Basic Information

Insect: Neoitamus cyanurus
Gene Symbol: -
Assembly: GCA_947538895.1
Location: OX384544.1:2986149-2991574[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 0.12 18 6.9 1.3 1 23 114 137 114 137 0.89

2 20 5.3e-06 0.00077 20.6 0.5 1 23 143 165 143 165 0.99

3 20 0.00015 0.023 16.0 0.1 2 23 171 192 171 192 0.97

4 20 0.019 2.8 9.4 0.5 1 23 198 221 198 221 0.97

5 20 0.00014 0.02 16.2 0.3 1 23 248 270 248 270 0.94

6 20 9.1e-05 0.013 16.7 3.6 1 23 276 298 276 298 0.97

7 20 2.9e-06 0.00043 21.4 2.2 1 23 304 327 304 327 0.96

8 20 0.027 4 8.9 3.6 1 23 336 359 336 359 0.92

9 20 0.00029 0.043 15.1 0.6 2 23 456 477 455 477 0.96

10 20 0.00064 0.094 14.0 1.4 1 23 483 505 483 505 0.98

11 20 6.7e-05 0.0099 17.1 2.6 1 23 516 538 516 538 0.98

12 20 0.00018 0.026 15.8 3.0 1 23 544 566 544 566 0.95

13 20 0.00019 0.028 15.7 6.5 1 23 601 623 601 623 0.96

14 20 0.00072 0.11 13.9 5.0 1 23 629 651 629 651 0.96

15 20 8.2e-05 0.012 16.8 5.3 3 23 659 679 658 679 0.97

16 20 0.00066 0.097 14.0 7.5 1 23 685 707 685 707 0.98

17 20 2.5e-06 0.00037 21.6 1.2 1 23 945 967 945 967 0.96

18 20 0.00026 0.038 15.3 1.2 1 23 973 995 973 995 0.97

19 20 0.00023 0.034 15.4 0.6 1 23 1002 1024 1002 1024 0.98

20 20 6.2e-05 0.0091 17.2 1.9 1 23 1030 1052 1030 1052 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	0.12	18	6.9	1.3	1	23	114	137	114	137	0.89
2	20	5.3e-06	0.00077	20.6	0.5	1	23	143	165	143	165	0.99
3	20	0.00015	0.023	16.0	0.1	2	23	171	192	171	192	0.97
4	20	0.019	2.8	9.4	0.5	1	23	198	221	198	221	0.97
5	20	0.00014	0.02	16.2	0.3	1	23	248	270	248	270	0.94
6	20	9.1e-05	0.013	16.7	3.6	1	23	276	298	276	298	0.97
7	20	2.9e-06	0.00043	21.4	2.2	1	23	304	327	304	327	0.96
8	20	0.027	4	8.9	3.6	1	23	336	359	336	359	0.92
9	20	0.00029	0.043	15.1	0.6	2	23	456	477	455	477	0.96
10	20	0.00064	0.094	14.0	1.4	1	23	483	505	483	505	0.98
11	20	6.7e-05	0.0099	17.1	2.6	1	23	516	538	516	538	0.98
12	20	0.00018	0.026	15.8	3.0	1	23	544	566	544	566	0.95
13	20	0.00019	0.028	15.7	6.5	1	23	601	623	601	623	0.96
14	20	0.00072	0.11	13.9	5.0	1	23	629	651	629	651	0.96
15	20	8.2e-05	0.012	16.8	5.3	3	23	659	679	658	679	0.97
16	20	0.00066	0.097	14.0	7.5	1	23	685	707	685	707	0.98
17	20	2.5e-06	0.00037	21.6	1.2	1	23	945	967	945	967	0.96
18	20	0.00026	0.038	15.3	1.2	1	23	973	995	973	995	0.97
19	20	0.00023	0.034	15.4	0.6	1	23	1002	1024	1002	1024	0.98
20	20	6.2e-05	0.0091	17.2	1.9	1	23	1030	1052	1030	1052	0.98

Sequence Information

Coding Sequence: ATGGGCTCAAATGACACGTTCAGTGCAATTGGGAGAATTGGGGCTGGGGGCAGCTATGAGAAATCATTGTTTACATTTAATGAAGCTGACACGGATTTCCTCAGCACAAATGATTTCGTTGCACTCGACCTGGATGGAGTGGTGGATTCCTTCAAGGCAGCTGCAGCTGTTACTGGACACACAACATTTGCCGATGACGGTTCTGGGCAATTTCAGGACCTGGTTTTAGAGAATCGGGGCGATAAAACGGTATCTGAAGAGACGAATGTCTCCGATCATCCCGCTAAAGTGAAGAAGAAAAGGAAGAAACGGGCTCAGGGAAATGTCGAAACAAAGTCGTTTCCCTGTGATCTGTGCGATGAGACGTTTAACATCTCTAGAGAGCTCAAGTGCCACAAGATCTCCATGCACCGACTTGCCAAGCTCTATAGGTGTGAGGAGTGCTCGAAGGCGTTTAATTTCCCAAAGAATCTCTTCCTGCACATTGCCACCCACAGTACCGCTCCTGCTACATGCCCAGAGTGTGGTAAGGTCTTCCAGAGGATCTCCAGTTTCGTGGGGCACATAGAGAGCCACATCGAAAACGACAACTTCAAGTGCCAGGCCTGCGACATGGAGTTTGAATTTGAACAATATTACGAGAGGCACATAGAAAAAGGACACAGGGGTGAGGAAATAATGGCTGCTTTAGTCATCAGAAAGAGGAGATCAAGGGACGATGGAATTGGTTTTAACGGAAAATATGCGTGCAAAACCTGCAGTAAACGATTCCCGAAACCTAGTCTGCTGCTGAGGCATGAAATAGCTCACGCCAAAGTAAAACCGTTTGTGTGTGTCGACTGCAACAAAAGATTCAGTCAAAAATGCTCCCTAGATCGTCATAGGATGCTTCACAGTGGCATCAAACCTCATAACTGTCCCAAGTGTAACATGAGCTTTTCCCAGCGCACAAATCTAATTACTCACATAAAACGCGCCCACACAACTAAAAACACTGAGCTCCAGTTCCCTTGCGATAGTTGCTCCTGTGTCTTTAGCAAGCTTAAAAGTCTCAACCGCCACAAGACATTAAGGCATTCATCGAAGACTGATACAAATAAAGAACTATCTTTTACTGAAATTCTTGAGCATATTATGAGCCTTCATGAGGACAATAAGGCACAGCTAAACCCGACTTCTAGCAATCAGGCTACTGTACTTACGGATGATCAAATTCTTCCTAAAAAACTAGCAAATGTTGACAGTGTTCCAGCCAGTCCGCCAGAGAAGGAGCAATACGTTACCGTTGCCGACTGCCTGTACCCAACTAATGAAAGGGCCAATCAAACGTTACAGGAGATTAAGGACGATGGAGTCAAAAAGCTGGAGTGCCTTAACTGTCCAAAGAGATTTCAGTCTTCCTATGATATGGTTAGGCATACGCGAATCCACACTAAGGAGAAACCCTTTGAATGTGAATATTGTGCCCGCAAATTTACCCTGAAAAATACTATGAAACTTCATATGCAGATACACAGGAAGAAGCCTAATGAAGTCACTAACCTGTATCATTGTACTTATTGCCAGAAGTCATTTGATTCTCTTAGGAATCTGGACTTACATGTGCGAATTCACAGCACCTACAAGCCGCACATTTGCCCAATATGCTCCAAAACCTTCAAAAGCACCAACAGTTTGAGTAAACACAAACTGAACCACGGACCGAAAAATCCTGAAGATGAAAGCATAAAACGACAGCTTCTTCCGCCGATTATCCAAAACACAGACGATAAACCAAAGGAAGATCAAAGTGTCCGAACTCATCAGTGTACTAAATGCGGCATAAGATTCAAAAAGTCCTCCCACCTGAAGCAGCACGAGTACAGTCACCTCAAACTGAAGAATTTCCAGTGCAAAGTATGCCACAAGTTTTTCTCCACAAAGAGCTCCCTGGGATTTCACCAAAAAATCCATTTAGGACACAAAACCGCTGCATGTGAGGTCTGTCACAAACAGTTCTGCAGGAATAGCGATCTAAAAAGGCACAGAACAGTACACAGCAATTTTCGTAATTTTGTTTGTCCGTACTGCAAAAAGGCGTTCAAAAGGAAGTGTAATTGTCAGAAACATATAAAACTCCATGTGAAGGATGTGCTTATTAAGGAAGAAGTGGAAAATGTTCCCCTGGTTTCAGATACCGATAGCAATATCCCTGAAGTTGATGAAACTGCCATCGCAGCACCAAATAACCAGCCAGATGAGATGAATCAAATCCTGTTTAGTACAATGGTTCACAATCCACCTGACTTAAATCAAGCCATTCAGTCAGAGGCGAACCTTTCTACGCCCGACTTAAACCAAGCGAATCCACCAGACACTCTCCAAACTGTTGTTCAAGGCAGTGATAACGATGTAATACAGCCTTACAATATGGTTTTACTACTTCAGACAAACCAAACATCTGTGAACGTAAATTCTTCCTTAGAACAGCAAGAGAATGTATTTCTAGTTGATATAGGAAAGTTCTTCAATGAAGACACGTTCCTATCTACGGAATATGTAAATGCCCAACCAGAAAATCAGTCCGTAATCGAAATTCGTGCACCAACTCCACCATACTCAATGCCGACACGGCCAGAATTTATAAGCATCAGTGACTTAAACAATTACAGTAACAAATTAGCAAAAAACATTGTCGTTGTGTCCCACGAGAAGAACCCTGATAGCTGCGACAGTCTACCAGAAGTATATTTAAGCGATTCTGAGCCACATGGAGAAGAGTTTCTTATTCAGGAGGCCGGTGTCAAAATAGCGGAAAAAACCAAGGAGAAAGCCTCTAAAATGAAGCCTCCACATGCGTGCTCAATATGCAAAAAGATTTTCCAAAAGCCAAGCGATTTAGTTAGACATATTCGGACTCACACCAAGGAGAAGCCTTTCCGGTGTGATACTTGCTCAAAAGCGTTTAGTCTCAAATCTACGCTGGACAATCATAAACTTATTCATGAGAAGGATAGGCCAACGTTTGAGTGTCATGTGTGCGGGAAGAAATATGCTGCTAAAAATGTTCTCAATATTCATCTGCGATTGCATACTGGAGAGAGACCGTTTCAGTGTGAAATCTGCTCAAAGACATTCAGGACGTCTGGCCATAAGGCTGCCCATAATCGAGTACATGTAAAGGCGAAAATGGAAGCTGCGAGGAAAAGGAGGAGGACATAG
Protein Sequence: MGSNDTFSAIGRIGAGGSYEKSLFTFNEADTDFLSTNDFVALDLDGVVDSFKAAAAVTGHTTFADDGSGQFQDLVLENRGDKTVSEETNVSDHPAKVKKKRKKRAQGNVETKSFPCDLCDETFNISRELKCHKISMHRLAKLYRCEECSKAFNFPKNLFLHIATHSTAPATCPECGKVFQRISSFVGHIESHIENDNFKCQACDMEFEFEQYYERHIEKGHRGEEIMAALVIRKRRSRDDGIGFNGKYACKTCSKRFPKPSLLLRHEIAHAKVKPFVCVDCNKRFSQKCSLDRHRMLHSGIKPHNCPKCNMSFSQRTNLITHIKRAHTTKNTELQFPCDSCSCVFSKLKSLNRHKTLRHSSKTDTNKELSFTEILEHIMSLHEDNKAQLNPTSSNQATVLTDDQILPKKLANVDSVPASPPEKEQYVTVADCLYPTNERANQTLQEIKDDGVKKLECLNCPKRFQSSYDMVRHTRIHTKEKPFECEYCARKFTLKNTMKLHMQIHRKKPNEVTNLYHCTYCQKSFDSLRNLDLHVRIHSTYKPHICPICSKTFKSTNSLSKHKLNHGPKNPEDESIKRQLLPPIIQNTDDKPKEDQSVRTHQCTKCGIRFKKSSHLKQHEYSHLKLKNFQCKVCHKFFSTKSSLGFHQKIHLGHKTAACEVCHKQFCRNSDLKRHRTVHSNFRNFVCPYCKKAFKRKCNCQKHIKLHVKDVLIKEEVENVPLVSDTDSNIPEVDETAIAAPNNQPDEMNQILFSTMVHNPPDLNQAIQSEANLSTPDLNQANPPDTLQTVVQGSDNDVIQPYNMVLLLQTNQTSVNVNSSLEQQENVFLVDIGKFFNEDTFLSTEYVNAQPENQSVIEIRAPTPPYSMPTRPEFISISDLNNYSNKLAKNIVVVSHEKNPDSCDSLPEVYLSDSEPHGEEFLIQEAGVKIAEKTKEKASKMKPPHACSICKKIFQKPSDLVRHIRTHTKEKPFRCDTCSKAFSLKSTLDNHKLIHEKDRPTFECHVCGKKYAAKNVLNIHLRLHTGERPFQCEICSKTFRTSGHKAAHNRVHVKAKMEAARKRRRT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -