Npin000567.1
Basic Information
- Insect
- Neodiprion pinetum
- Gene Symbol
- Zmiz1
- Assembly
- GCA_021155775.2
- Location
- CM037740.1:4674642-4678282[-]
Transcription Factor Domain
- TF Family
- zf-MIZ
- Domain
- zf-MIZ domain
- PFAM
- PF02891
- TF Group
- Zinc-Coordinating Group
- Description
- This domain has SUMO (small ubiquitin-like modifier) ligase activity and is involved in DNA repair and chromosome organisation [1][2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.12 1.3e+03 0.1 0.7 4 24 442 462 439 467 0.88 2 2 5.8e-26 6.5e-22 77.9 3.6 1 50 524 573 524 573 0.98
Sequence Information
- Coding Sequence
- ATGGTGGCAGCGGCTACCGCCACGGCCACCGCCACTGCCAGCGTGGTGGCCATGCAGGACCGCCAAGACATCCCCGCACAGTATAACCAGATGCAGAGCCAACATGGAATGGCTCACCAGGCGTACAATACGGGGTACGCGCAGAGAGGAGCGATGGCTGGACTCGGACCGGTCGGTATGAATAACTTCAACAGCATGGGTTCCATGGGACCGATGCATACGATGAATTCTATGAATTCGATGAACGCGATGAGTGGTATGAATACGATGAACCCGATGACTATGGGGGGCATGAACGGGATGAACGGTATGAACGGAATAAGTCCGATGAACTCGATAGCGAACATGGGCAACATGGGGATGAACAACATGATGGGACCCAACAATATGCAGATGAACAAGATGAACATGCAGGCGCAGACTCAACAAGCTTACCCGAGGAGGTTAGCGCCGTATCCTAATCCAGCAATGCACATGGCGCAAAAGAGGCAGCAAAATCCTTACCCGGGACCGAATCCAGGGGCAATGCAGCCGGGCTTCAACGGGATGCCCAATAATCAGTATGCGAACGCGTACGCCGGTAGTCGGCCAAGCTTTCAATCTCAGTATCAACCGATGCAGGGAATGAATCCTGGCAACGCTGGCTTCGGACCGAATTCCATGATGCGAGGCACCACGATGAGACAAGCTAACCCGTCTTACAACCCGGCGGCACAAGCCAATCAGTATTACGCGAATAGCGGAGTCCCGACTAACATGGGACCCACCTCGGTGAACAACCAATTTGTCGGTCACCAGCAGACACCTGGTTATGCTGGTACGTCGCCGTACGCAGCTACCAGCCAGTATCAACAGGATGTCGCGACAATGAGGACGAACGGTGCCGGAAACATGAGCTACCAGCATAGTCCTATACCTGGGAACCCGACTCCTCCTTTAACTCCTGCTACCAGTATGACACCTTATATCAGCCCCAATCCAGATATAAAGCCGAATTTTAACGAGATCAAGTCACCGGTTAATATTCAGAaGGACGACGAGCTGAGATTAACATTCCCTGTGAGGGATGGTATCATACTTCCACCCTTCCGGCTAGAACATAATTTGGCCGTCAGTAACCACGTATTCCAGTTGAAAACCACCGTTCATCAGACGCTAATGTGGCGATCCGATCTTGAGCTACAATTAAAATGCTTTCATCATGAAGACAGGCAGATGAATACCAATTGGCCGGCAAGCGTTCAAGTATCGGTCAATGCGACCCCGCTGGTTATCGATAGAGGGGAAAACAAAACATCCCACAAACCACTTTACCTTAAAGATGTGTGTCAGCCGGGGCGAAACACAATACAAATCACAGTTTCTGCATGCTGCTGTTCACATCTATTCGTCCTACAATTAGTTCATCGGCCAAGCGTACGGAGCGTTCTGCAAGGGCTTTTACACAAGAGGTTACAAGCTGCGGAAATCTGCATAGCTAAGATAAAGCGAAACTTCAACAACACGTTATCGAATAACGGTATGCAATCTGAGAGGGAGCGAGACGTTGTGGAGCAAACAGCACTGAAGgTATCATTGAAATGTCCTATTACTTTCAAACGGATTACACTACCTGCACGGGGCAATGATTGTAAACATATACAATGCTTCGATTTGGAATCCTATCTACAACTGAACTGCGAAAGGGGATCGTGGCGATGTCCTGTTTGCAACAAACCTGCACAACTCGAAGGATTGGAAGTAGATCAGTACATGTGGGGAATTTTAAATACTACTCTAAATACGTCAGAGGTTGAAGAGGTAACGATAGATTCGGCAGCAAGCTGGAAACCTGCTAAGAGTGTGACAGGTATAAAATCTGAGGAGGACAACGACTGCAAGAGAATGAGCAAAGCTATGTCGCCCGGTAGTATGAATATGCCAACAATGAACAACTGGGACATGAATCAGGCAATGAGTCCCTACATCGCACCCGACATGAACAGCATTGCTAGCGGGTCTATGATGAATAATACTCCCCCTGCGTATGCCAACAATAATATGAATCATAGGAATTCGTCCAGAGGATCTTACGACATGAATCCAGGAACGAATAACAGTAGTAATAACGATTACTCCAGTGGCGCAGGTCCGCTGTCGCATCTAAGTGACTCCGTCAATTCTCTTGATCCTCTGAACGCAATGGAGAAGACTCTTAACGATCAGATGCCGCACACACCTCACACGCCACACACACCCCACACACCTCATACGCCTGGCGGTGGAAACAGCGGACCACCGAGCGTACCTCCATCATCTCAAGAGTCGACTGGAAACCACAATCCTTCCGGAAATACAAGTACAAATATCAACAACGACTCGGCAGACATACCTTCGGACCTCAACTTTGACCCTGCAGCTGTTATAGATGGAGAGGGAACTGGGCAAGAGGCATTGAATCTATTGCCTGACAACGTCGTAGACCCAATGGAATTACTCTCATACTTGGATCCGCCCGATCTTAATACACCACCGAGTAGCGGAGCAAGCAGTGGAAATCCTTCGTCTAGCGACGATATACTTGCACTGTTTGAATAA
- Protein Sequence
- MVAAATATATATASVVAMQDRQDIPAQYNQMQSQHGMAHQAYNTGYAQRGAMAGLGPVGMNNFNSMGSMGPMHTMNSMNSMNAMSGMNTMNPMTMGGMNGMNGMNGISPMNSIANMGNMGMNNMMGPNNMQMNKMNMQAQTQQAYPRRLAPYPNPAMHMAQKRQQNPYPGPNPGAMQPGFNGMPNNQYANAYAGSRPSFQSQYQPMQGMNPGNAGFGPNSMMRGTTMRQANPSYNPAAQANQYYANSGVPTNMGPTSVNNQFVGHQQTPGYAGTSPYAATSQYQQDVATMRTNGAGNMSYQHSPIPGNPTPPLTPATSMTPYISPNPDIKPNFNEIKSPVNIQKDDELRLTFPVRDGIILPPFRLEHNLAVSNHVFQLKTTVHQTLMWRSDLELQLKCFHHEDRQMNTNWPASVQVSVNATPLVIDRGENKTSHKPLYLKDVCQPGRNTIQITVSACCCSHLFVLQLVHRPSVRSVLQGLLHKRLQAAEICIAKIKRNFNNTLSNNGMQSERERDVVEQTALKVSLKCPITFKRITLPARGNDCKHIQCFDLESYLQLNCERGSWRCPVCNKPAQLEGLEVDQYMWGILNTTLNTSEVEEVTIDSAASWKPAKSVTGIKSEEDNDCKRMSKAMSPGSMNMPTMNNWDMNQAMSPYIAPDMNSIASGSMMNNTPPAYANNNMNHRNSSRGSYDMNPGTNNSSNNDYSSGAGPLSHLSDSVNSLDPLNAMEKTLNDQMPHTPHTPHTPHTPHTPGGGNSGPPSVPPSSQESTGNHNPSGNTSTNINNDSADIPSDLNFDPAAVIDGEGTGQEALNLLPDNVVDPMELLSYLDPPDLNTPPSSGASSGNPSSSDDILALFE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00863647;
- 90% Identity
- iTF_01412778;
- 80% Identity
- iTF_01048572;