Nign029247.3
Basic Information
- Insect
- Neoneuromus ignobilis
- Gene Symbol
- -
- Assembly
- GCA_029203775.1
- Location
- CP092098.1:3448585-3449941[+]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 0.077 3.1e+02 2.3 0.7 13 29 32 48 25 58 0.78 2 11 0.0018 7.1 7.6 0.8 17 38 64 82 60 87 0.90 3 11 0.0037 15 6.5 1.0 14 41 89 113 83 115 0.84 4 11 4e-05 0.16 12.8 3.3 10 41 114 141 106 143 0.83 5 11 0.00018 0.73 10.7 1.1 15 41 146 169 141 171 0.87 6 11 0.0044 18 6.3 3.5 17 41 176 197 169 199 0.87 7 11 0.00017 0.7 10.8 3.5 17 41 204 225 198 227 0.87 8 11 0.17 6.7e+02 1.2 0.1 17 30 232 250 226 259 0.76 9 11 0.011 43 5.0 1.9 17 40 261 281 250 291 0.87 10 11 0.037 1.5e+02 3.3 1.1 14 43 314 343 303 344 0.76 11 11 4.2e-06 0.017 15.9 4.2 6 44 335 373 330 373 0.91
Sequence Information
- Coding Sequence
- atgatgggcctcactaccctTCTACCCTATGCTCTATGTAAACTAGATTTCCGCTGCGGAGATTCGGTATGTAACTTccgttgtatTCACGCGACCAAACGACGTTTTCGATGCGACGCGTGCGGAAAGGCGTTCAAGACGAAACCATTGCTTCACGCACACTCGAAGATCCACGTCGAGGTACGTCCGAACGTGTGTGATATTTGCACGAAAGCGTTCTCGTCGAAGAGTAACCTCAACCGCCATAAGAAGACGCATACGGGCGAAAAAGCGTACGAATGCGACCATTGCCAGAAAGCGTTCTGGTCGAGTTACAACCTCAAACTGCATATCAGAACGCATACGGGCGAGAAAGCGTACGAGTGCGACCATTGCCAGAAAACGTTCCGGTCGGGCAGCAACCTCAAAGAGCATATCAGAACGCACACGGGCAAGAAAGCGTACGAGTGCGACCATTGCCAGAAAGCGTTCCGGTGGAGCACCAACCTCAAAGCGCATATCAGAACGCACACGGGCGAGAAACCGTACGAGTGCGACCATTGCCAGAAAGCGTACCGGTCGAACCACAACCTCAAAGTGCATATCAGAACGCACACGGGCGAGAAACCGTACGAGTGCGACCATTGCCATAAAGCGTACCGGTCGAGCAACAACCTTAAAGTGCATATCAGAACGCACACGGGCGAGAAACCGTACGAATGTGCGTTGTGTCTTCGGACGTTTGCGCGGAAGTTCACGCTCGACGTTCATTCGTCGAGGGTCCACACCGCAATCAGAAATTACAAGTGCGACATTTGCAGTAAGGCGTTCTCGACCAAGTACAATCTGAAGTCGCATGTGCGTATACATACCGACGAACGTCCGTACAGGTGCGACTGGTGCGACGGTACGTTCCGTACGAGGGCGTTGCTCGTTCGTCACGTGCGCGTCCACAGTGGCGACAAGCCGTTCGAGTGCGACTTCTGCGACCGCGCGTTCTCACAGAGGCGGAATCTCCAGACACACTTCTCCATACACCGGCGCATGCACACGAAGGAGAATTTGTTTGAATGCGACGTCTGCGGGAAACGACTGATGCGGAAGCGGAACCTGCGGAGGCATCTCGCATCAATACATCCGGATAGACAAGAGAACGCCAAAGTCAAACTTGATTCGATCGAAAAACCTTCCGTACGCACTCGTTCGGGAAGAATTTCAAGGAAGAACATCATCTTGCAGCTCACGGAAAGGAACGAGTCTAAATCGAATAAAAGACCGTAG
- Protein Sequence
- MMGLTTLLPYALCKLDFRCGDSVCNFRCIHATKRRFRCDACGKAFKTKPLLHAHSKIHVEVRPNVCDICTKAFSSKSNLNRHKKTHTGEKAYECDHCQKAFWSSYNLKLHIRTHTGEKAYECDHCQKTFRSGSNLKEHIRTHTGKKAYECDHCQKAFRWSTNLKAHIRTHTGEKPYECDHCQKAYRSNHNLKVHIRTHTGEKPYECDHCHKAYRSSNNLKVHIRTHTGEKPYECALCLRTFARKFTLDVHSSRVHTAIRNYKCDICSKAFSTKYNLKSHVRIHTDERPYRCDWCDGTFRTRALLVRHVRVHSGDKPFECDFCDRAFSQRRNLQTHFSIHRRMHTKENLFECDVCGKRLMRKRNLRRHLASIHPDRQENAKVKLDSIEKPSVRTRSGRISRKNIILQLTERNESKSNKRP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01050531;
- 90% Identity
- iTF_01050534;
- 80% Identity
- iTF_01050534;