Basic Information

Gene Symbol
-
Assembly
GCA_029203775.1
Location
CP092092.1:14267984-14279738[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 0.039 57 4.8 0.0 22 42 19 39 10 42 0.88
2 2 1.5e-11 2.3e-08 34.9 0.2 3 44 306 346 305 348 0.95

Sequence Information

Coding Sequence
ATGGAGGGCAGAATAGATAATTTACCGAATACAAATGGACTGAGAATAAAGGAAGAATGGTCCAAAATTCCAacaaaaattccaaataaattaGTGGAATCTATACCCAATCGTTTATtggttATAGCCTCATCGGAATTCAACGATTTACCACGCAAAGAATTTAGAAAGACTGAAACATGTGGAAGTCTGACAGCACAAGGTCAGGTGGGTACGGCAACAGATCTCATCCAAGCTTCAATAGATTTGACAGAAGACCAAACTTGTGTGTGGTCTCGCGTTGTCATGTTGAAACACAACTACTTCGCAGTTAACAAGTTCTGGGCGCTTCTGGATGATTGGATTCATTCATACGAGTTTATACGGGCATATGTTGTGCAGTTTGCCTTCACTTTGGCTAAAGAGTCTCACAGACCTTATATCTTCAACCAAAGGCATTTGCCCCACATAACATGCAGTGATGCTAATCATTATACTACTGATGCACACACGCACTCACATATTCGAAGGAAGAaaaaaatcacTGGTCCACACACATGTGCAGTATGCAAAGCTGAAGTTGAAAAATCACGCCCCCTTCCGCAAGAAAATGCTTCTCAGTATGGTATTCGTCCTGAACAAGTTGCAGCTGGTGCTCGCATATGCAATATGTGTCATTGTAAGTGCGTGCGCACACGTTACACACATTGTCCGTTGCCAACATGCGGTCATTATGCACGTGGACGTGTTAAACGTTTACGCACGATGCCAGCGAGATGGGCTGCTGAGGTTCCAGCTGATGTATGGAATGCAGCTGTACATGAATTCCAAATACCTCATGGATTGACAAAATGTTGTTCGGCATGTTTCAATCGCATTTCTCGCCGACTTGCACCACACTTACCACCTTCGTGTGGTCTTGGTAGTCCAGGAGCAGCTTGGAGTGAAGAAGAACATGCTAGATTGAGAACATTACTGACTGAACACGGAGCACACTGGAAACTTATCGGAGAACGATTAGGCCGTCCAGTTCATcagGTAAAAAACTTCTATCTCGATCAGCGAAAACGATTAGGACTAGATTCAATAGTAGCACAGTATAATCAGAGACATATGGGTGACGAACATAAGCCTGTATTAACGGACGAAGAAGAGTCTGGTAGTACAACGTCAAGTTGTGAAGAATACACTGAAATAAATCCACGTGATCGGCTTTCGAGTGACACGACCTCAGCTAACTCTCCACCTGAAAATGTGGGTTTGAATCAACCTGAACTAAGACCTGCTAAAGCAGATTATGATAGCTCTGCTACCGAAACTGCTGATGAAGGACAAGCTTCAGAAGAACAAAGACAAAATTATTCTGGACAAGCAACAATTACAGTGGTCAATGGGCCCAATCAAGGAAATAGAACAGTAGAAAATTCTTCTCCTATGACCGTGAAAGATTTAATGTTAAATGTGATTGAATTGCAATTGTTAAAAACGGGAGTAAACCAGCCTCCTGTTACTAGTgtAAGCGGAGTAACACCAACAATCACATCTATATTAAAAAGCGAAGCACAAGACATAAAATTTATACGAGAGTTTAAAGCTCGCCCAACAGATAATTCTTTAGCAACACTCTCTGTAGTTAATTCTCATGGAGGTCACGGACCTCCTTCACAACAGCAAGTACCTCAACAACAGCAATCAAGTCATGTGCCGCCACATGTTGGACAAATAGCTGCTACTATAACACCTTTACCACCACAACAATCGATGTCTGGAATTCAACAGGGTGGTCCTCCTCAAAGTCAACAAGATTTACCTAGAGAAGGACTTGTGCAGGTACAGCGTGAACCTGAACCGGTAACATTAGATCTCAGCATAAAGCGACCACGTGATCCGAATCCACCAACATCAGCTCCTAAACTTCAACATCCGATTTATCGACCTCCACCagaacaatattataataaatcaccGGCTATTTATTTGACTTTTCCCCGTCAAAAAACACCAACACCCGTCCAGAGTCCAAAACCGGCTAATCCAAAATCTGGTTCAATAACACATGGAACTCCTGTAATTAATCAGCAGTCCAATATTCAACGTTTTGATGGGATGATGCCGCAAGCTACTCCTCCAAAAATGGGTTCTATAACACAGGGCACACCTATCCATCATCCCAGTCACATGCAAGATAAAAGAGCTTatgaatattatacaaaaagacAATCTCCAGTTGCTAATTATTCACGACAGCCATCGTATACGATGGAACAGCGTCAGATTATAATGAATGATTATATAACGTCGCAGCAAATGCATGGACCGCCAAGAAGAAATGAAAAATCTCAAGAGTCTCCAAGAGGTGTTGTGACCAGTGGCCCTCTATATTACGAAGGCCAGTACATGCCTAGAACTCCACCACCGCAACGTCAAGGTGTGATACAGAGACATCGACCTTCTCCGCCTCCCCCGAGAAGAAGTTACGCACCACCTCCAGGTCATGAGGCTTTCAGTTCTCTTGTAGATGTAGCTGTACAGCAGCCACAGCTCCCTGTACCGAATACTCATAAAGAAACTCATGAAGGTCTCGGGAAGACAATAGCAGATCATACACACAGATACGGTCAACAACTTGCTATTCAACAGCGTCGTCTCGCCGAATTCAACAGGCATCAGTTGTACCGCGAACAGATTCGATCTCAAAATGTACCTCCACCTCAAGCTCAACCTCAAGCGCATGCTCAGCCTCAACAAGCTCCTAGGCCCCAGCACGGTGAGCCTTCAACCATGACGGCGGCAAGCTTGATCGACGCGATAATAACGCATCAGATCAATCTACCGAGCGCTGAAGCAAACGTGAGCCCTAGAGAAAATGTACCAAATCGACCGGGTGACCGATTGTTCCAAGGCTTTAATCCTCCCCCGTTGGTTGAAAACAATGGTAGTCGCTCGCCCGGCGTCATCGATGTTGATCTTGAATCGGACGGACCTCCTCCACAGAAACTGACAGTTAAGGAATTCGCCGATTCAGTTATAAGTCACGATTTTAGCAATAGATCTGGATATTATCAGCATAAGCCTCCGACACAGGCAGATGAAAGACAGATCATCAGAGTGGTTCAACAAAGAAAATATGATCGCACATCACCCCCAAGATCTTATAATCAACCACAGTCACATCTGTCTGCTTTCGATTATGTCAAGAACAGAATCGTCGAAGTCATGAGAACCGAAGACGATAAACGAGACGAACAGAAGGAACCTGAGAAATCGGACAGCCCAGGCGAAATGGTGATAGACGAATCTAAACATGATTCTGCGACACCTCCAAACTTTGTCGGGCAGTCTTTTGCTTATCCTTATAATGCTATAAACGTCGGTCAACACGGTATCATGAATACCAATCAAAAAGTAGAAACACCGCAGAACGATAACGGAAGACAAACAGAACCGAAACCTCTGATGTCCGCGCAATACGAACCCCTGTCGGACGAAGACTGA
Protein Sequence
MEGRIDNLPNTNGLRIKEEWSKIPTKIPNKLVESIPNRLLVIASSEFNDLPRKEFRKTETCGSLTAQGQVGTATDLIQASIDLTEDQTCVWSRVVMLKHNYFAVNKFWALLDDWIHSYEFIRAYVVQFAFTLAKESHRPYIFNQRHLPHITCSDANHYTTDAHTHSHIRRKKKITGPHTCAVCKAEVEKSRPLPQENASQYGIRPEQVAAGARICNMCHCKCVRTRYTHCPLPTCGHYARGRVKRLRTMPARWAAEVPADVWNAAVHEFQIPHGLTKCCSACFNRISRRLAPHLPPSCGLGSPGAAWSEEEHARLRTLLTEHGAHWKLIGERLGRPVHQVKNFYLDQRKRLGLDSIVAQYNQRHMGDEHKPVLTDEEESGSTTSSCEEYTEINPRDRLSSDTTSANSPPENVGLNQPELRPAKADYDSSATETADEGQASEEQRQNYSGQATITVVNGPNQGNRTVENSSPMTVKDLMLNVIELQLLKTGVNQPPVTSVSGVTPTITSILKSEAQDIKFIREFKARPTDNSLATLSVVNSHGGHGPPSQQQVPQQQQSSHVPPHVGQIAATITPLPPQQSMSGIQQGGPPQSQQDLPREGLVQVQREPEPVTLDLSIKRPRDPNPPTSAPKLQHPIYRPPPEQYYNKSPAIYLTFPRQKTPTPVQSPKPANPKSGSITHGTPVINQQSNIQRFDGMMPQATPPKMGSITQGTPIHHPSHMQDKRAYEYYTKRQSPVANYSRQPSYTMEQRQIIMNDYITSQQMHGPPRRNEKSQESPRGVVTSGPLYYEGQYMPRTPPPQRQGVIQRHRPSPPPPRRSYAPPPGHEAFSSLVDVAVQQPQLPVPNTHKETHEGLGKTIADHTHRYGQQLAIQQRRLAEFNRHQLYREQIRSQNVPPPQAQPQAHAQPQQAPRPQHGEPSTMTAASLIDAIITHQINLPSAEANVSPRENVPNRPGDRLFQGFNPPPLVENNGSRSPGVIDVDLESDGPPPQKLTVKEFADSVISHDFSNRSGYYQHKPPTQADERQIIRVVQQRKYDRTSPPRSYNQPQSHLSAFDYVKNRIVEVMRTEDDKRDEQKEPEKSDSPGEMVIDESKHDSATPPNFVGQSFAYPYNAINVGQHGIMNTNQKVETPQNDNGRQTEPKPLMSAQYEPLSDED

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00004601;
90% Identity
-
80% Identity
-