Basic Information

Insect: Neoneuromus ignobilis
Gene Symbol: -
Assembly: GCA_029203775.1
Location: CP092096.1:4263163-4266835[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 2.7 2.2e+02 3.4 6.9 3 23 139 159 139 160 0.96

2 14 0.93 75 4.9 0.0 1 23 163 186 163 186 0.94

3 14 1.2e-05 0.00099 20.2 0.0 1 23 229 251 229 251 0.97

4 14 0.0034 0.28 12.6 5.6 1 23 257 279 257 279 0.98

5 14 4.4e-07 3.6e-05 24.8 0.5 1 23 287 309 287 309 0.99

6 14 6e-07 4.8e-05 24.4 1.5 1 23 319 341 319 341 0.97

7 14 0.028 2.2 9.7 1.3 3 23 349 369 347 369 0.95

8 14 4.3e-06 0.00034 21.7 0.3 1 23 375 397 375 397 0.98

9 14 0.00053 0.043 15.1 0.7 1 23 403 425 403 425 0.96

10 14 3.1e-07 2.5e-05 25.3 2.4 3 23 433 453 431 453 0.96

11 14 6.2e-08 5e-06 27.5 0.1 2 23 459 480 458 480 0.98

12 14 2.1e-05 0.0017 19.5 1.4 1 23 486 508 486 508 0.97

13 14 6.4e-05 0.0052 18.0 0.1 3 23 516 536 514 536 0.97

14 14 7.3e-05 0.0059 17.8 2.6 1 23 542 564 542 564 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	2.7	2.2e+02	3.4	6.9	3	23	139	159	139	160	0.96
2	14	0.93	75	4.9	0.0	1	23	163	186	163	186	0.94
3	14	1.2e-05	0.00099	20.2	0.0	1	23	229	251	229	251	0.97
4	14	0.0034	0.28	12.6	5.6	1	23	257	279	257	279	0.98
5	14	4.4e-07	3.6e-05	24.8	0.5	1	23	287	309	287	309	0.99
6	14	6e-07	4.8e-05	24.4	1.5	1	23	319	341	319	341	0.97
7	14	0.028	2.2	9.7	1.3	3	23	349	369	347	369	0.95
8	14	4.3e-06	0.00034	21.7	0.3	1	23	375	397	375	397	0.98
9	14	0.00053	0.043	15.1	0.7	1	23	403	425	403	425	0.96
10	14	3.1e-07	2.5e-05	25.3	2.4	3	23	433	453	431	453	0.96
11	14	6.2e-08	5e-06	27.5	0.1	2	23	459	480	458	480	0.98
12	14	2.1e-05	0.0017	19.5	1.4	1	23	486	508	486	508	0.97
13	14	6.4e-05	0.0052	18.0	0.1	3	23	516	536	514	536	0.97
14	14	7.3e-05	0.0059	17.8	2.6	1	23	542	564	542	564	0.99

Sequence Information

Coding Sequence: ATGATTCCAATATTTGGAAAGTCAGCAGAAGATGAATCTCATGATTCAAATTTGGCAATGAAAATAATGGCATGCGCTACAGTAAAAttAAGTCGTGAAGATGGACTTCCGGGAACTGTTTGTCTTAATTGTTACCAGAAAATAAATGATGCTTATTCATTCAAATGTTTATGTGAAGAAtcgaatcattttttaataaactatttttctaATACAACTAAAAACGGTGTTATTTCGGTTACTAATCGATGCGAGGCTGATAAAAAACTTGAACTAGTCGATGCTCAAGAGGTCAAGAGATCAGATCGAGATCTCGCCAATGACTTTGATGATAAAAACGATATGATGGAAAACACTGACGAACTGGAGCGAATAGAAAATGATTCAGCTGTTGAAAAGCGTTCAGATTTAGGGTGCAAGCTGTGTTCAGAAGTTTTATGTAATTCTGAGAAATTATTGAATCACTATCATCGTCATCATGGCGCTCATGCTTGTAGCACTTGTCTCGATGTTTTCGCTGGATCTGCCGAGTTGATCGATCATGTGAAGATTGTGCATGAATCAGAACCCTGCCTGTATTGTCATATATGTTACAAGTGGTTTCGATGTAAAGCAAGATTCGTGAATCACAAACATTCTTATAGGAAAGATGTACCGAAAACTAACAGTGACTACGACGGAAGATTCGTTTGCGTCGTGTGTAATAAGTCGTATGCAAAACCGAAAAACCTCGAGGCTCATATGGGCGTACATTCCGGTGACAAGCCGTTCGTATGCCTAACGTGCGGTAAACGGTTCTGCCAGAGCCGTGCGTACGCGTGCCATATGAGAACGCATGCGGATTCGAACGGCAGAAGATACGAATGTTCAGAGTGTGGCGAAcggtttgaaaaaaatagcCGATTGACCGCACATATGAGAATGCACGGAGATATTGCCGCACAGTCTGTATCTCACGTCTGCAGCGTATGCGGGAAGAGTTACTGTAACGCTGGAAATTTGGCATCGCACATGCGACTTCACACGGGCGAAAAGCCGTACGGCTGCAACGTGTGCGGTAGGCGTTTTGCACAGAGCAATGCGCATTCGTATCATATGAAGTTACATTCGGGCGAACGGCCATACAAGTGCGATGCGTGTCCGAAGGCGTTCACGACGAACGGTCAGCTCGTCAATCACAGGCGACTCCACACCGGCGAAAAGCCGTTCGAGTGCGGCGTATGCGGTAAACGGTTCACGCAGAAGGTCGCTCACACCGTTCACGCGATGACTCACACCGGTGATAAGCCACATTTATGTAACGTGTGCGGCAAGACCTATTATCAGAGTAGCCAATTGACTGAACATATGAGAACCCATACGGGCGCGTCCGTTCAGTGTAGCGTGTGCGGAAAGAGTTACACTACGGCGGGAAATCTCGCCGCTCACATGAAGACGCATACGGGATCTAAATCGCACGTGTGTCGAATCTGCGACAAGGGATTTTATTTCGCGAACAAGCTCGCTAAACACATGCGCGTTCATACCGGAGAAAGACCGTTCGGATGCATGGAATGTCCAAAGAGGTTCGCCAGCGCTGATGTATTAAACGTGCACATGCGCGTGCATACGGGTCAACGGCCGTACAGATGTAACGAGTGCGAAAGAGCGTTCGCGACGAATTCGCAGCTTAGATGCCACGTGAAGACGCACGATGCTCGGAAATGTATTTCTCATGAGCCCCGGACAAAAACGACCGATTTAGAAAAACATCGATTGAAAACAGAAGAGCCACTTTGCCTCTCGAGTAGTACGTAG
Protein Sequence: MIPIFGKSAEDESHDSNLAMKIMACATVKLSREDGLPGTVCLNCYQKINDAYSFKCLCEESNHFLINYFSNTTKNGVISVTNRCEADKKLELVDAQEVKRSDRDLANDFDDKNDMMENTDELERIENDSAVEKRSDLGCKLCSEVLCNSEKLLNHYHRHHGAHACSTCLDVFAGSAELIDHVKIVHESEPCLYCHICYKWFRCKARFVNHKHSYRKDVPKTNSDYDGRFVCVVCNKSYAKPKNLEAHMGVHSGDKPFVCLTCGKRFCQSRAYACHMRTHADSNGRRYECSECGERFEKNSRLTAHMRMHGDIAAQSVSHVCSVCGKSYCNAGNLASHMRLHTGEKPYGCNVCGRRFAQSNAHSYHMKLHSGERPYKCDACPKAFTTNGQLVNHRRLHTGEKPFECGVCGKRFTQKVAHTVHAMTHTGDKPHLCNVCGKTYYQSSQLTEHMRTHTGASVQCSVCGKSYTTAGNLAAHMKTHTGSKSHVCRICDKGFYFANKLAKHMRVHTGERPFGCMECPKRFASADVLNVHMRVHTGQRPYRCNECERAFATNSQLRCHVKTHDARKCISHEPRTKTTDLEKHRLKTEEPLCLSSST

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -