Basic Information

Insect: Neoneuromus ignobilis
Gene Symbol: zfh1
Assembly: GCA_029203775.1
Location: CP092093.1:28677383-28679188[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.73 59 5.2 0.0 1 23 71 93 71 93 0.95

2 16 0.55 44 5.6 0.2 3 23 156 176 154 176 0.91

3 16 0.0029 0.24 12.8 2.9 2 23 181 203 180 203 0.92

4 16 0.043 3.5 9.1 0.1 3 23 209 229 208 229 0.95

5 16 1.9e-05 0.0016 19.6 0.5 2 23 231 252 230 252 0.97

6 16 0.00012 0.0094 17.2 0.9 1 23 266 289 266 289 0.98

7 16 0.12 9.4 7.7 1.2 1 23 296 318 296 318 0.96

8 16 2.6e-05 0.0021 19.2 1.2 1 23 324 346 324 346 0.97

9 16 0.1 8.4 7.9 3.7 1 23 350 372 350 372 0.97

10 16 0.0016 0.13 13.6 0.5 3 23 389 411 387 411 0.95

11 16 0.00027 0.022 16.0 0.6 3 23 419 439 417 439 0.98

12 16 0.00031 0.025 15.8 3.0 3 23 445 465 443 465 0.96

13 16 0.0038 0.3 12.4 0.9 1 23 471 493 471 493 0.97

14 16 5.2e-07 4.2e-05 24.6 1.0 1 23 499 521 499 521 0.99

15 16 6.9e-05 0.0056 17.9 1.3 1 23 527 550 527 550 0.95

16 16 0.089 7.2 8.1 0.1 2 23 552 574 552 574 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.73	59	5.2	0.0	1	23	71	93	71	93	0.95
2	16	0.55	44	5.6	0.2	3	23	156	176	154	176	0.91
3	16	0.0029	0.24	12.8	2.9	2	23	181	203	180	203	0.92
4	16	0.043	3.5	9.1	0.1	3	23	209	229	208	229	0.95
5	16	1.9e-05	0.0016	19.6	0.5	2	23	231	252	230	252	0.97
6	16	0.00012	0.0094	17.2	0.9	1	23	266	289	266	289	0.98
7	16	0.12	9.4	7.7	1.2	1	23	296	318	296	318	0.96
8	16	2.6e-05	0.0021	19.2	1.2	1	23	324	346	324	346	0.97
9	16	0.1	8.4	7.9	3.7	1	23	350	372	350	372	0.97
10	16	0.0016	0.13	13.6	0.5	3	23	389	411	387	411	0.95
11	16	0.00027	0.022	16.0	0.6	3	23	419	439	417	439	0.98
12	16	0.00031	0.025	15.8	3.0	3	23	445	465	443	465	0.96
13	16	0.0038	0.3	12.4	0.9	1	23	471	493	471	493	0.97
14	16	5.2e-07	4.2e-05	24.6	1.0	1	23	499	521	499	521	0.99
15	16	6.9e-05	0.0056	17.9	1.3	1	23	527	550	527	550	0.95
16	16	0.089	7.2	8.1	0.1	2	23	552	574	552	574	0.94

Sequence Information

Coding Sequence: ATGTCTcaagaaaatgaaattgttaagTATATACGCATTAAAACAGAACCGATTGTAACAGATGAATGCAGCTTGAAACGTAGTTATTTTGAAGCTGTTGAGAGCGAAAatgaaactttaaaaattataaagatagaTGCTAATGAAGATGAGGAATCGGAAAATAAACCTGAAATTGATCCACTtgaattgaaagaaattaaacCGATCTATCTTTGTCAGAAATGTGAAGTGATGCTCGATAATGATGAAGAATTGGCATTACACATTGCTCGTCATTCTGAAAATGTTAGTACTATATTGACTAATCCTCAGAtggaaaatgaaaacaatataagTGAATGTGTTATTGAAgaatcaaatagaaataaaaatgcaaCTGATTATGAGAAAATGTTAagttgtaatattataaaaccaGTAAAACAAAATCTAGTACAAGATactacaaaaattttatatggtTGTCCTATTTGTTCATGGTGGTTTGAAACAAAATCAGAATGGTTTTCACATAATGATAATCATTCATTGGAAATAAAATGTGATGAATGTGATCGAATGTTTTgccatgaaatttatttaaaagatcatAAACAAGATGAACACTATCCATTTGAAATGTGTTATCTTTGTGGACTTATTTTTCAAGATGAAAAATCACTTGATAAACATCTTGAAGAACATTTACAATGTGGCATATGTGATGAACGTTTCAAATCAAAACTTGCTTTAAAATCTCATCGCCGAATTCATggtatttcaaaaaaacaaaaaagatCTACTCAACCAAGATATAAATGTGATTCCTGtccaaaatattttgtaaaagaatcTAGCTTATTATATCATCAACAAACAGGTCAtgcagtaaatattttatcatatcgTTGCCATTTATGTGAAATGAGTTTTTTAAAAGGAGAagcattaaaatatcatatactcAACCATGATATGGGCGATAATTTCATATGTGAAATTTGTTCAAAAGAATTTAATAGAACTTGCAATTTAAATGCTCACATTGTTACacatataaaagattattattgTAAAGTTTGTTGTAGAAGTTATATTACACAATTTCGATTAGAAAATCATATGTCGGATCATAATGAGAAAGAAATTCGATTGGCAGAGAAACAACCTCATAGTGTAATGTGTCCTTTTGAAAACTGTGATATGACGTTTCCCTCACGTTTTCAATTATACGAGCATAAGAAAACACATCTCGGTATAGTTGAATTTGGTTGCGATGTATGTCCGAGAAAATTCAAAACTGAACCTCAACTCTTAACACATCGAAAATCACACGAAGCCGATACTGATTGTCGGACGTGtggaaaacatttttctaatgtAAAAACGTTAAGAGAACATTTACGTTTGCATACAGGTGAAAAACCATTTACTTGCGATGTTTGTGGTATGCGATTCCGATGTCAAAGTAGTTTGGTCGGTCATCGTGCTGTACACAGTactgagaaaaaatataaatgtagtaTTTGTGAACGTGCATTTGCAAGATCTAATTATCTTAAAGAGCATCTCCGAACTCATAGAAATGAAAGACCTTTTGAGTGTCAGTATTGTGGACAACGTTTCACTCAGTCTAATGTTCTTAAAACTCATGTGAATTTAAAACATCGAGTGTGTAATGTATGTAACGAAGTTATAGGTAATAAGGTTTTGTTACGAGAGCATTTAGTTAAATTTCACAATATTAGTATGAATGATAATTACTCATTGTCAAGAATGAAATTACCACGAAAGATTAGAGTAccaaaaagtaaacaattataA
Protein Sequence: MSQENEIVKYIRIKTEPIVTDECSLKRSYFEAVESENETLKIIKIDANEDEESENKPEIDPLELKEIKPIYLCQKCEVMLDNDEELALHIARHSENVSTILTNPQMENENNISECVIEESNRNKNATDYEKMLSCNIIKPVKQNLVQDTTKILYGCPICSWWFETKSEWFSHNDNHSLEIKCDECDRMFCHEIYLKDHKQDEHYPFEMCYLCGLIFQDEKSLDKHLEEHLQCGICDERFKSKLALKSHRRIHGISKKQKRSTQPRYKCDSCPKYFVKESSLLYHQQTGHAVNILSYRCHLCEMSFLKGEALKYHILNHDMGDNFICEICSKEFNRTCNLNAHIVTHIKDYYCKVCCRSYITQFRLENHMSDHNEKEIRLAEKQPHSVMCPFENCDMTFPSRFQLYEHKKTHLGIVEFGCDVCPRKFKTEPQLLTHRKSHEADTDCRTCGKHFSNVKTLREHLRLHTGEKPFTCDVCGMRFRCQSSLVGHRAVHSTEKKYKCSICERAFARSNYLKEHLRTHRNERPFECQYCGQRFTQSNVLKTHVNLKHRVCNVCNEVIGNKVLLREHLVKFHNISMNDNYSLSRMKLPRKIRVPKSKQL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00004865;
90% Identity: -
80% Identity: -