	558	580	558	580	0.98
14	14	0.0001	0.0085	17.3	1.4	1	23	586	608	586	608	0.97

Sequence Information

Coding Sequence: ATGTCAAGAAAGgttTGTAAGAATGAAAGACTGTCGTCGTTCATCTGCCATTCATGTGCTGCGTATTTGAAGACGTTCGTTGTTTTTCGCAATAAATGTATCGAAACAGAGTCTGcattatgtgatttttttcgAGATTCACGCTTCGACATAGAAGTAAAAAAGGAACCGGAAGACAAGATAACAGTTATCGAAAAAGAATGTAGTTTTTCCATGCCgggaaaaaaatcttttcgaCAGTGTTCACGAACCAATATCGATTCGTGCATAAAAAACGTCGATGAACTGAATATAGTAAAAGTTAAAACCGAAGTATACGATGAAGAAACTATTGACGAGAGAACGCATTCATGTTTTTCTACATCTTACGAGAGAGGATGGGATGAAAATCTCAGAACGTATCTTTCGTTACAAGAATCTATCGATATCAAAGAGGACAACGAGAATTTTGTCTACGATGAGAACACAACGTCGGAAGTACCGATCGACGCAAGAGAGACACACGCGACGGATTCGGACAACTGCGAAGATCGATCGTTAGAAAGTAGACGAGTTCGTTCAGGTCACGATTCGTTCACTGGTGACTCGAACAGTGGGTTGTTCGAGACGAAGTCACATCTCGACGTACATTTGAAAATACACTGCGAAGGAAAAGAAGATCTCCGTGCGACGAAGTCGCGCCGTCGACGAGCGACTAAGAACGTTGATGTTTTCGGTGGACCAATTCCATGCGATCAGTGCAAAATGTCGTTCTTGACGAAACATCGGTTACGCAAAAATATGTACCTCTATACCGGTGAGAAGCCGTTCAAGTGTGTCAAGTGCGGCAAGTCGTTTGTTAGTAGAATGAATTTATACCGACACTTTTCTTacgtgcattccaaaaaaaagaaaccgttCGCTTGCGATCTGTGCACGAAATGGTTCTTCAGCGCCGAGCGTCTGGTCGCTCACAAGAACGTGCACCTCGGCAAAAAACCGTTTAAGTGCAATgaatgcgaaaagtcgttttcgCGCAACACATTTCTGATCCAGCATAAGAGAATTCACACGGATGAAAACCAGTACATGTGCAACACGTGCGGAAAGTcgttctataataaatatagtttagaccgacactcctacgtgcattccaaaaaaaagaaaccgttCGCTTGCGATCTGTGCACGAAATGGTTCTTCAGCGCCGAGTGTCTGGTCGCTCACAAGAACGTGCACCTCGGCAAAAAACCGTTTAAGTGCAATgaatgcgaaaagtcgttttcgCGCAACACATTTCTGATCCAGCATAAGAGAATTCACACGGATGAAAACCAGTACATGTGCAACACGTGCGGAAAGTcgttctataataaatatagtttagaccgacactcctacgtgcattccaaaaaaaagaaaccgttCGCTTGCGATCTGTGCACGAAATCGTTCTTCAGCGCCGAGCGTCTGATCTCGCACAAGAACGTGCATCTCGGCAAAAAGCCGTTCAAGTGcaacgaatgcgaaaagtcgttttcgtgCAACACAACTCTGATCCGGCATAAGAGAGTTCACACGATTGGAAAACCATTTAAGTGCGACACGTGCGGCATGTCGTTCGctctgaaatttaattttaaccgACACTCCTACCGTACAGGAACGTGCACTTCGACAAAAAAACCGTTCAAGTGcaacgaatgcgaaaagtcgtATTCGAACAACGCGGAACTCCAGAGCCACCAGACGGTGCACACGGGTGAAAAACATTTCGTATGCGGTTTGTGCGGTGCCGCGTTTAGACTGAAATTTCATTTGCGGAAACATATGTATCTTCATACCGGACAGAAAATGCTGCATCAGTGTGAAATGTGCGAATAG
Protein Sequence: MSRKVCKNERLSSFICHSCAAYLKTFVVFRNKCIETESALCDFFRDSRFDIEVKKEPEDKITVIEKECSFSMPGKKSFRQCSRTNIDSCIKNVDELNIVKVKTEVYDEETIDERTHSCFSTSYERGWDENLRTYLSLQESIDIKEDNENFVYDENTTSEVPIDARETHATDSDNCEDRSLESRRVRSGHDSFTGDSNSGLFETKSHLDVHLKIHCEGKEDLRATKSRRRRATKNVDVFGGPIPCDQCKMSFLTKHRLRKNMYLYTGEKPFKCVKCGKSFVSRMNLYRHFSYVHSKKKKPFACDLCTKWFFSAERLVAHKNVHLGKKPFKCNECEKSFSRNTFLIQHKRIHTDENQYMCNTCGKSFYNKYSLDRHSYVHSKKKKPFACDLCTKWFFSAECLVAHKNVHLGKKPFKCNECEKSFSRNTFLIQHKRIHTDENQYMCNTCGKSFYNKYSLDRHSYVHSKKKKPFACDLCTKSFFSAERLISHKNVHLGKKPFKCNECEKSFSCNTTLIRHKRVHTIGKPFKCDTCGMSFALKFNFNRHSYRTGTCTSTKKPFKCNECEKSYSNNAELQSHQTVHTGEKHFVCGLCGAAFRLKFHLRKHMYLHTGQKMLHQCEMCE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -