Basic Information

Insect: Neoitamus cyanurus
Gene Symbol: -
Assembly: GCA_947538895.1
Location: OX384543.1:21909220-21915737[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 1.3e-05 0.0019 19.4 0.6 3 23 192 212 190 212 0.96

2 12 9.1e-08 1.3e-05 26.1 1.3 1 23 218 240 218 240 0.99

3 12 3.4e-07 5e-05 24.3 5.6 1 23 246 268 246 268 0.98

4 12 4.5e-05 0.0067 17.7 0.8 1 23 274 297 274 297 0.98

5 12 1.4e-05 0.0021 19.3 0.5 1 23 305 327 305 327 0.97

6 12 8.4e-07 0.00012 23.1 2.1 1 23 334 356 334 356 0.97

7 12 0.00032 0.047 15.0 5.2 1 23 362 384 362 384 0.98

8 12 8.3e-06 0.0012 20.0 0.7 1 23 391 413 391 413 0.99

9 12 9.9e-05 0.015 16.6 2.1 1 23 421 443 421 443 0.97

10 12 0.00023 0.033 15.5 1.1 1 23 451 474 451 474 0.94

11 12 0.0065 0.96 10.9 0.0 3 23 484 505 483 505 0.94

12 12 0.15 22 6.6 2.6 2 20 511 529 511 532 0.89

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	1.3e-05	0.0019	19.4	0.6	3	23	192	212	190	212	0.96
2	12	9.1e-08	1.3e-05	26.1	1.3	1	23	218	240	218	240	0.99
3	12	3.4e-07	5e-05	24.3	5.6	1	23	246	268	246	268	0.98
4	12	4.5e-05	0.0067	17.7	0.8	1	23	274	297	274	297	0.98
5	12	1.4e-05	0.0021	19.3	0.5	1	23	305	327	305	327	0.97
6	12	8.4e-07	0.00012	23.1	2.1	1	23	334	356	334	356	0.97
7	12	0.00032	0.047	15.0	5.2	1	23	362	384	362	384	0.98
8	12	8.3e-06	0.0012	20.0	0.7	1	23	391	413	391	413	0.99
9	12	9.9e-05	0.015	16.6	2.1	1	23	421	443	421	443	0.97
10	12	0.00023	0.033	15.5	1.1	1	23	451	474	451	474	0.94
11	12	0.0065	0.96	10.9	0.0	3	23	484	505	483	505	0.94
12	12	0.15	22	6.6	2.6	2	20	511	529	511	532	0.89

Sequence Information

Coding Sequence: ATGTGCCGTGTGTGCATGGACGCCAAGGGGGAAGTGAACATCTCCGATGATGGGACATTGGACAAATTCCGCTTTCTAACCCTGTTGGATATTGCAGATAAGGATGATCTACCATCGCACCTTTGCATCCTTTGCTCCATAAAGCTTAAAATAGCCTACGAGTTCAAAAATCAAGCGATAGCATCAGATACTCATCTGCGAAGCTTTATAAATTCGATAAATACGAAATTTTCTGCCTTAGCAGAGTCCCACAGAAAGGAAGCTTATACAAGTTTAGAGGAAATTAACTCGCTACTGCCCGATGGAGAAACAGTAACTATAGTTAAGATTTCTGATGTTACTCAAGACAGTGAAGATCTTGTAAATACTACACAAATCGAGATGCTCGAAGACGCAGATGTCTCTGAATTATTTGAAAGCGAGGATGTTGTTGAAGGTGATGAACAGACGGAACAAGGCGAGGATACGATTGCAAAGGAGGATACGAGTGCAAAGGACGATACGAGTGCGAAGAAGGAAATAACGGTGGAGGATGTGAAGGTGGAGATAACACGATTTGACGATACTCTTTTCTGTGCGGAGTGTAATAATCGATTTTCAACCAAACCAAATCTAATGAGGCATATTTTAACACATGCGAAAGCAAGGCCGTACAAGTGCACTATTTGTGGAAGCAGATTTACTCAAAATGGGTCCTTGAAGCAGCACATGATGACTCATACTGGTGAAAGGCCTCACAAGTGCAAAGTTTGTCGAAAGTCGTTTACAAGAAAGACTATGTTGACCATACATATGCGAACGCACACTGGAGAAAAGCCGTATCAATGCTCTGAATGTACTGCTTCCTTTTCACTGAGAGCTGGATTCAAAAAACATATGGATACTACTCATCGTAAAGATACCAAGGATTCGTTTTCATGCAATATTTGTGATAAAGTGTTAAGATCGAAGTACGCTCTTACCATGCATCTTAGTCTCCACAACGATGATGAAGACAAACACGAATGTCCAATCTGTCTGAAAGCCTTCTCAAACAAATACAACTTGAAGTATCATATCAAGAACCACGAGTCGGACGAAAAATATGTCTGTTACATATGCGATAAGTCCTTCAGATGTAAATCTAAGCTAAAGTATCATCTTAGTACTCATAATAAGGAAAAGGAAGAGTTTAGGTGCTCCGTATGCGAAGAAACCTTCCCAAAGAAGTTTCAGCTGCTTGCACATTTACAAACGCATGAAAGCACGGAGAGTTGTAATTATGCTTGTAGAAGATGCAAAAAAAAGTTTACGTTGAGAGAAAACTTAATGGAGCATCTGAGAAATCATGTGGACAACACAGCCCCATTCTTTCGGTGTCCGAAGTGCGATGTTGCCTTTAATATAAAGCGTAATTTGAAGTTGCATTTATTCAATTATCACAAGGAGCATGTACCAAACTTGAACAATTGCGATATATGCGATATTCCTTTTGTTTCTGTCACTGGCCTGAATGAACATATTGTCAAGAAGCACGATGTGGTGGACGAAAAGTGCGATGAATGTAGTGTGAGATTCACTTCGAAGAGGCTATATTTTGAGCACTGTATTGTTCATGATATTGTGGACCTCAGAGAGGACAAGTGTTAA
Protein Sequence: MCRVCMDAKGEVNISDDGTLDKFRFLTLLDIADKDDLPSHLCILCSIKLKIAYEFKNQAIASDTHLRSFINSINTKFSALAESHRKEAYTSLEEINSLLPDGETVTIVKISDVTQDSEDLVNTTQIEMLEDADVSELFESEDVVEGDEQTEQGEDTIAKEDTSAKDDTSAKKEITVEDVKVEITRFDDTLFCAECNNRFSTKPNLMRHILTHAKARPYKCTICGSRFTQNGSLKQHMMTHTGERPHKCKVCRKSFTRKTMLTIHMRTHTGEKPYQCSECTASFSLRAGFKKHMDTTHRKDTKDSFSCNICDKVLRSKYALTMHLSLHNDDEDKHECPICLKAFSNKYNLKYHIKNHESDEKYVCYICDKSFRCKSKLKYHLSTHNKEKEEFRCSVCEETFPKKFQLLAHLQTHESTESCNYACRRCKKKFTLRENLMEHLRNHVDNTAPFFRCPKCDVAFNIKRNLKLHLFNYHKEHVPNLNNCDICDIPFVSVTGLNEHIVKKHDVVDEKCDECSVRFTSKRLYFEHCIVHDIVDLREDKC

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -