Nign029649.1
Basic Information
- Insect
- Neoneuromus ignobilis
- Gene Symbol
- -
- Assembly
- GCA_029203775.1
- Location
- CP092098.1:5226845-5228200[+]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 10 0.084 3.4e+02 2.2 0.9 14 30 18 36 10 42 0.77 2 10 0.0052 21 6.1 1.2 18 38 50 67 47 72 0.82 3 10 0.00021 0.83 10.5 5.2 14 41 74 98 66 100 0.85 4 10 7.6e-05 0.31 11.9 1.5 14 41 102 126 98 129 0.89 5 10 5.9e-05 0.24 12.3 5.2 13 41 129 154 125 155 0.86 6 10 0.00026 1.1 10.2 1.3 17 41 161 182 155 184 0.87 7 10 0.0021 8.3 7.3 1.9 14 41 186 210 181 212 0.83 8 10 0.37 1.5e+03 0.1 0.8 14 38 214 240 202 244 0.80 9 10 0.11 4.4e+02 1.8 3.5 17 29 246 258 239 295 0.87 10 10 0.004 16 6.4 2.1 12 44 327 356 291 356 0.92
Sequence Information
- Coding Sequence
- atgcgtgatgggcctcactacccctctacCCTATGCTCTATTCACGCGACCAAACGACGTTTTCGATGCGACGCGTGCGGAAAGTCGTTCAAGACGAAACCATCGCTCCACACACACTCGAAGATCCACGTCGAGGTACGTCCGAACGTGTGTGAGATTTGCACGAAAGCGTTCTCGTCGAAGAGTACCCTCAACCGCCATAAGAAGACACATACGGGCGAGAAAGCGTACGAGTGCAACCATTGCCAGAAAGCGTTCCGGTCGAGCCACAACCTCAAAGTGCATATCAGAACGCACACGGGCGAGAAAGCGTACGAGTGCGACCATTGCCAGAAAACATTCCGGTCGGGCAGCAACCTCAAAGTGCATATCAGAACGCACACGAGCGAAAAAGCGTACGAGTGCAACCATTGCCAGAAAACGTTCCGGTCGAGCCACAACCTCAAAGTGCATATCAGAACGCACATGGGCGAGAAACCGTACGAGTGCGACCATTGCCAGAAAGCGTTCCGGTCGAGCAGCAACCTCAAATTGCATATCAGAACGCACACGGGCGAGAAAGCGTACGAGTGCGACCATTGCCAGAAAACGTTCCGGTCGAGCAGCGTCCTCAAAATACATATCAGAACGCACACGGGCGAGAAACCGTACGAATGTGCGTTGTGTCTCCGGACGTTTGGGCAGAAGTTCACGCTCGGCATTCATTCGATGAGGGTCCACACCGCAATCAGAAATTACAAGTGCGGCATTTGCAGTAAAGCGTTCTCGACCAAGTACGGTCTGAAGTTGCATGTGCGTATGCATACCGACGAACGTCCGTACAGGTGCGACTGGTGCGACGGTACGTTCCGTACGAGGACGGTGCTCGTTCGTCACGTGCGCGTCCACAGCGGCGACAAGCCGTTCGAGTGCGATTTCTGCGACCGCGCGTTCTCACTGAAGCGGAATCTCCAGATACACCGGCGCATGCACACGAAGGAGAATGAGAATTCGTTTGCATGCGACGTCTGCGGGAAACGACTGATGTGGAAGCGGAACCTGCGGTGGCATCTCGCGTCAGAACATCCGGAAATGCAAGAGAACGCCGAAATAAAACTTGATTCGATCGAAAAACCTTCCGTACGCACTCGTTCGGGAAGAATTTCAAGGAAGAACATCATCTCGCAGCTCACGGAAAAGAACGAATCTAAATCGAATGAAAGACCGTAG
- Protein Sequence
- MRDGPHYPSTLCSIHATKRRFRCDACGKSFKTKPSLHTHSKIHVEVRPNVCEICTKAFSSKSTLNRHKKTHTGEKAYECNHCQKAFRSSHNLKVHIRTHTGEKAYECDHCQKTFRSGSNLKVHIRTHTSEKAYECNHCQKTFRSSHNLKVHIRTHMGEKPYECDHCQKAFRSSSNLKLHIRTHTGEKAYECDHCQKTFRSSSVLKIHIRTHTGEKPYECALCLRTFGQKFTLGIHSMRVHTAIRNYKCGICSKAFSTKYGLKLHVRMHTDERPYRCDWCDGTFRTRTVLVRHVRVHSGDKPFECDFCDRAFSLKRNLQIHRRMHTKENENSFACDVCGKRLMWKRNLRWHLASEHPEMQENAEIKLDSIEKPSVRTRSGRISRKNIISQLTEKNESKSNERP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01050531;
- 90% Identity
- iTF_01050516;
- 80% Identity
- iTF_01050531;