Nign028248.1
Basic Information
- Insect
- Neoneuromus ignobilis
- Gene Symbol
- SMARCC2
- Assembly
- GCA_029203775.1
- Location
- CP092097.1:7625127-7629623[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.8 4.1e+03 -1.2 0.0 33 43 200 210 194 212 0.86 2 2 1.5e-14 2.3e-11 44.5 0.2 3 44 603 644 601 646 0.95
Sequence Information
- Coding Sequence
- atgaTGGCCATAGGTCCAAAAAAGGATGGCGGCCCAAATACGAAATTTTATGAATCGCCCGAAACTATCGCTGCATTCGACGGTGTAAGACAGTGGCTGTTGAAAACATGTAAAAAgtatGTGCAAACAGATCCACCAACAAATAAAGGTTTAGCAGCATTAGTAGTTCAGTTAATACAGTTTCAAGAAGATAATCTAGGAAAAAATTCAAGTAAACCGCCACTTACTAGATTACctgTTCGGTGTTTCAATGATTTTAAACCAGGGGGCGCTCTGTGTCATATATTAGCTACCGTTTATCGTTTTAAAAACGAACAAGGATGGCGCCGTTTCGATTTCCAGGTCGGTAAGAATCCTTCGAGGCTAGATCGTATAATCGAAATGTTCAAGAACGTCGAACGCGCGTTGATTTATCATAAACTGATTTCCTTACCCGTCGTGTACGTCCGTCCCGAAGTAGACAAAACCGcagctaataaaataaaagagatcGTAAACAGACGCCAAGGAACGTTGACGGATTCCGAAGAAGAAGCGACGCACATAATATACCCGACCGTGGATCCGCTCGAAGAAGAATACGGGAGACCGAGTTTACGTAGGGATAAGATGATATTGCTCCACTGGTATTATTTTCCGGACTCTCACGACACTTGGGTGCATTCCGATAACGTTCCGATCGACGCGCCGGAAAGTCCGACGCAGCATTCCGGTCCGTGGAGGATCACGGCGTCGTGGATCTACGAAACCGATCAGTACAACGAATGGATGACCGAAGAGGATTACGAAGTCGACGAACAGGGTCGTAAAAAAGTCCACAAGCTCAGGCTGTCGGTCGAGGATCTGATGAATCCGAGCAGCGACGGAGACAAAGGAAAGAAAAAACAAAAGAGAAAAAGATCTCCGTCTCCTCCTCCGAAAGCGGGCAAGAGGAAGAGCGGTCGTAGTCCGGCCGTCGGAACCAACGCGAAGAAACATCGTTCGGGAGACGAGAACGAATCCGAAGATCTGACGAAAGACATGGAGGAACCGGTTTCCGAACCGAACATCGTCGAAGTCAGCGTGACGACGCCGAAGACGGTCCCGGCCGGTCCGAACAACAAGAAGGATCACGAACTGCAGCCGCTGAAAGGCGGAACGGTCGCGGACATCGAAGAAGCGGAAGAGAAATGCGAAGACTCGCAACAAGGTAAAATGTCCGACTCGAACACTCAAGAAGCCGTGACGAAAGACGAAGGACAGGAAGACAACGCGACCGAACAGATGCATCACATAATAATTCCGTCGTATTCGGCGTGGTTCGATTACAACGCGATCCATACGGTCGAAAAGAGAGCGTTGCCTGAATTCTTCAACGGTAAAAACAAATCGAAAACTCCGGAAATCTATTTAGCTTACCGTAATTTCATGATAGACACTTACAGATTGAATCCTACGGAATATTTAACGAGTACGGCTTGCAGAAGGAATCTAGCCGGCGACGTGTGCGCGATAATGCGCGTTCACGCGTTTCTAGAACAGTGGGGTTTGGTTAATTATCAAGTGGATACGGATTCGAGACCGACCGTGATGGGACCTCCGCCGACGTCGCATTTTCACGTCTTGTCCGACATGCCTTCCGGCTTACAGCCCGTGAACCCTCCGAAAACCGTACAGCCGAGTTCGGCGAAATCGCTTCTCGATCTAGACAAAGAACCGTCGAAGAAACCCGAAGTCGAATCCGCCGCGCAGTTCGGTTTGAAGTTGGACCAGTACGCTAAAAAGCCGGCCGCGATGCGTAACCGTACCGCGGCTTCGCTCGCTCGGGAATGGACGGAGCAAGAGACGTTGTTGCTCCTCGAAGGTCTCGAACTGTACAAAGACGATTGGAACAAAGTGTGCGAACACGTCGGTTCGAGAACTCAAGACGAATGCATATTGCATTTCTTGCGTTTACCGATCGAAGATCCTTATCTCGAAGATTTCGAAGCGGGAGGTGCGCTCGGTCCTCTGGCTTATCAACCTATACCTTTCAGTAAAGCCGGTAATCCGATCATGTCGACCGTAGCGTTCCTCGCGTCGATCGTGGATCCGCGGGTCGCCGCGAGCGCGGCGAAATCCGCCATGGAGGAATTCGCCAATATCAAGGACGAAGTTCCGGCGGCTCTGATGGACGCGCATCTGAAAAACGTCGAGGCTTCTTCGACGGACGGTAGATTCGATCCGGCCGCCGGATTAGCGAACAGCGGCATAGCGGGTACGATACCGGACAAAGAAGAAGAAGAAAAACGCGAAGGAGAACAAAAAGAGGCTTCGGCCGATCAGGTCGGAGATAAGAGCACGTCGATGGAAATCGACGAACAGAAAAGCAAAGACGTCGTCGGTCCGTCGATCAAAAAGCCGCCGGCCGACGAACAGTGCGTGACCGGTACGAACGGAAAGTTTCCGGTGAAAATAGAAGGAGGAGTCAAGAAAGACGAAGAGTCTGAAAAATCGATAACGCCTAAAACGGAAGTCGTAGATAACGCAGAGTTCGAAAAAACGGTCAAAGACGCTCAGATGCAAAGCGCCGCCGCCGCCGCGCTCGCCGCCGCCGCAGTGAAAGCGAAACATTTAGCTGCCGtcgaagaaagaaaaataaagtcTCTGGTCGCTCTTCTGGTAGAGACACAGATGAAGAAACTTGAAATCAAACTGAGACATTTCGAAGAATTGGAAACGACGATGGAACGAGAAAGAGAAGGTCTCGAATACCAGAGGCAACAGTTGATTACGGAACGGCAACAGTTTCATTTAGAGCAGCTGAAAGCCGCCGAATTCCGAGCGAGACAACAAGCTCATCAGCGTCTCGTCGCCGAGCAAGGTCAACAGTGGATGCAGCAACAACAAGGAAGCACTCCCGGAGCTCCTCCGCATTCCGGAAGCAACACGTCCGCGGTCCAGACCGGTAACGACGCGGCGCCGGCGTCGACTCTGACGCCGCCGTCGCCGCAAGCCGCCGCGGTTCAGTCTCCTACTACGCATCAAGATACGAATCCTTAA
- Protein Sequence
- MMAIGPKKDGGPNTKFYESPETIAAFDGVRQWLLKTCKKYVQTDPPTNKGLAALVVQLIQFQEDNLGKNSSKPPLTRLPVRCFNDFKPGGALCHILATVYRFKNEQGWRRFDFQVGKNPSRLDRIIEMFKNVERALIYHKLISLPVVYVRPEVDKTAANKIKEIVNRRQGTLTDSEEEATHIIYPTVDPLEEEYGRPSLRRDKMILLHWYYFPDSHDTWVHSDNVPIDAPESPTQHSGPWRITASWIYETDQYNEWMTEEDYEVDEQGRKKVHKLRLSVEDLMNPSSDGDKGKKKQKRKRSPSPPPKAGKRKSGRSPAVGTNAKKHRSGDENESEDLTKDMEEPVSEPNIVEVSVTTPKTVPAGPNNKKDHELQPLKGGTVADIEEAEEKCEDSQQGKMSDSNTQEAVTKDEGQEDNATEQMHHIIIPSYSAWFDYNAIHTVEKRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPTEYLTSTACRRNLAGDVCAIMRVHAFLEQWGLVNYQVDTDSRPTVMGPPPTSHFHVLSDMPSGLQPVNPPKTVQPSSAKSLLDLDKEPSKKPEVESAAQFGLKLDQYAKKPAAMRNRTAASLAREWTEQETLLLLEGLELYKDDWNKVCEHVGSRTQDECILHFLRLPIEDPYLEDFEAGGALGPLAYQPIPFSKAGNPIMSTVAFLASIVDPRVAASAAKSAMEEFANIKDEVPAALMDAHLKNVEASSTDGRFDPAAGLANSGIAGTIPDKEEEEKREGEQKEASADQVGDKSTSMEIDEQKSKDVVGPSIKKPPADEQCVTGTNGKFPVKIEGGVKKDEESEKSITPKTEVVDNAEFEKTVKDAQMQSAAAAALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETTMEREREGLEYQRQQLITERQQFHLEQLKAAEFRARQQAHQRLVAEQGQQWMQQQQGSTPGAPPHSGSNTSAVQTGNDAAPASTLTPPSPQAAAVQSPTTHQDTNP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01530128; iTF_01510559; iTF_00004600; iTF_01343904; iTF_01342958;
- 90% Identity
- iTF_00004600;
- 80% Identity
- -