Basic Information

Insect: Neoitamus cyanurus
Gene Symbol: lov_1
Assembly: GCA_947538895.1
Location: OX384548.1:341815-348728[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 5.4e-18 5.9e-15 55.5 0.0 1 44 514 557 514 558 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	5.4e-18	5.9e-15	55.5	0.0	1	44	514	557	514	558	0.96

Sequence Information

Coding Sequence: ATGTCGACGCAGGACCACTATAgtctgaggtggaataaccaccagaaccacatccttagggctttcgacacactgctgcagactaagaccctggtggatgtcactctggtatgcgctgaaacaagcatccgagcccacaagatggttctttcggcgtgctcaccattttttcagcgcgttttttcagaaacaccttgcaaacatccggtcatagtcctcaaggacttccgcggctgggttgtccaggcgattgtggacttcatgtatagaggtgaaatcagtgtgccccaggaaaggttacagactttgattcaggctggtgaatcgctccaggtgcgcgggctCGTTGAAAACTCGGTTCCGGGAAACACACCTACCCCAGCTGCATCTCCAGATGACTTCAGCATGATGGACACATCCCTCCTACCCTCTGATTTAGGACGCTGTTCCAGTTATGACGACGAACCACCATCTATGGTAAACTCGAACTCAAAATTGCTACTTCCCTCGCATGTATTTTCGGACAACAACCACAGCGGACTTACATCGAATCCGGACTTGTGCACATCCCCAATGCCCAGGAGAAAACAGGCTCGACCGAGAAGGAGGTCGGGGGAGTGTGCTCCGCACGATCTAAGCAAGTCAACCACCCCTCCGCCTGAAGAGACTGATCTCAAGCCGGAAAGTAATCAAAACCAGGAAAAGACAAAGAACGAAGACGCCCAGCGCCCCATGCCTAACCTGGATGGAGACAATAACGTGCAACAGAGGAGTGAGGCCAGTCGGCAGGACAACTCAGAGGGACCTGAGAATCTTTGCACCAAAAAGACAAGTGAGGACATGCAGGGCGGGGAGTTGTGTGACAATAGTAATATCAACAACAACAACAGTAACAGTAGAATAGTCCTGTCCTTAAAGGACATCCGACAGCTCAATAAGCCACCCTCTACGACGCGATCACCGAATCCCTTTCACACCTCGCACCTGAACGTCCGCGGAGCCGATAGCCAAAGCATGAAGAGTGAATCGATGGAGGGGCGAATGGACAGTGACAGTCCTTTCCACATGGAGCAGGTTGATCTGTCCATGGCTGCTGCGGCTGCTGCTGCAGCCCAGCATCACCATCAGCAACAAATGGCGGCGAACAATATTATGAACATGGCGAACTCGCATCAGGCCCACGGACATGATCGAATGGAGGATAACTCGAATCGAATGAACAAAGATTTCACGCCGAGCTCTCCGATGAGTCTGCCGGCGCATTTTAACCCACCTGAGGGCCCACCACATCCCCCGTCGCCACTACCATTCCCTGGAATGTCATCAGCTCTAACGTTGACGCCGCCCCACATGTTCGGATTGGATTCACCACTAGGGCTATTCCCGCCAGGCATGGACCCCGGTAAACTGTACAACCCCCTGATGGAAATGTCGGACCCCAGAGGACTGCCCAATGACCACCCGCCTTTCCTAAAAAAGAAAATGTCGCGACCGAAAGGACAGCATTCTGCCCCGAGAGGCGGACCTCCCAGATCTTGGACCAATGCTGAGCTGACCGAGGCCCTACAACATGTGTGGAACAAAAAGATGACGACCAGCCAGGCGTCGCGGATCTTTGGTATCCCCTACAACTCGCTGCTGATGTACGTACGTGGAAAATACGGCAAGAGCCTGAAATTAGAGCAGCTGCGGAAGGATTGCATCAGCGGGCCGCCCATCGAGCTGCTCACGATGGGCATGAACAACAGCAATAATAATAATAATAATAACAACAAGGGCATGAACGACAACCGAAGCAAGGAGACAAAGGAGTTCGAAGGACCAATGCAACGCAGTTCCAGCTCAGAGCCGGATTTGCTGTCGAGCCCGAATCCACTATTCAACCCTTTCCCGCCTGGTTTCTACCCAGATTTTCCCAGCGGGTTCCCTGGACTGCCGCTTGGTATGCTGAACCTTCTACCACCGGAACGACATCAGCCCTCTATGCACATGAACATTGACGAGGACTGCAAGTCGGACCGGTCGAAGCAGTCACTTGAAGACGAGTTCCCTCAGCCACTCGCCCTCAATCGCGAAGATCGGCGCGAGATGTTGCAGCAGAACGGGCAGGATTGA
Protein Sequence: MSTQDHYSLRWNNHQNHILRAFDTLLQTKTLVDVTLVCAETSIRAHKMVLSACSPFFQRVFSETPCKHPVIVLKDFRGWVVQAIVDFMYRGEISVPQERLQTLIQAGESLQVRGLVENSVPGNTPTPAASPDDFSMMDTSLLPSDLGRCSSYDDEPPSMVNSNSKLLLPSHVFSDNNHSGLTSNPDLCTSPMPRRKQARPRRRSGECAPHDLSKSTTPPPEETDLKPESNQNQEKTKNEDAQRPMPNLDGDNNVQQRSEASRQDNSEGPENLCTKKTSEDMQGGELCDNSNINNNNSNSRIVLSLKDIRQLNKPPSTTRSPNPFHTSHLNVRGADSQSMKSESMEGRMDSDSPFHMEQVDLSMAAAAAAAAQHHHQQQMAANNIMNMANSHQAHGHDRMEDNSNRMNKDFTPSSPMSLPAHFNPPEGPPHPPSPLPFPGMSSALTLTPPHMFGLDSPLGLFPPGMDPGKLYNPLMEMSDPRGLPNDHPPFLKKKMSRPKGQHSAPRGGPPRSWTNAELTEALQHVWNKKMTTSQASRIFGIPYNSLLMYVRGKYGKSLKLEQLRKDCISGPPIELLTMGMNNSNNNNNNNNKGMNDNRSKETKEFEGPMQRSSSSEPDLLSSPNPLFNPFPPGFYPDFPSGFPGLPLGMLNLLPPERHQPSMHMNIDEDCKSDRSKQSLEDEFPQPLALNREDRREMLQQNGQD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00453727;
90% Identity: iTF_00936467;
80% Identity: iTF_01049784;