Basic Information

Insect: Neoneuromus ignobilis
Gene Symbol: -
Assembly: GCA_029203775.1
Location: CP092098.1:3102985-3105762[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 8e-05 0.0065 17.7 4.4 1 23 235 257 235 257 0.98

2 15 0.00037 0.03 15.6 0.7 3 23 265 285 263 285 0.97

3 15 1.8e-06 0.00015 22.9 3.2 1 23 291 313 291 313 0.99

4 15 6.9e-06 0.00056 21.0 1.0 1 23 319 341 319 341 0.99

5 15 2.5e-06 0.0002 22.4 1.5 1 23 347 369 347 369 0.98

6 15 0.00014 0.012 16.9 0.6 1 23 375 397 375 397 0.98

7 15 6.5e-06 0.00053 21.1 3.8 1 23 403 425 403 425 0.97

8 15 0.00018 0.014 16.6 4.8 1 23 431 453 431 453 0.99

9 15 3.2e-06 0.00026 22.1 2.0 1 23 459 481 459 481 0.98

10 15 0.0002 0.016 16.4 1.3 1 23 487 509 487 509 0.98

11 15 2.2e-06 0.00018 22.6 2.7 1 23 515 537 515 537 0.98

12 15 2.7e-05 0.0022 19.2 3.1 1 23 543 565 543 565 0.99

13 15 5.1e-05 0.0041 18.3 0.6 1 23 571 593 571 593 0.93

14 15 4.4e-05 0.0036 18.5 1.2 3 23 601 621 599 621 0.97

15 15 6.9e-06 0.00056 21.0 5.0 1 23 627 649 627 649 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	8e-05	0.0065	17.7	4.4	1	23	235	257	235	257	0.98
2	15	0.00037	0.03	15.6	0.7	3	23	265	285	263	285	0.97
3	15	1.8e-06	0.00015	22.9	3.2	1	23	291	313	291	313	0.99
4	15	6.9e-06	0.00056	21.0	1.0	1	23	319	341	319	341	0.99
5	15	2.5e-06	0.0002	22.4	1.5	1	23	347	369	347	369	0.98
6	15	0.00014	0.012	16.9	0.6	1	23	375	397	375	397	0.98
7	15	6.5e-06	0.00053	21.1	3.8	1	23	403	425	403	425	0.97
8	15	0.00018	0.014	16.6	4.8	1	23	431	453	431	453	0.99
9	15	3.2e-06	0.00026	22.1	2.0	1	23	459	481	459	481	0.98
10	15	0.0002	0.016	16.4	1.3	1	23	487	509	487	509	0.98
11	15	2.2e-06	0.00018	22.6	2.7	1	23	515	537	515	537	0.98
12	15	2.7e-05	0.0022	19.2	3.1	1	23	543	565	543	565	0.99
13	15	5.1e-05	0.0041	18.3	0.6	1	23	571	593	571	593	0.93
14	15	4.4e-05	0.0036	18.5	1.2	3	23	601	621	599	621	0.97
15	15	6.9e-06	0.00056	21.0	5.0	1	23	627	649	627	649	0.98

Sequence Information

Coding Sequence: ATGTTAAGTGAAACGTGCAAGGCGTGTTTATCGTTATTACACAGGCTGTTTCAACTGATCTTCAGGTATAACGTCTCCTCTATACAAAGCACTGAGTGGCCGTTCATCCCGGACGATCCGTGTACAAACGCACGAGAAGAAATCAATTCTGTATACGGACGTGAACGATCAAATCGCTATCTTTTCTTATATTCGGACCGTCGGAATATGGAAGGAGTAACATTGAAAGCGTTGAGTGAAATGTGTAGAGTATGTTTATCGAATACGAAATGTATGAGGGATATATTTCAGGAGAAGTGTTCGAATAATATAAGTCTCGTTAACGTTCTAACGGAATGCACTTCGATTCAAATCTCGTCGAACGACGGCTTACCGTCTATCATCTGCGACAGCTGCACGGACAGTCTAGAAACGTTCATACGTTTCAAACGTCGGTGTTCGGAATCGAAAAAGATACTCGAACGATACCGAGACAATCTGCTCGTCAATCACAAGACCGAAACCGAGAGCTCGGCGTTCGATTTCGTAAAAACCGAACGATCCGACGACAGTCCGAGCGACGGCGACCGGATCGTCGACGTGAAAGCCGAAGACGATCTCGACACCGACGGCGGCGATTTCTTCCCGCTCGACAAAATCGACATCGACGACGTACCGATCGCCCGCCTGAAAGAAGAAAAAACGTCCGATCTCCGCAGACCGTTCGAGTGCGAGTTTTGTCATAAATCGTTCACGTTGAAACGGAACCTCGACACGCACCGTCGCGTGCACACGGACGACCGTCCGTTCGGCTGCGACGTGTGCGGCAAGTCGTTCACGTTGAAGCACGTGCTCGAGGTGCACTCGAGGATCCACACCGGCCAGCGGCCGTACACGTGCACGGTCTGCGACAAGTCGTTCACGATCGAGCACAACCTGAAGAAGCACACGAGGGTGCACACCGGCGAGCGGCCGTACAAGTGCGAGATATGCGGCAAGTCGTTCACGCTCAAGCACGTGCTCGACGCGCACGCGAGGACGCACTCCGGCGAACGGCCGTTCATGTGCGACGTCTGCACGAAGACGTTCTCGCTGAAGAGGAACCTCGAGACGCACCAGCGGATACACACGGGGGAGAGGCCGTACAGATGCGGCGTGTGCGATAAGTCGTTCACGTTGAAGCACGTGCTCGACGCGCACGCGAGGATACATTCCGGAGAACGTCCGTTCGCGTGTCACGTGTGCGAGAAGGCGTTCACGATCAAGCACAACCTGAAGAAGCATCTCCGGATCCACACCGGCGAGCGGCCGTTCAAGTGCCACGTCTGCTCGAAATCGTTCACGTTGAAGCACGTGCTCGACGCGCACCTCCGCACGCACTCCGGCGAACGTCCGTTCATGTGCGACGTGTGCACGAAAACGTTCTCGCTGAAGAGGAACCTCGAGACACACCAACGCAGCCACACGAACGAGCGTCCGTTCCGGTGCCCGATCTGCTCGAAGTCGTTCACGCTCAAGCACGTGCTCGACGCGCACTCGCGCGTCCACTCCGGCGAACGTCCGTTCACGTGCGACGTGTGCACGAAGTCGTTCACGATCAAGCACAACCTGATCAAGCATCTGCGGATACACACCGGCGAGCGGCCGTACAAGTGCCACGTGTGCGAGAAGGCGTTCACGCTCAAGCACACGCTCGACGCGCACCTCAGGATACACAGCGGCGAGCGGCCGTTCGTGTGCCGCGTGTGCTCGAAGGCGTTCTCGCAGAAGCGCAACCTCGAGACGCACTCGGTCGTGCACTCGGACGCGAGGCCGTTCGGCTGCGACAAGTGCGACAAGACGTTCGCGCTCAAGCACAACCTGAAGGCGCACTACGCGATACATTCGGACGACGCGAGGCACAGGTGCGCGCTGTGCTCGAAGGCGTTCAGGCACGATTCGAACCTGAGGAACCACATGCGGACGCACGAGAAGAAACCGTTCGACGACGAGAAGAAGCCGCACGACTGA
Protein Sequence: MLSETCKACLSLLHRLFQLIFRYNVSSIQSTEWPFIPDDPCTNAREEINSVYGRERSNRYLFLYSDRRNMEGVTLKALSEMCRVCLSNTKCMRDIFQEKCSNNISLVNVLTECTSIQISSNDGLPSIICDSCTDSLETFIRFKRRCSESKKILERYRDNLLVNHKTETESSAFDFVKTERSDDSPSDGDRIVDVKAEDDLDTDGGDFFPLDKIDIDDVPIARLKEEKTSDLRRPFECEFCHKSFTLKRNLDTHRRVHTDDRPFGCDVCGKSFTLKHVLEVHSRIHTGQRPYTCTVCDKSFTIEHNLKKHTRVHTGERPYKCEICGKSFTLKHVLDAHARTHSGERPFMCDVCTKTFSLKRNLETHQRIHTGERPYRCGVCDKSFTLKHVLDAHARIHSGERPFACHVCEKAFTIKHNLKKHLRIHTGERPFKCHVCSKSFTLKHVLDAHLRTHSGERPFMCDVCTKTFSLKRNLETHQRSHTNERPFRCPICSKSFTLKHVLDAHSRVHSGERPFTCDVCTKSFTIKHNLIKHLRIHTGERPYKCHVCEKAFTLKHTLDAHLRIHSGERPFVCRVCSKAFSQKRNLETHSVVHSDARPFGCDKCDKTFALKHNLKAHYAIHSDDARHRCALCSKAFRHDSNLRNHMRTHEKKPFDDEKKPHD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00004814;
90% Identity: -
80% Identity: -