Basic Information

Gene Symbol
Arid4b_1
Assembly
GCA_029203775.1
Location
CP092093.1:17375829-17406956[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2.1e-26 5.7e-23 81.9 0.0 1 89 462 548 462 548 0.95

Sequence Information

Coding Sequence
ATGCTTTTTGTACCTGTTCAGAAAAGTGAATTGTCTGTTCATAGTCGAATTCATTCTAGTTATAGACCTTTTATATGTGAATCATGTGGAAAAGCATTTACACGTAAAAGTCATCTTGAAGTTCACTCAGCTATTCATTCAGGAATAAGACCATTTGTATGTGATTCATGTCCAAAATCATTTTCTGTTAAGAGTGATATGCTTGCTCATGCAAGAGTTCATACTGGACATAGAGCCTATACCTGTGATATTTGTGGAAAAGCATATACAAAAGCTAGTGttcttaataaacataaatttatgcaTACAGGAAAGAAACCTTATGAATGTAAGGCCTGTGGGAAAGCATTTGTATATGCTTCTGCATTGGCAGTTCATAAACGTATACATTCTGGTGAAAAACCGTACAGCTGTGATGTTTGTGGCAAAcAAGGTGATGATCCACCCTATTTACCAGTCGGCACCGATGTCAGCGCCAAATACAAAGGGGCTTTCTGTGAAGCGAAAGTCAGTAAAGTTGTTCGAGTTGTGAAACTTAAAGTAACATATAAGGCACCAGGTCTTGGTTCAGCTACTTTATCTGATGAACAAGTTCGAACTGCTCCTGGAGTACCATTACGTGTAGGACAAGTTGTACAAGCACGCCACGctgataaaaaagaatatattgatgcaacaattacaaaaatacaagATTGCAGCCAATATACTGTTGtgtttGATGATGGTGATATAACTACATTAAGAAGAACAgctttatgtttaaaaagtgGAAGACATTTTAATGAAAGTGAAACATTAGATCAGTTACCTCTTACACATCCAGAACATTTTGGAAATCCTGTTGTCGGTGGTAGACGAGGAAGACGAAGTAGACAGTTAAAagaaGATAGTAGTGACGGAGAAGACGCTGACGACGACGCGGAAAGTTCTGATCGTGGTCCTGGTGGATCGGGAATTAGTGGTTCAAGTGACCCTACTAATTCTGCACTTGCAGGTAAAGACGTTGGTCGTGTTGTTTGTGTAGAAACAAGTGAAGGAAAGCGTAAAGGAGCGGCTCCGACTAGTGGGTGGTTTCCAGGACTTGTTGTTTCACCAACAGCACAAGCGGCAGTACGAATAAATACTAAAGACGAGTGTTTAATTAGGTCTTTTAAAGACGGAAGATAttATACAGTTCCACGAAAAGAAATAACAGAATTTAAACGTGACGATCGTGTTGATAGCCCTCCTTTAGCAGAAGCAGTTGACAAAGCAATAAATTATCTTGATAAAGCTGAATTACCACAACATTGGGATAAAGATACTCTTTTCGGAATGAATAATGTTGAATCTGATTCTGATGACAATTATACAGatagTTCTGATGATGAGCCACGAGAAGAAAAAGATCATTTTGTTGCACAACTCTATAAATTTATGGATGATCGTGGAACTCCATTGAATAAAGGCCCAGTTATAACAAATAGAGATGTTGATCTCTGTAGATTATTCCGTATTGTTCACAAACTTGGTGGATACAATCGTGtcacaaataaaaacaaatggCGTGCTGTTACTATTAGGCTTGGTTTTTCTACAAATGGCGCTAGTACAACAAATCTCGTCAAGCAAGCGTATAAAAAGTTTCTGTTTTCTTTTGAAGATTTCAATCGAAAACTTGGATGTACAATGGTTCCAAATCcaagaagtaataaaaaaaatcgtggtAGAAGTCTTATCAGAGATAAAGACAGAATGACACCTATAAGGCCTGCTACAGCAAGCCCAAGACCGGAAACAAAACAAGTAGAAGATACGCCTGATTCACAAAAATCtgaaaaagaaaagaaagaagATGTGCCTGTAGTATCACAACGTCAAGTTGAAAAAGATAAAGTTGAGGAAACTCCAAAGAGGCGGCCAATCAAGTTAAAAGAAGAACCGCAGAAATTAGTCGTTAAAAAAGAACCGGTCACTCGAGATGTATCTAGTGATGGATCAAGTAGTGATGGAACGATTGATGTTGTTTCGGATACGCCTGGTCcggttgttaaaaaaatacaggagACTGTTCAAAAAAGAGaaacaaagaaaattgaaaCCAAATCGACCATTGCTCCGAAAGAAAGGAGAGTAAAACCACCAGCTGGAGAAAAAGTTAAAGCTTTAATTGATAAGTTTGAAGATGTTAAAACTGAAGAAAAAGATGAAGATAAGgTACAACAAACTCGATCAAAATCTGCTGGTGCACCTCGTAAAATTGATACTACAAGAATTACTATTTCACCAGATCATAAAGTTCGGGAAACCAAAACACCAATTCGGGAAATAGCTGCAGGAAGGAGTGTAACTACTGTAACAACAAATAAACCACAAAGAGGTGGAAGATTATCAGCAGATGATGAAAAAAAAAGGGGTCGAAAAAGAAAAGACACAATTGATGATAAGGCTCAAGGAAATGAaagttCATCATCTGATGCAACTTTACCTCCTATCACTAATGTTAATGTTGGtgataaattaaaagtatactATGGGCCTAATTTAGAATCAAAAGTAACATATGAGGCTAAAGTCTTGGAAATTGAAAAGGATGATTCAGGGCCTTTATATCTTGTACATTATACAGGCTGGAATACAAGATATGATGAGTGGATCAAACCACACCGAATAGCAGATAATGTTAGTCAAAATACTAAAGCAAAACGATTAGGAAAGAGTGCTGCTGCAGTTGGTGTTAAAACAGCTGCTGCTTCAAAACCACCAGCAGCAAAAAGAGGCCGAGGTACATCAGTTTCTAGCAGAAATAATCAAGAAGTTCCACCACGATCAACAACACCTTCTTCTGTAACATCTTCTTCTGGTCGTACAAAGTCTCCTGCCACTCCGGCAAGTAGAGCGCCATCAGCTCGATTGGCAAAACAAGCAGAAACTGCAGGTCGAAGGATGACTCGACGGCCTTCAACAGCTACAGATTCAGATAGTTTTGGTAGTGAGTCTGATGATATGCCAAAACGTCGAAATTCAAAACGTAAAGAAGAAATTTTGGATGGGATTATTGATGAAGATAGTGTCGATAGACCAAAACGAATAAGGAAAACACCAAAAAAAGAACCAATCAGTAAAGTCAGTTCTACATCTGTTGAAAGTGATGATGATGCTAAATGTTCAAATTCAGCTCCAAAGGGAAGagattttgatttaaatcaaataagatCAGAACTTAAAGGTTTTGACAAAATTGCTGTTCCATCACAATCTTGTGGTATAAGTTCAGAATCAGAAAATATTGTGCCACCTTTAAAAACTAAACCAGTCACAGTTGTGccagaaattaaaattgtagcAACAAAAGCTAAAATAGAACCCAAAGAAGTtgtaaaaactgaaattttgGTTGAATCCGATAAAGAAAAATTGACTGatgatatatatgaatttaaagaaCCAGAGCCGTTTGAATTTGAGTCTagatcaaaaataaatgatgataAGTCAGTGAAGAAACGTCTTGTTCCTcgaatatttgaagaaattgaaaaaactcCAGAGAAAACTCCTCCAAAGAAGAAAACTGCAAAATCTCCAAAAGCAGAATCAAAAACACCTGATTCAGATAGTAAAAAATCTCGATTTAGACGTAATTTAGACAAAAAAACTGAAGAATCTGAGCCTGTTGTTACTTCAATACCTAAATCACCGATAAAATCAGAACAAGACAGTCCTAAATCACATAGTGCTGAAGATGCTTTTGATAAACTTGTGGAATCTCCATCATTTAATATAGGAGCAAgtccagaaataaaaaaatctccaaCTGATTCCATAGATGCCAAGAAGTTTTCACCTAGTTCTAGTACAATTTCTCTTACTGTTGGATCAACATGCACTTCAATTCTTGATAAAGACAGTTTAAAATTGAATCTTGATGAACCTACAAGTTTTGAAGAATCTTCTAATTTATTCCAAGATCTTCCAGAAACTGAAGAATCTGATAACATTAATGTACCAATCGagtctgaaaataaaatagatccTTCATTTACAAGACGTCCTGATTTATTTTCTGGGAAGTTAAGTCTTTTTACTGACAAGGATGTATCAGAACCTCCAACTCTAGTACCTATATTTGAAGGATTTAATGATAATGATATGGTTCCATGTAAGTCACCtaaaaaagatgaaaattcTGATGATGAGGATCCCATTCGTGCTGTTATTAGAAGAGTTATTGATCAACCAGATGAGGATAGTAATGATGATCAATTTTCTTCAGTCAGTCcagatataaatttgataacttATAGACCAAAACTAGTTGAAGTTAAAAAAGATGTAAATGCAATTGTAGAAAATGCTACAAAAATTGAATGTACAAAAGATCATGTTGAGTttagtttattaaaagataCATCTCGAGATTCATTACAAAATTCATcattaataaaagaaacatcTGGAGCACAACCAAATACTAATCcagtaataaaagaaattgaaaaaagcgATAATTTGGAAGAAATAGATAAGAAGAAAGCTGTCACTGACAGTGAAAAAAGTACAATAGAAGTAAAAAAAGAGATAATAGTTGATGAATCTAAATCTCTTGTAGAGACACTCATAGTGAAAACTGAGCCAGTTGAACAGAAACCTCATATTACAATAAAGAaggaagaaaaaataacaaaacaaatttCTCCTGCATTACAAGAAACTGATAGTTCATTACTTGAAGCTGCAATCAATAGGCAAAAAGTTGATTTAGTTAAAGTTGAACCTAtagatataaacataaaaacagGCACAAAAATTGCTGATTCAATACTTCAGAAATTCAATATGATCAAAAACGAAGAACAAACAGTTTTGAATAAAGGTCagttaaaaaaagaagaaaaacctCCTATGGTAGAAAAGGCTGTTGAAatcaaaactgaattaaaagCTGTAACAAAAACTGTTGAAACTCAAAAACTAACTAAAAAAGAAGAATCTAAAGAATCATCATTTTTAGATGTTCATAAGAAACGTGCAGCGAATAAAAAAGCTATCAGTCGTGAATTTATTGAATCTGATACAGATAATAGTGATTCTGAAGAAAGACTAGTTATAGCACGTTCCGATGAAGATTCACAAACAAGTCGTGGTGATTCTTGTTCAAATCTTGTTGATAAAATCGACTCCAAAGATACAGATAGCGATGCTTCTGCTTTACGAATTAATACAGATGAAAGTTCAcaggaaataaaagaaacacgATTAAATTTCGAACCAGATTCAACAATTGTTCATGTGACTGAAATAGGAAATAAAGAAGAAATTGATCAGATTGAAAATAAGTGTGAATCAAAAGAAGAAGAGCATGACGGTAATGTTTCATTGTTGTTGTGTGAAGAAACAATACCTGGGAGTCCTGCTCCTGTGTCTGATCCAACTGTTTCAAGTCAAAGTGAAAATCATACTATTTCAAAACAGACAAAATGTCTTGTTCTAGAAATGCCATTTGCAAGTGCTCCAGGTAGTAGTAATAGTAAAGGATTGCCTAATGAACCAACAAAATCTACAACTACTGCTAGAATTGATAACAAGCCTGCAAATGTTGTTGAAGCACAACCTGTTCAAGTTATTGGTGTAGTCATTGGTGGAAGGAATAATGAAATTAGAGGAGATGATGCAGCACCTGTTATGGATAACACACCTCCTACTACACCTGAAAGTACCATATCAAATCTATCACCAATAggggAGCATGGTGGTTCTTCTCCAGGAACAGCTGATGAAAGTAATAAATCTCAAAGAGGATCAGAAGCAAGTGAAGTGGAACCTTTTTCATCTCGAACTTCAAAACCTCAAAATTACAGTGaagaagATACTTTAACAGATACAACACCTCTTGATATCCGAGCAAAGAAAAGTCCTCGTAATGCTGATGAAACCATATCAAATTTACCTGGGCGAAAGCGTCGGAGATCTTTTAAAGGAAATGCAGACGATATTCAAGTTCCTTCAGTTACAAAACGTGGTCGGCGACCAaatgctttaaaaaatatagcacGAACTGTAACTGGAAATAATAGTGATAGTGATGATACATCAGAACATTCTAGTGCCACATCAACTGTACCACCTGGTCCACCATCAGCATTAAGTACTAATTCAAATTCTACTGATAGATTAATACCTACACAAACCCGTTCATCATCGAGAACatcaaagtttaattttattgtagaatTAGGGCCCGATTTAGATGGAAATCAACGAATAGCAGTACTACAACAAAAACTATCAGAACTTCGTAAAGCATATAATGAAGTTAAGAATGAATTGGCTTGTATAGATAGAAGAAGGAAAAAATTGCGTAGAAGAGAGCGTGaagCAATGAAAGCGGCAAAACAAGAAATATCTTGTGCGTGA
Protein Sequence
MLFVPVQKSELSVHSRIHSSYRPFICESCGKAFTRKSHLEVHSAIHSGIRPFVCDSCPKSFSVKSDMLAHARVHTGHRAYTCDICGKAYTKASVLNKHKFMHTGKKPYECKACGKAFVYASALAVHKRIHSGEKPYSCDVCGKQGDDPPYLPVGTDVSAKYKGAFCEAKVSKVVRVVKLKVTYKAPGLGSATLSDEQVRTAPGVPLRVGQVVQARHADKKEYIDATITKIQDCSQYTVVFDDGDITTLRRTALCLKSGRHFNESETLDQLPLTHPEHFGNPVVGGRRGRRSRQLKEDSSDGEDADDDAESSDRGPGGSGISGSSDPTNSALAGKDVGRVVCVETSEGKRKGAAPTSGWFPGLVVSPTAQAAVRINTKDECLIRSFKDGRYYTVPRKEITEFKRDDRVDSPPLAEAVDKAINYLDKAELPQHWDKDTLFGMNNVESDSDDNYTDSSDDEPREEKDHFVAQLYKFMDDRGTPLNKGPVITNRDVDLCRLFRIVHKLGGYNRVTNKNKWRAVTIRLGFSTNGASTTNLVKQAYKKFLFSFEDFNRKLGCTMVPNPRSNKKNRGRSLIRDKDRMTPIRPATASPRPETKQVEDTPDSQKSEKEKKEDVPVVSQRQVEKDKVEETPKRRPIKLKEEPQKLVVKKEPVTRDVSSDGSSSDGTIDVVSDTPGPVVKKIQETVQKRETKKIETKSTIAPKERRVKPPAGEKVKALIDKFEDVKTEEKDEDKVQQTRSKSAGAPRKIDTTRITISPDHKVRETKTPIREIAAGRSVTTVTTNKPQRGGRLSADDEKKRGRKRKDTIDDKAQGNESSSSDATLPPITNVNVGDKLKVYYGPNLESKVTYEAKVLEIEKDDSGPLYLVHYTGWNTRYDEWIKPHRIADNVSQNTKAKRLGKSAAAVGVKTAAASKPPAAKRGRGTSVSSRNNQEVPPRSTTPSSVTSSSGRTKSPATPASRAPSARLAKQAETAGRRMTRRPSTATDSDSFGSESDDMPKRRNSKRKEEILDGIIDEDSVDRPKRIRKTPKKEPISKVSSTSVESDDDAKCSNSAPKGRDFDLNQIRSELKGFDKIAVPSQSCGISSESENIVPPLKTKPVTVVPEIKIVATKAKIEPKEVVKTEILVESDKEKLTDDIYEFKEPEPFEFESRSKINDDKSVKKRLVPRIFEEIEKTPEKTPPKKKTAKSPKAESKTPDSDSKKSRFRRNLDKKTEESEPVVTSIPKSPIKSEQDSPKSHSAEDAFDKLVESPSFNIGASPEIKKSPTDSIDAKKFSPSSSTISLTVGSTCTSILDKDSLKLNLDEPTSFEESSNLFQDLPETEESDNINVPIESENKIDPSFTRRPDLFSGKLSLFTDKDVSEPPTLVPIFEGFNDNDMVPCKSPKKDENSDDEDPIRAVIRRVIDQPDEDSNDDQFSSVSPDINLITYRPKLVEVKKDVNAIVENATKIECTKDHVEFSLLKDTSRDSLQNSSLIKETSGAQPNTNPVIKEIEKSDNLEEIDKKKAVTDSEKSTIEVKKEIIVDESKSLVETLIVKTEPVEQKPHITIKKEEKITKQISPALQETDSSLLEAAINRQKVDLVKVEPIDINIKTGTKIADSILQKFNMIKNEEQTVLNKGQLKKEEKPPMVEKAVEIKTELKAVTKTVETQKLTKKEESKESSFLDVHKKRAANKKAISREFIESDTDNSDSEERLVIARSDEDSQTSRGDSCSNLVDKIDSKDTDSDASALRINTDESSQEIKETRLNFEPDSTIVHVTEIGNKEEIDQIENKCESKEEEHDGNVSLLLCEETIPGSPAPVSDPTVSSQSENHTISKQTKCLVLEMPFASAPGSSNSKGLPNEPTKSTTTARIDNKPANVVEAQPVQVIGVVIGGRNNEIRGDDAAPVMDNTPPTTPESTISNLSPIGEHGGSSPGTADESNKSQRGSEASEVEPFSSRTSKPQNYSEEDTLTDTTPLDIRAKKSPRNADETISNLPGRKRRRSFKGNADDIQVPSVTKRGRRPNALKNIARTVTGNNSDSDDTSEHSSATSTVPPGPPSALSTNSNSTDRLIPTQTRSSSRTSKFNFIVELGPDLDGNQRIAVLQQKLSELRKAYNEVKNELACIDRRRKKLRRREREAMKAAKQEISCA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00004457;
90% Identity
iTF_00004457;
80% Identity
iTF_01050756;