Basic Information

Insect: Neoneuromus ignobilis
Gene Symbol: -
Assembly: GCA_029203775.1
Location: CP092090.1:45376125-45380298[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.00016 0.013 16.7 1.4 1 23 163 185 163 185 0.94

2 15 0.0021 0.17 13.2 1.1 3 23 193 213 192 213 0.99

3 15 0.00017 0.014 16.6 0.1 1 23 327 349 327 349 0.98

4 15 0.25 20 6.7 0.1 1 23 355 378 355 378 0.96

5 15 5.8e-05 0.0047 18.1 3.5 1 23 405 427 405 427 0.98

6 15 0.15 12 7.4 0.0 1 23 440 462 440 462 0.95

7 15 0.027 2.2 9.7 0.3 1 23 468 491 468 491 0.93

8 15 0.056 4.5 8.7 0.6 3 19 500 516 499 517 0.94

9 15 6.4e-06 0.00051 21.1 4.6 1 23 526 548 526 548 0.98

10 15 0.0066 0.54 11.6 0.3 2 23 554 575 553 575 0.97

11 15 1.4e-05 0.0012 20.0 0.4 1 23 583 605 583 605 0.98

12 15 0.0062 0.5 11.7 0.2 3 23 613 633 611 633 0.97

13 15 0.0002 0.016 16.5 0.3 1 23 639 661 639 662 0.95

14 15 0.03 2.4 9.6 0.2 1 23 676 698 676 698 0.96

15 15 0.00086 0.07 14.4 0.1 1 20 1094 1113 1094 1116 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.00016	0.013	16.7	1.4	1	23	163	185	163	185	0.94
2	15	0.0021	0.17	13.2	1.1	3	23	193	213	192	213	0.99
3	15	0.00017	0.014	16.6	0.1	1	23	327	349	327	349	0.98
4	15	0.25	20	6.7	0.1	1	23	355	378	355	378	0.96
5	15	5.8e-05	0.0047	18.1	3.5	1	23	405	427	405	427	0.98
6	15	0.15	12	7.4	0.0	1	23	440	462	440	462	0.95
7	15	0.027	2.2	9.7	0.3	1	23	468	491	468	491	0.93
8	15	0.056	4.5	8.7	0.6	3	19	500	516	499	517	0.94
9	15	6.4e-06	0.00051	21.1	4.6	1	23	526	548	526	548	0.98
10	15	0.0066	0.54	11.6	0.3	2	23	554	575	553	575	0.97
11	15	1.4e-05	0.0012	20.0	0.4	1	23	583	605	583	605	0.98
12	15	0.0062	0.5	11.7	0.2	3	23	613	633	611	633	0.97
13	15	0.0002	0.016	16.5	0.3	1	23	639	661	639	662	0.95
14	15	0.03	2.4	9.6	0.2	1	23	676	698	676	698	0.96
15	15	0.00086	0.07	14.4	0.1	1	20	1094	1113	1094	1116	0.93

Sequence Information

Coding Sequence: ATGgatgaaagttttaatttgaattggGAGGATGGTCCTTCAGTTGCAACTCAAGAAGAAGTTATATGTAGTATTGAAAATGGCCAGTTGGAAGGAGCGCATAGTAATGAAGAATATGTGGATATGTGTGAAGAAGTTGTTGTTCAAGATATGGTGCATGAAACTGTTATAACAGATACACCTCAACCAGAAGCAGTAGTGGAAGAAGTGGTTTATATGCCAGATAATTATCAATCAGAGAATGTAGTATATATGCAAGATGAACATGTTCTTGTCGTTCAGCAAAATGAAGAAGTTGCTCTTAATGAACCGAATTATATGGAATGTCAAGTTACCGAAGAAGTGATTACAGATGGATGGGTTCAGCCACAAGCAGAGGAAAGAGTTGAAGTTATTGGTGATTTAAGTAATCAACAGGATCCAAATGCTGATGATTTGGATATACCTTTACCTGTTGATCAAGATGAATATACAGCAAGTAGGCCACATCCTTGTGATTTTTGTAGTCGAAGGTTCAGAAAAAaagcaaatttaataaatcacatgGTAGCTCATCAAACAGACAGGCCTCATGGGTGTAATCTTTGCGGTGCTCGATATATTCGAAAATGTGAtttaatgaatcatttaaaaattcatgcGTATGCACCTGAACCTGAAACTTATGAAGAAGAAGATGATGATCTGAATTTTCAAACTGAGTCAGATGAATATGAAAAACCACGCAAAAAGAAATCTAGTTCTAAAAAGCGTAGAACATATAAAgcaaaaattaaaagtgaacCCGAAGAAGAAAAATACATGACTACATCACgGTCGTATGACTATGTAGATGAAGATATGCGGTTATTGACAGAAATGGCTAATAATTCCAGCAGAACTTTTGATTATGATAATAGTGATTATAACGAAGCTATTCCACCAGAAAATCATCCAATTAGTGAACCAAGATATCCTATAACAGATCCTCGGAAACCTTTTGTTTGTCAACATTGTGGAGTAGGATTTGCTAGAGAAAAAGCTTTGGCTTCTCATGCAAGAATTCATGGAGGTGATAGTCCTTTTGAATGTGAAACATGTGGTGATATGTTTTGGGATTTAGCATTGTTGAAAGAACATGTACGAAATAAACATGGAGATGCAATTGGACGAGGGTCTTatgatgacgatgatgatgaaGATTATGTTGATGATGAAGAAAAATATGGAGATTTTTATTGTCAAACATGTGGAATGTCATTTCATAGGCAAGATCTTTTGAGGAGACATTCTCGAATACATATAAAAGAAGAGTATGTAAACGATTCAGAATTTGGTCACGTTTGTAATGTTTGTGGTGATTCATTTCCAGAAGCTTTAGATTTACTTGCTCATGCTGAAGTACATGCTCGGCTTGATATTCATCGCTGTATGTTATGTGGCGAAAGTTTTTCTGAAGAACAGGCGATGGCTACTCACATAGCGCAGCGTCATTCAAAAAATATGCCACCGAATTCTTGTATGCTTTGTGGAAAAGCATGTAAGGATAGACGAATGTTATTGAAACATGCATGGGAACATTCTAGAGAAAAAATTTTTTCCTGTTCTAAATGTGGAAaaagttttcataataaagcTCGTTTGAAACGTCATATGATGTCCCACAGAAATAAAGCAGTTACCTGTGACGTATGCGGAGAAGATTTTCCAGATGGTCGATCACTTATGAATCACCGCCACAGCCATAATAACGTTTCAGGCCGACAGTTTCCGTGTCGAGAATGTGGGAAAACATTTGGTTCCCGTAGTTCTCAACAAATTCATATTCGAATTCATACCGGCGAACGACCGTATGGCTGTCGTTTTTGTTGGAAAGCTTTCGCTGATGGAGGAACTCTTCGGAAACATGAACGTATTCATACAGGAGAAAAACCGTATGCTTGTGCTGTATGTCCACGAGCTTTTAACCAACGTGTTGTCTTACGTGAACATATCCGCTCGCATCATTCAGGACCGGATCCGAAGTATGGTACGAGTTTAACGCCTTATTATTGCACCGTTTGTAATGATCTTTTTACTACATCTCAAGATCTGATTCTTCATTTAATTGAACACTGTGATCTTAATACGGCTTTGAAACGACAACCACAAGTCGGTCCACGGAAATATAAAAGGCGTAGAAAACTAAAACCTCATGAACTAGAAAGGTTATCAAATAGAGTTGACAAAGAAGAACCAGAAGATAGAGGAAATATGTCCGATTCAGACgataatacaaaaagaaaacttggaaaaaggaacaaaaaatataaagctCCGATGGAAGACAACTATGAATCAGTTTTTCAGAGTTTTGAAAATGCTGTACAGACTatcaataatttagtaaattcaAAACCAAGTGCAAGAgggagaaagaaaaaaattattactcctAACGATACAGTTAGTTCTGTACAAAGACCAAAAATGATTCACACACAAAAAACTAGAGTTCCCGTTGAAATTAACACCGCAGATGGAAGTAAAATTCGTCataaaacaaaaacattaataactAGAACAACTCCAGCAGCAGTgtcatcaaatttaaataattttaattccgATACCTCACGaacgtattttaataatgaaaaaaacggTGAAAGAAATCGACCACGTACTAAAAATGTTAGTTATCATATTCTTCAACTTGAAAAATATCCACTAGCAACCTTTAATAATTCTggaaatgattatataaaagcTGAAGATTCTCgaatggaaaaattaaatgtcaatttagaaattaaacaaGAGGTAATAAGTAAAGAGAATAACATGGAATTTACAGCTGAAATGTTTAACGATATGATGAATGAAGATAATCCAAGTAATTCAACAATCGGTATTGATGGTAGTTTGAACGATCAAGTggcacaaaatattgaaataggAGAGTCTGTACCTGAAGCAGTTAATGAAGTTTGTATCGAGGATGGAGGTACTTCCATTTCTTGTAATTCGTTAAAAGGTGATAGTGATTTAAGTTTAGATCAGCCTTCAGTAAAAGGACGATCAAAATCAAAAGTAAAACCAGTTTCACTAAGTATTGTTAAAGTGGTAAAGAAAGGAAAGCGATCAGCCAGACATAATTCCTATGAGAAAATAGTGCAAATAGTAAAAACATCGGATGATTTGAATGAATCAGTGCTTCCTGATGTGCTTGCACAACCTACTGTTATTAAAACAGAGCCTATGGATACAACATCTTTACATGAACTTGCAGAACTTACAATGCAACATGCCCAAAACCAGTTCAAATGTGAAATGTGCAGCGAAACATTCACGAATCGTGCTGATTTACTCCTCCATGTACCGATACACATCTGA
Protein Sequence: MDESFNLNWEDGPSVATQEEVICSIENGQLEGAHSNEEYVDMCEEVVVQDMVHETVITDTPQPEAVVEEVVYMPDNYQSENVVYMQDEHVLVVQQNEEVALNEPNYMECQVTEEVITDGWVQPQAEERVEVIGDLSNQQDPNADDLDIPLPVDQDEYTASRPHPCDFCSRRFRKKANLINHMVAHQTDRPHGCNLCGARYIRKCDLMNHLKIHAYAPEPETYEEEDDDLNFQTESDEYEKPRKKKSSSKKRRTYKAKIKSEPEEEKYMTTSRSYDYVDEDMRLLTEMANNSSRTFDYDNSDYNEAIPPENHPISEPRYPITDPRKPFVCQHCGVGFAREKALASHARIHGGDSPFECETCGDMFWDLALLKEHVRNKHGDAIGRGSYDDDDDEDYVDDEEKYGDFYCQTCGMSFHRQDLLRRHSRIHIKEEYVNDSEFGHVCNVCGDSFPEALDLLAHAEVHARLDIHRCMLCGESFSEEQAMATHIAQRHSKNMPPNSCMLCGKACKDRRMLLKHAWEHSREKIFSCSKCGKSFHNKARLKRHMMSHRNKAVTCDVCGEDFPDGRSLMNHRHSHNNVSGRQFPCRECGKTFGSRSSQQIHIRIHTGERPYGCRFCWKAFADGGTLRKHERIHTGEKPYACAVCPRAFNQRVVLREHIRSHHSGPDPKYGTSLTPYYCTVCNDLFTTSQDLILHLIEHCDLNTALKRQPQVGPRKYKRRRKLKPHELERLSNRVDKEEPEDRGNMSDSDDNTKRKLGKRNKKYKAPMEDNYESVFQSFENAVQTINNLVNSKPSARGRKKKIITPNDTVSSVQRPKMIHTQKTRVPVEINTADGSKIRHKTKTLITRTTPAAVSSNLNNFNSDTSRTYFNNEKNGERNRPRTKNVSYHILQLEKYPLATFNNSGNDYIKAEDSRMEKLNVNLEIKQEVISKENNMEFTAEMFNDMMNEDNPSNSTIGIDGSLNDQVAQNIEIGESVPEAVNEVCIEDGGTSISCNSLKGDSDLSLDQPSVKGRSKSKVKPVSLSIVKVVKKGKRSARHNSYEKIVQIVKTSDDLNESVLPDVLAQPTVIKTEPMDTTSLHELAELTMQHAQNQFKCEMCSETFTNRADLLLHVPIHI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00004853;
90% Identity: iTF_00004853;
80% Identity: -