Nign008357.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Neoneuromus ignobilis
Gene Symbol
ZNF784
Assembly
GCA_029203775.1
Location
CP092089.1:25598111-25604441[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 22 0.00071 0.058 14.7 0.1 2 23 210 231 209 231 0.96
2 22 2.3e-05 0.0018 19.4 3.6 1 23 239 261 239 261 0.97
3 22 2.4e-05 0.0019 19.3 0.3 1 23 267 289 267 289 0.99
4 22 0.00012 0.0099 17.1 0.6 2 23 295 316 294 316 0.97
5 22 2.2e-05 0.0018 19.4 1.2 1 23 321 343 321 343 0.98
6 22 9.2e-05 0.0075 17.5 2.8 1 23 349 372 349 372 0.97
7 22 1.2 97 4.5 0.1 2 23 381 399 380 399 0.90
8 22 0.064 5.1 8.6 2.0 1 23 405 428 405 428 0.96
9 22 0.03 2.5 9.6 0.8 1 23 441 463 441 463 0.92
10 22 1.9e-05 0.0015 19.6 1.2 1 23 469 491 469 491 0.97
11 22 0.00039 0.031 15.5 0.1 2 23 701 722 700 722 0.97
12 22 2.3e-05 0.0019 19.4 5.0 1 23 730 752 730 752 0.98
13 22 0.00061 0.049 14.9 0.3 1 23 758 780 758 780 0.99
14 22 0.0029 0.23 12.8 0.2 2 23 786 808 785 808 0.94
15 22 7e-05 0.0057 17.9 1.1 1 23 813 835 813 835 0.97
16 22 7.4e-05 0.006 17.8 2.7 1 23 841 864 841 864 0.97
17 22 5.6 4.5e+02 2.4 0.5 3 23 873 890 872 890 0.71
18 22 4.8e-05 0.0039 18.4 0.9 1 23 896 919 896 919 0.95
19 22 0.00095 0.077 14.3 3.5 1 23 930 952 930 952 0.96
20 22 2.5e-05 0.002 19.3 1.1 1 23 958 980 958 980 0.98
21 22 0.0011 0.09 14.1 4.0 1 23 986 1008 986 1008 0.99
22 22 4.7e-08 3.8e-06 27.8 1.9 1 23 1014 1036 1014 1036 0.98

Sequence Information

Coding Sequence
ATGTTACGAATTTCTACAAAAATCAAGatattaaaaaatgatggtTTGCCACAGTTAATATGTTCTGATTGCTCTGAGCAAACTCGTaaatcatttgattttaaaatgttatgtgAAAAGTCTGATAGAATTTTACATGAAATTCTAAACAATGCCAGAactcaaattatttcaaaatctgAATGTGTTCGAACAGAAAGCGaattaaatgagattaaaatagaaaatggtCTAAGTGAAATTAAAGCAGAATCAAATGCAGCATCTGACTGTAAACAGACTGAAGTTTCTTATAGTTTAAAGaccaattataaaaatgaagttgaattaaatcaagaaaattccaaaaaaacactTGATAGTAAATATTCTTTACTGAATGATAATACACCATTGAATTCACTAGAATTTGATACTATAAAAGAGGAAATAAAAGATTCTAATGAAAATTCAGATGATGGAAGATCAATGTCAGATTGTtcagatgatgtttttttaataaatgtgttaaaatcaaaatcaagCGAGTCTAAAGATTTGATTAAATCAGAAAAGGAGTCAATAACAAGTGTACGTGTAAAAAAAGCTTTAAATATGGGTATAGATAAATGTGATCCTTCAACTTTAACATGTAAAATTTGCAATAAAGTGCTTGTCAATATTTATTCACTTGGTAGACATATGGAAGTACATGATGAAGGTCGTGAATTTAGACATATATGTAATGTTTGTAAAAAaggattttatgaaaaaagtcaGTTAACAAAACATTTACGTAGACATCGTGGTGAAACAAGGTATAAGTGTGAATTATGTTCAAAAGCTTTTTATGAACTTAGTGCATTAGCCGTACAtatgaaaaaacataatattgatccattgaaatgcacattctgtgataaaatattttatgtacaacaaCAATTAGAAGCACATGCAAAAACACATAACTCAGAAACATTTAAATGTGGAGAATGTAGTAAAGAATTTAGAACTGCAAAATATTTACAGTCTCATCGATTAGTACATGTAAaggtACGAATGTTTTCATGTCTGCTGTGTGACAAATCATTTAAAGATGACTCAGCATTACGAAATCACCATAAACGAATGCATGTAGGAATACCTCGTGAACCCGATGTGTGTGCTGTGTGTGGTAAAGCAGTTAAATTATTGGCTCGTCATATGTTACGCCATGGCGGTGAAAGACCTTACAAATGTGAGAGATGTCCACGGGCTTTTCTTCGTAAATGTGATTTAGATGATCATACTCGAGCACGTCATCGTGATGCAGATAGCGATGACAAAAGGTCTTATCCATATTTGTGTGCTGCTTGTGGTAAACGATGTGCATCAACAACACAGTTAAGAGTTCATACTCAAGCTCATACAGGAGAACGACCATTTGCATGCCGATTATGTGATAAACGTTATAgaacaaattttttattaactgcaCATATTCGTAGTCATACTGAAGAACGACCATTTGTGTGTGATgtAACAAAAACAGATGGACTTCCTGAATTAATTTGTTCAGATTGTTCTGAACAAATAGTTAAAACTGATAAAAGTccaaaaagtgaacaatgtaCCATTATTGAAGACAAAATTGAACAAATAGAACCTGTCGCtaacgaaatattaaatattaaaacagaagTGAAGGCTGCTGGAGATGAATCATTTGAAGGATTCAACGGATATACAGAAATACTTGatccagaaaaaataaaaccagaCCTTTTTGAAAATCAAGAAGTACAGGCAACTGAAATTAATGATACGGTTTGTGATGATGTGAAAGATGAAGACAATGGATTTTCATCAGATGAAGTTTCCTATGAAGATTCTTCAAAGCTTGATAATAATGAAGATGAAATTTCTGCAAATTCTAAATATGTAAGTGATGAGCAGGGAGATCTGAAACCAGTTAGGAAAAAAAGTTCAGATTCTTGTGCATCAGATGATTTTTTTGGACCTCCAAATAGTGGTATTTTAAATTCTACATTTGATAATGCAGAAAAACAATCAATAACAGGAATGCGTGTAAAAAAGGCAATAATGATGGGTCCTGAAATGTGTGATCCTACAACTCTAACTTGCAAAATTTGTGACAAGGttcttgttaatatttactCATTAGGTAGACATATGGAAATGCATGATGATGATAGAGAGTTTAGGCATACATGTCATGTTTGCAATAAAGGTTTTTATGAAAAGGGACAGCTTACTAAACATATTCGAAGACATAAAGGAGAAACACGATATAAATGTGAATTGTGTTCAAAGGGTTTTTATGAACTGAGCGCTGTTGCAGTACATATGAAAAAACATAAAGTGAAGCCAACGCCCTGTCCAACATGTAAAAAACCTTTTTATGTTCGACAACAACTTGAAATTCATGTAGCGAAAAAACATCCGACAGATCGACACACTTGCGCCAAGTGTGGTAAAGAGTTTCAGAATGCACGTTATCTTCAGGTTCATCAATTGGTTCATGTGAAAGTACGCATGTTTCCTTGTTTACTTTGTGACAAATCATTCAAAAATGATGAAAGTCTTCGTAAGCATCACAAAAGAGTACATGTTGAAGAACCAAAACTTGAAATATGCAATGTTTGTGGAAAAGCTGTTAAGTTAATGAAAACACATCTAATGAAACATAGTGGTGAAAGGCCTTTTAAATGTGAGCAGTGTCCTCGAGCATATATATCTAAATCACAGCTTAAATCTCATCGAGATGTAAAACATGGTGATGGAGCTAGAACTAGAAAATATCCTTTCTTGTGTAGTATTTGTGGGAAACCATGTCAGACAACAACACAACTAAGAAATCATACTAGAAAACATACAGGAGAAAGGCCATTTAATTGTCGAttatgtgataaaaaatataaaactaatggaGCACTTACAATTCATTTGAGATCTCATACTGAAGAAAGACCATATGTTTGTGATGTATGTCATAAAGGTTTCTATACGagtacaattttaaaacatcatGTAAGAACACATACAGGTGAAAGACCACATAAGTGTGATATATGTGGTCGTGCGTTTTCACAAAATTCGTCGCTTAAAACACATATGAAGGTACATTAG
Protein Sequence
MLRISTKIKILKNDGLPQLICSDCSEQTRKSFDFKMLCEKSDRILHEILNNARTQIISKSECVRTESELNEIKIENGLSEIKAESNAASDCKQTEVSYSLKTNYKNEVELNQENSKKTLDSKYSLLNDNTPLNSLEFDTIKEEIKDSNENSDDGRSMSDCSDDVFLINVLKSKSSESKDLIKSEKESITSVRVKKALNMGIDKCDPSTLTCKICNKVLVNIYSLGRHMEVHDEGREFRHICNVCKKGFYEKSQLTKHLRRHRGETRYKCELCSKAFYELSALAVHMKKHNIDPLKCTFCDKIFYVQQQLEAHAKTHNSETFKCGECSKEFRTAKYLQSHRLVHVKVRMFSCLLCDKSFKDDSALRNHHKRMHVGIPREPDVCAVCGKAVKLLARHMLRHGGERPYKCERCPRAFLRKCDLDDHTRARHRDADSDDKRSYPYLCAACGKRCASTTQLRVHTQAHTGERPFACRLCDKRYRTNFLLTAHIRSHTEERPFVCDVTKTDGLPELICSDCSEQIVKTDKSPKSEQCTIIEDKIEQIEPVANEILNIKTEVKAAGDESFEGFNGYTEILDPEKIKPDLFENQEVQATEINDTVCDDVKDEDNGFSSDEVSYEDSSKLDNNEDEISANSKYVSDEQGDLKPVRKKSSDSCASDDFFGPPNSGILNSTFDNAEKQSITGMRVKKAIMMGPEMCDPTTLTCKICDKVLVNIYSLGRHMEMHDDDREFRHTCHVCNKGFYEKGQLTKHIRRHKGETRYKCELCSKGFYELSAVAVHMKKHKVKPTPCPTCKKPFYVRQQLEIHVAKKHPTDRHTCAKCGKEFQNARYLQVHQLVHVKVRMFPCLLCDKSFKNDESLRKHHKRVHVEEPKLEICNVCGKAVKLMKTHLMKHSGERPFKCEQCPRAYISKSQLKSHRDVKHGDGARTRKYPFLCSICGKPCQTTTQLRNHTRKHTGERPFNCRLCDKKYKTNGALTIHLRSHTEERPYVCDVCHKGFYTSTILKHHVRTHTGERPHKCDICGRAFSQNSSLKTHMKVH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
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