Ncya015166.1
Basic Information
- Insect
- Neoitamus cyanurus
- Gene Symbol
- sd
- Assembly
- GCA_947538895.1
- Location
- OX384543.1:27713068-27729509[+]
Transcription Factor Domain
- TF Family
- TEA
- Domain
- TEA domain
- PFAM
- PF01285
- TF Group
- Helix-turn-helix
- Description
- The TEA domain is a DNA-binding region of about 66 to 68 amino acids that has been named after the two proteins that originally defined the domain: TEF-1 and AbaA. The TEA domain is located toward the N terminus of eukaryotic transcription factors of the TEA/ATTS family. It shows a three-helix bundle with a homeodomain fold [3, 1]. Two α-helices are nearly anti-parallel and pack on either side of the third one, which is the DNA-recognition helix of the TEA domain. Phosphorylation of one or both of the two conserved serines found on the DNA-binding surface could interfere with DNA-binding activity, by introducing electrostatic repulsion and/or steric hindrance, and help regulate the transcription factor activity of the proteins [2, 1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.5e-18 5.7e-14 53.0 0.2 33 66 30 63 13 65 0.90
Sequence Information
- Coding Sequence
- ATGGCTGCAAATTTAGTCAATTGGGAATACTTCCTTTGTAAATACAAACACCAAGTGCTAGGTGGCGTCTTTTTAGACGAATTGAAGGAGCTCTCTGGACGGAATGAGCTGATAGCACGGTACATAAAGCTCCGGACGGGGAAGACGAGAACACGGAAGCAAGTCAGCTCACATATTCAAGTGTTAGCGAGGAGAAAATTACGAGAAATCCAGGCTAAATTAAAAGTTGATCACATTGGTGGCAAGGAGAAAGCACTTCAGACAATGTCGAGTATGTCAAGTGCACAAATTATTTCTGTGACGGCAGCCAAAGGTCTAACACTGGCCGGACCACCACCTCATCATCCCCTGCACCCACCGCTAGCTTATCCTGGCCAATTTTGGCAGCCGGGATTGCAGCCAAGTACTTCACAAGACATTAAGCCATTTGCACAACCACCATATCCCGCCGGTAAACCATCGACAGCTGTTTCAGGTGATGTTGAAGCAGGTCTCCCACCTGCGCAACCCCCTTGGGAAGGGAGAGCAATAGCGACGCACAAATTTAGATTATTAGAGTTTTCGGCCTATATGGAGATCCAAAGAGAAGAAATTTATCACAGGCACCTGTTTGTACAGATAGGAGGTAAACCGTCTTATTCAGACCCACTGCTAGAGTCTGTAGACATTAGGCAAATATCAGACAAATTCCCCGAGAAAACAGGCGGCCTTAAAGACCTTTACGATAAAGGACCGCAAAATGCTTTCTACCTAGTTAAATGTTGGGCGGACCTGAACACAAATATTACAGATGAAACGGGTGCCTTCTACGGCGTGACCAGCCAGTACGAAAGTAACGAAAATGTGGTGATAACGTGCTCAACGAAAGTGTGTTCCTTCGGTAAGCAAGTTGTAGAGAAAGTTGAAACGGAGTACTCAAGGCTGGAGAACGGTCGTTTCGTCTACCGCATCCACAAAAGTCCTATGTGCGAATACATGATAAACTTCATCCAAAAACTGAAAAACTTACCTGAGAGATATATGATGAACAGTGTTTTAGAGAATTTTACAATATTACAAGTCGTTTCAAACCGAGAAACGCAAGAAACCCTCCTGTGCATAGCATATGTATTTGAAGTGGCAGCGTCAAATTGCGGTGCGCAGCACCACATCTATCGGCTGATAAAAGATTAG
- Protein Sequence
- MAANLVNWEYFLCKYKHQVLGGVFLDELKELSGRNELIARYIKLRTGKTRTRKQVSSHIQVLARRKLREIQAKLKVDHIGGKEKALQTMSSMSSAQIISVTAAKGLTLAGPPPHHPLHPPLAYPGQFWQPGLQPSTSQDIKPFAQPPYPAGKPSTAVSGDVEAGLPPAQPPWEGRAIATHKFRLLEFSAYMEIQREEIYHRHLFVQIGGKPSYSDPLLESVDIRQISDKFPEKTGGLKDLYDKGPQNAFYLVKCWADLNTNITDETGAFYGVTSQYESNENVVITCSTKVCSFGKQVVEKVETEYSRLENGRFVYRIHKSPMCEYMINFIQKLKNLPERYMMNSVLENFTILQVVSNRETQETLLCIAYVFEVAASNCGAQHHIYRLIKD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00176354; iTF_00717765; iTF_01518951; iTF_00334054; iTF_00877054; iTF_00643179; iTF_00210770; iTF_00211589; iTF_00285395; iTF_01256374; iTF_01183804; iTF_00936512; iTF_00644058; iTF_01375803; iTF_00118653; iTF_00628320;
- 90% Identity
- iTF_00717765;
- 80% Identity
- -