Basic Information

Insect: Neoneuromus ignobilis
Gene Symbol: -
Assembly: GCA_029203775.1
Location: CP092098.1:5524165-5525790[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.00047 0.038 15.3 1.3 1 23 112 134 112 134 0.98

2 14 0.6 48 5.5 5.0 1 23 161 183 161 183 0.96

3 14 0.00019 0.015 16.5 0.8 1 23 189 211 189 211 0.95

4 14 0.25 20 6.7 0.4 1 23 218 240 218 240 0.91

5 14 1.8e-06 0.00015 22.9 2.1 1 23 246 268 246 268 0.99

6 14 0.00038 0.031 15.5 2.3 1 23 275 297 275 297 0.99

7 14 2.5e-06 0.0002 22.4 1.7 1 23 303 325 303 325 0.98

8 14 1.4e-05 0.0012 20.0 0.8 1 23 331 353 331 353 0.97

9 14 0.0014 0.12 13.7 3.4 1 23 359 381 359 381 0.95

10 14 0.0018 0.15 13.4 1.2 1 23 388 410 388 410 0.97

11 14 0.18 15 7.1 2.3 1 23 416 438 416 438 0.96

12 14 2.3e-06 0.00018 22.6 1.2 1 23 444 466 444 466 0.97

13 14 3e-05 0.0025 19.0 1.5 1 23 472 494 472 494 0.96

14 14 0.0023 0.19 13.1 2.8 1 23 501 523 501 523 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.00047	0.038	15.3	1.3	1	23	112	134	112	134	0.98
2	14	0.6	48	5.5	5.0	1	23	161	183	161	183	0.96
3	14	0.00019	0.015	16.5	0.8	1	23	189	211	189	211	0.95
4	14	0.25	20	6.7	0.4	1	23	218	240	218	240	0.91
5	14	1.8e-06	0.00015	22.9	2.1	1	23	246	268	246	268	0.99
6	14	0.00038	0.031	15.5	2.3	1	23	275	297	275	297	0.99
7	14	2.5e-06	0.0002	22.4	1.7	1	23	303	325	303	325	0.98
8	14	1.4e-05	0.0012	20.0	0.8	1	23	331	353	331	353	0.97
9	14	0.0014	0.12	13.7	3.4	1	23	359	381	359	381	0.95
10	14	0.0018	0.15	13.4	1.2	1	23	388	410	388	410	0.97
11	14	0.18	15	7.1	2.3	1	23	416	438	416	438	0.96
12	14	2.3e-06	0.00018	22.6	1.2	1	23	444	466	444	466	0.97
13	14	3e-05	0.0025	19.0	1.5	1	23	472	494	472	494	0.96
14	14	0.0023	0.19	13.1	2.8	1	23	501	523	501	523	0.97

Sequence Information

Coding Sequence: ATGTTTACTGAACCGATATCGATTCGTGCACAAAAAAACGATGAACCGAATATCGCAAAAGTTAAAATCGAAGTAGACGATGAAGAAACTAATGACGAGAGAACGCAGTCATGTTTTTCTACATCGTACGAGAGAGGATCGGATGAAAATCTCAGAACGTATTTTTCTTTACAAGAATCGATCGATATCAAAGAGGACAACGAGGATTTTGTCGACGATGAGAACACGACGTCGGAAGTACCGATCGACGCAAGAGAAACACGCGCGACGGGTTCGGACAACTGGGAAGACCAGTCGTTAGAAAGTAGAAGAATTCGTTCAGGTCACGATTCGTTCACTTGCGACTCGTGCAATGGGTCGTTCGCGACGAAGACACATCTCGacgtacatttaaaaatacactgtGAAGGAAAAGATCTCGGCGCGACGAAGTCGTACCATCAACGTGCGACTAAGAATGTCGACGTCTCCGACAGACCGTTTCCATGCGATCGATGCAAAATGTCGTTCTTGATGAGACATCAGTTACACAATCATATGTACCTCCATACTGGCGAGAAGCCGTTCAAGTGCGACACGTGCGGTATGTCGTTCGATAGTAATCAAAATTTAGACCAACACTCCTACGTGCATTCAAAAGAAAAGGGACTGTTCGCGTGCGATCTGTGCTCAAAATCGTTCTTAAACATCGAGCGTCTGGCCACGCACAAGAACCTTCACTTTGACAAACAACCGTTCAAGTGCgacgaatgcgaaaagtcgttttcgACCAACACATTTTTGGTCCGGCATAAGAGAGTTCACACGGATGGATACACGTCGTTCAAGTGCGACGAATGCGAAAAGTTGTTTTCGCACAACTCGATTCTGGTCCGGCATAAGAGAGTTCACACGGGTGAAAAACCTTTCAAGTGCgacgaatgcgaaaagtcgttttcgtCCAAAACAAATCTGGGTCAGCATAAGAAAGTTCACACGGGTGAAAAACCTTTCAAGTGCGACGAATGCGAAATGTCGTTTTCGTCCAAAACAAATCTGGGTAAGCATAAGATAGTTCACACGGGTGAAAAACCTTTCAAGTGCGACACATGCGGCATGTCGTTCAATTACAAAAGAAGTTTAGACCATCACTCCTacgtgcattccaaaaaaaagagaCCTTTCGCGTGCGATCTGTGCAAGAAATCGTTCTTCACCACCAAGCGTCTGGCCGCGCACAAGAACGTGCACCTTGACAAACAACCGTTCAAGTGCGATGAATGTGAAAAGTTGTTTTCGTGCAACTCGATTCTGGTCCAGCATAAGAGAGTTCACACGGGTGAAAAACCTTTCAAGTGTgacgaatgcgaaaagtcgttttcgtCCAAAACAAATCTGGGTAAGCATAAGATAGTTCACACGGGTGAAAAACCTTTCAAGTGCGACACGTGCGGTATGTCGTTTGCTCGGAAATACACATTAAACCTACACTCCTACatgcattccaaaaaaaagagaCCGTTCGCGTGCGATCTGTGCAAGAAATCGTTCTTCACCACCAAGTGTCTGGCCGCACACAAGAACGTGCACCTTGACAAACAACCGTTCAACTGCGacatgatttttgaaaaacaaatccAACTCTGA
Protein Sequence: MFTEPISIRAQKNDEPNIAKVKIEVDDEETNDERTQSCFSTSYERGSDENLRTYFSLQESIDIKEDNEDFVDDENTTSEVPIDARETRATGSDNWEDQSLESRRIRSGHDSFTCDSCNGSFATKTHLDVHLKIHCEGKDLGATKSYHQRATKNVDVSDRPFPCDRCKMSFLMRHQLHNHMYLHTGEKPFKCDTCGMSFDSNQNLDQHSYVHSKEKGLFACDLCSKSFLNIERLATHKNLHFDKQPFKCDECEKSFSTNTFLVRHKRVHTDGYTSFKCDECEKLFSHNSILVRHKRVHTGEKPFKCDECEKSFSSKTNLGQHKKVHTGEKPFKCDECEMSFSSKTNLGKHKIVHTGEKPFKCDTCGMSFNYKRSLDHHSYVHSKKKRPFACDLCKKSFFTTKRLAAHKNVHLDKQPFKCDECEKLFSCNSILVQHKRVHTGEKPFKCDECEKSFSSKTNLGKHKIVHTGEKPFKCDTCGMSFARKYTLNLHSYMHSKKKRPFACDLCKKSFFTTKCLAAHKNVHLDKQPFNCDMIFEKQIQL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -