Ncya008550.1
Basic Information
- Insect
- Neoitamus cyanurus
- Gene Symbol
- Zfy1
- Assembly
- GCA_947538895.1
- Location
- OX384544.1:30313422-30331704[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 16 0.0079 1.2 10.6 1.8 1 23 72 94 72 94 0.93 2 16 0.0096 1.4 10.3 2.9 1 23 100 123 100 123 0.91 3 16 0.46 68 5.1 2.2 1 23 126 149 126 149 0.97 4 16 0.7 1e+02 4.5 0.3 3 21 159 177 157 178 0.78 5 16 0.0015 0.23 12.8 1.5 1 23 186 208 186 208 0.98 6 16 0.00046 0.068 14.5 3.6 1 23 214 236 214 236 0.97 7 16 3.3e-06 0.00049 21.2 0.3 1 23 242 264 242 264 0.97 8 16 0.077 11 7.5 0.5 1 22 270 291 270 291 0.95 9 16 0.0023 0.33 12.3 2.9 1 23 582 605 582 605 0.97 10 16 0.0069 1 10.8 3.5 1 23 627 649 627 649 0.96 11 16 6.9e-05 0.01 17.1 0.8 2 23 685 707 684 707 0.95 12 16 0.00024 0.035 15.4 0.3 2 21 723 742 722 743 0.93 13 16 0.00015 0.022 16.0 2.5 1 23 751 773 751 773 0.98 14 16 6.1e-05 0.009 17.2 2.2 3 23 781 801 779 801 0.96 15 16 4.3e-06 0.00063 20.9 0.3 1 23 807 829 807 829 0.98 16 16 0.021 3.1 9.3 2.2 1 21 835 855 835 856 0.93
Sequence Information
- Coding Sequence
- ATGTCTGTTGGCGACGATAACTTTGCTAATTGGTCGGACTCCGAGGAATCTGGAAATGAGAGCCCTGCGAAAGGCAATAACTCCGACCGGAGGTGCAAATTTTGCGTTAAATTGGTTCCGAAAGACTCTGATGTCAAAGTTCATGAAAAAAGGTGCTCCGCTGCTTTGCGGAACACAGCGGACTTGGTAACATGCAGAGATGGCAGCAAGCGGTTCCTTTGCGACATTTGCTTCAGGTTCTTTAAATATCTCACCGGGCTGAACAAGCACAAGAGCTGGCATGAGCCTCCTGGAGGTTTCGCCTGTCGTCATTGCGAAGCAAGGTTTTGTACTGCTCAAGAGCTCGAAAAACACAAAGAAGAGAGTCATCAGGTCTACAAGTGCCAAATTTGCAAAAGCATCCACGAGACCCTTGAGAACTATCTGAAGCACATTAAGAGGGAGCACAACGGGCTGGACAGAATCTGGGTGCACTGTGACGACTGTCCCATGAACTTCAAGTCACAGATAATTTTGGACTATCACAAGAGAACTAAATGCGGCACCATTAAGCCTTTTAAGTGTGACGAGTGCGGATCACATTACCAAACTAAGGCCACTCTTAATATTCACAAGCTTATTCATACCGGCGAGAAATCATTTTGTTGCAGCTTCTGCGGAAAGAGTTTTCTAAGTAAGGGCCAACTTACTATTCACGAAAGGAAGCACACAGGGGAGAAACCTTACAAATGCGAGATATGCGGAAAGGCATTTTCCTATCGTGAAAGCTTGGTGACTCATTCATCAGTTCATACAGGCATTAAGCCTTACGCATGTGAGGCGTGCGATGCTAGATTTTCATGTGTAGGGAATCTACAAAAACATAGACGCACTCGACCAAAGAGCTGTGGCTTACCGCAGTATTGTGTTAATAAAAAGGCTGCTCCCAGGGCGAGCAATAGAGTTCCAGGAACGCTAACAATGTCCAATGTGAAAATTACAAAAGCAAATAAAGTGTTGGGTCTGAAAAATAAGACAAACAATATCGAAACAAAAAGAGATAAAACAGTAAATACCGAACAAGAAAATGCTAATAAACAGGATTCAGAAAGTACTTCTACAAACTACGAAATTGCAACAGAAAATACTGATAATAAAAGTGATGCCATGGAGAAAATAATTGATATCAATACAATAGAAATGTTAGACATTCAAATTCTTAATGAGCCGGTTGAAAAGGATATTACCTATAATGATAGCGAGCCAAATTGTTTGTTTGGAGAAGTCTACCAAATTGTGGAAATTGAAGAGGAGCAAATAAATTCAAATGATATTTGCAAAATGGTGAATAAAATAGAGCCTCTACTTAGTGAAGGGACCCAATACAATCAGGAGCATGACCCTTTAACATCGGAAATGGAGGACGATATAAAATCGGCAAGTTTCGAAGATGTTTACTTGGATCAAGGACACTATGATCAAAATGACATGGATAATTATGATGGAGACGATATGATGCTTGTAATGATGAAGGAAGATAACGAGGATAAAAATGAGTCGATTCCCTTATCCATCATTAAATCTCAGGAAGAAATTATACATGAGGAGATGAACTATCATCGTGAGTCGGATGAGTCTGCAGGAAGTACATCAGAAATCGAACATCAACAATGCTACAGTGAAGGGAGCGAGCCAGAATGTTTTATTGATGAATTAAACACTGCTACAAAATTGATTTCATCGAATATTGCAAAAAAGGATGTTTACGAATGTAGTCTTTGTCCCAAAATTTATCATAATAGACGATCATTTCTTAAGCATTTGAAAAACGATCACAACTTAGAGCAACCTGAACTACAAGAAAAATCACGTAAAACCCGTCAAAGAAACACCGGCACCCATGCCTGTCCTTTTTGCAAACGAATGTATTCCGAACGCAAATTTTTGGATAAACACATTAAACGTCATGGGACTGACGGAAAATTAACTCATAAAAGTTCATGCTGTAGTAGATTTTTTGAATCTAAAGAGGATGCTGACGATCATGCCATAGGTTTCCACAGCCGAATGGTTTCGTGCGTATTATGCAGCAAGACATTTTCAAGTCCTGAAAAATTAAAAAAACATAAACAAAGTGTGCATGCAACGCAGAAAAGTGCACAAGAAAAAACCAATAAGAAATATAGCGTTTGCCAGAAATGTGGGAAAAAGTTTACAAGTAAAATTGCTTTGTCTGACCACGAAAGATCTGACTGCGGAAGATCACCTCTGTATAAATGTGATGTTTGTAATAAGGACTTTCATAGCGCAGGTTCTCTTAAAACTCATAAAACTATGCATACTGGAGATTTACCTCATTTATGTAACTATTGCGGCAAAGCTTTTAGAACGTTCGGTCAAGTTAAAGTACACGAGAGGAAGCACAACGGTGAAAAACCCTTTAAATGCACGATGTGTCCAAAAGTGTTTGCCTATCGTGAAAGTCTCCTTACTCACATTTCTGTTCATACAGGTCTAAAACGATTTATGTGTGAAGGTTGTGGAAGGCGGTTTTCCTGCATTTCCAATCTCCTTATGCATCGAAAACACAATCAAAGTACGTGTGGGACTGTACCAAACAGTACGAAACCTTTTTCAGAGACTATAGGAATTTCCCGCGGAAAGTTATACGTTGGTGAAAAACCAATGTAA
- Protein Sequence
- MSVGDDNFANWSDSEESGNESPAKGNNSDRRCKFCVKLVPKDSDVKVHEKRCSAALRNTADLVTCRDGSKRFLCDICFRFFKYLTGLNKHKSWHEPPGGFACRHCEARFCTAQELEKHKEESHQVYKCQICKSIHETLENYLKHIKREHNGLDRIWVHCDDCPMNFKSQIILDYHKRTKCGTIKPFKCDECGSHYQTKATLNIHKLIHTGEKSFCCSFCGKSFLSKGQLTIHERKHTGEKPYKCEICGKAFSYRESLVTHSSVHTGIKPYACEACDARFSCVGNLQKHRRTRPKSCGLPQYCVNKKAAPRASNRVPGTLTMSNVKITKANKVLGLKNKTNNIETKRDKTVNTEQENANKQDSESTSTNYEIATENTDNKSDAMEKIIDINTIEMLDIQILNEPVEKDITYNDSEPNCLFGEVYQIVEIEEEQINSNDICKMVNKIEPLLSEGTQYNQEHDPLTSEMEDDIKSASFEDVYLDQGHYDQNDMDNYDGDDMMLVMMKEDNEDKNESIPLSIIKSQEEIIHEEMNYHRESDESAGSTSEIEHQQCYSEGSEPECFIDELNTATKLISSNIAKKDVYECSLCPKIYHNRRSFLKHLKNDHNLEQPELQEKSRKTRQRNTGTHACPFCKRMYSERKFLDKHIKRHGTDGKLTHKSSCCSRFFESKEDADDHAIGFHSRMVSCVLCSKTFSSPEKLKKHKQSVHATQKSAQEKTNKKYSVCQKCGKKFTSKIALSDHERSDCGRSPLYKCDVCNKDFHSAGSLKTHKTMHTGDLPHLCNYCGKAFRTFGQVKVHERKHNGEKPFKCTMCPKVFAYRESLLTHISVHTGLKRFMCEGCGRRFSCISNLLMHRKHNQSTCGTVPNSTKPFSETIGISRGKLYVGEKPM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00628607;
- 90% Identity
- -
- 80% Identity
- -