Ncya023690.1
Basic Information
- Insect
- Neoitamus cyanurus
- Gene Symbol
- Cyp12b2
- Assembly
- GCA_947538895.1
- Location
- OX384541.1:21073142-21077783[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.8e-10 8.5e-07 29.4 0.0 2 38 12 48 11 54 0.89 2 2 5.7 6.3e+03 -2.2 0.1 31 42 308 319 307 321 0.75
Sequence Information
- Coding Sequence
- ATGCCGAAAAAAGGGCAAATCAGAAAGTGGAACCCAGGGAACATGGAGAAGGCTATTAGGGCTGTACGAACTAATGCAATGGGGATTCTCCTGGCTTCTAAAACATTTGAAGTCCCACACACCACACTACAGCGCATGGCGAGAAGCGGAAAACCAGTGCAGGATCTTCTATCAACGAAATTAGGCCGCAAGCTGACTTTCAACCAAGAAATTGAAAGTGATCTGGAAAATCCCGCGCCATCATTATCACCAAAAGAAAAATTGGAAATTGAATGGAATAATGCTAAACGCTATGAGGACATTCCTGGTCCAGGTAAATGGCAATTCCTGTTTTCCTTCATGCCAGGAGGGAAGTACCATGGATTTGGTTTTGTTGACCTCCACTACCAAATGCGTAAAGAGTATGGAGACATATTCAAAATACATGGGATGTTTGGAAGGCAGGATATCGTTTTCACATTCAACGTCGACGATTTTATTAAGGTGTATCGGAACGAAGGCATATGGCCGCTGCGATTTTTTATGGAATCACTTGCGTACTACAGGAAAACAATTAAGGCAGAAGTTTTTCAAGGGCTTGGTGGCTTAATTACAGACCAAGGAGAAACTTGGGCAGAGGTAAGAAATAAGGTGAATCCTATTCTAATGAAAACCCAAACAGTCAAACACCACTTACCTGCCGTTGATGCAATTGCCAAAGAGTTTATTGAAAGGATTGCAATAATTCGAAATCCCGAAACTCTGGAAATGCCAGCCAACTTTAACAATGAAATAAGGAAGTGGGCATTTGAGTCTATATGTGCAATTGCTATAGACAAAAAGCTGGATCTACTGATCTCAGAAACTCCTGATCCGAATGTGATGGAGTTGGTCCGTGCCTTGAATGCCTTCTTCCAACTCAGCTATCAATTTGATGTACAACCGTCCATTTGGAAATACTACAAAACGCGTAAATTCAAGAAGTTGATGACAACCTATGAAGAAATTACGACCATTATTACGGGTTATATCAATGAAGCGAAGCAGAAATTCGAAGACCAAGGAGATTCCAAAGAAGCTAAAAGCGTACTGGAGCAGCTCTTAAGGGTAGACAAACGAATAGCAGTTGTGATGGCCAGTGACATGCTTTTAGGTGGAATTGATACGACATCGTCAGGATTCACTTTTCTTCTTTACGCCCTTGCGAAAAATCCTGGTAAGCAAGAACGACTACGAAAGGAGATAATGACGATCCTGCCGGACAGAAACACTCCTATGACGCCAGAAAACACCATAAATATGCCATACCTTCGGGCATGCTTCAAAGAGTCCATGAGACTGCATGCCCTTGCACCAGGTAACTTCCGCAGATTGCCGCAAGAGTTGGTATTGTCTGGGTATCGGGTGCCCAAGAACACTGAAATCACCATGGGTTGGATGGTACTTTCCAATGAAGACAAATACTTCCCTAAAAGCGCGGAGTATATGCCGGAGCGGTGGCTTAAGCATGGAGAAGATGCCTGCCCTGCTGCTAAGACAAACAGTCCGTTTGTTTATCTGCCCTTCGGCTTTGGCCCACGCGCTTGTGTTGGAAGGAGATTTGCCGAGATGGAAATTGAAACAGCTATAGCCAATATAGTAAGGAACTACCATGTAAGCTGGAACTACCCAGATATGAAGTATGTAAGCCATTTGATTAATGAACCTGTCGGGGAGTTGAAATTTAAGTTTGAAGATGTATAG
- Protein Sequence
- MPKKGQIRKWNPGNMEKAIRAVRTNAMGILLASKTFEVPHTTLQRMARSGKPVQDLLSTKLGRKLTFNQEIESDLENPAPSLSPKEKLEIEWNNAKRYEDIPGPGKWQFLFSFMPGGKYHGFGFVDLHYQMRKEYGDIFKIHGMFGRQDIVFTFNVDDFIKVYRNEGIWPLRFFMESLAYYRKTIKAEVFQGLGGLITDQGETWAEVRNKVNPILMKTQTVKHHLPAVDAIAKEFIERIAIIRNPETLEMPANFNNEIRKWAFESICAIAIDKKLDLLISETPDPNVMELVRALNAFFQLSYQFDVQPSIWKYYKTRKFKKLMTTYEEITTIITGYINEAKQKFEDQGDSKEAKSVLEQLLRVDKRIAVVMASDMLLGGIDTTSSGFTFLLYALAKNPGKQERLRKEIMTILPDRNTPMTPENTINMPYLRACFKESMRLHALAPGNFRRLPQELVLSGYRVPKNTEITMGWMVLSNEDKYFPKSAEYMPERWLKHGEDACPAAKTNSPFVYLPFGFGPRACVGRRFAEMEIETAIANIVRNYHVSWNYPDMKYVSHLINEPVGELKFKFEDV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -