Basic Information

Insect: Neodiprion pinetum
Gene Symbol: Zbtb41
Assembly: GCA_021155775.2
Location: CM037740.1:24847133-24850101[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.37 56 5.4 0.1 2 13 135 146 134 157 0.76

2 15 0.0068 1 10.8 0.3 2 23 162 184 161 184 0.95

3 15 0.22 33 6.1 0.2 2 23 242 263 241 263 0.95

4 15 3.6 5.4e+02 2.3 7.8 2 23 269 291 269 291 0.97

5 15 3.9e-06 0.00059 21.0 0.6 1 21 301 321 301 322 0.95

6 15 0.011 1.7 10.2 11.2 1 23 331 353 331 353 0.97

7 15 0.00019 0.029 15.7 0.7 1 23 366 388 366 388 0.98

8 15 0.00017 0.025 15.9 1.8 1 23 396 419 396 419 0.95

9 15 1.2e-05 0.0018 19.5 4.7 1 23 425 447 425 447 0.98

10 15 0.0016 0.24 12.8 1.1 1 23 450 473 450 473 0.95

11 15 0.016 2.4 9.7 0.2 1 23 491 513 491 513 0.98

12 15 0.00011 0.017 16.4 0.9 1 23 519 541 519 541 0.98

13 15 5.2e-07 7.9e-05 23.8 4.7 1 23 546 568 546 568 0.98

14 15 6.8e-06 0.001 20.3 3.6 1 23 576 598 576 598 0.97

15 15 0.00076 0.11 13.8 0.6 1 23 604 626 604 626 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.37	56	5.4	0.1	2	13	135	146	134	157	0.76
2	15	0.0068	1	10.8	0.3	2	23	162	184	161	184	0.95
3	15	0.22	33	6.1	0.2	2	23	242	263	241	263	0.95
4	15	3.6	5.4e+02	2.3	7.8	2	23	269	291	269	291	0.97
5	15	3.9e-06	0.00059	21.0	0.6	1	21	301	321	301	322	0.95
6	15	0.011	1.7	10.2	11.2	1	23	331	353	331	353	0.97
7	15	0.00019	0.029	15.7	0.7	1	23	366	388	366	388	0.98
8	15	0.00017	0.025	15.9	1.8	1	23	396	419	396	419	0.95
9	15	1.2e-05	0.0018	19.5	4.7	1	23	425	447	425	447	0.98
10	15	0.0016	0.24	12.8	1.1	1	23	450	473	450	473	0.95
11	15	0.016	2.4	9.7	0.2	1	23	491	513	491	513	0.98
12	15	0.00011	0.017	16.4	0.9	1	23	519	541	519	541	0.98
13	15	5.2e-07	7.9e-05	23.8	4.7	1	23	546	568	546	568	0.98
14	15	6.8e-06	0.001	20.3	3.6	1	23	576	598	576	598	0.97
15	15	0.00076	0.11	13.8	0.6	1	23	604	626	604	626	0.97

Sequence Information

Coding Sequence: ATGGAAGGGACAGCTAATGAAGAGAAAGAATTAGTGGAAATGTGCCGCTTGTGCGCCAAAACTGGTTTGGGATATATTCCAATTTTCGCTGACAAGAATTCTGCAGTCGCTGAAAAAATAAGCAGATGTCTACCTATAATTgtGCTGATGACTGATGAGTTACCATTATTTGTATGCCAAAACTGCTTTTCTTACTTGAACATTAGTTATAAACTAATTGTCGATTCTATAAAAACTGATACTCTTTTGCGATCACAGTTGGCATCATTGAATAAACCAGATTGTTCTGGTGCGAAAAGCGATACAGAAGAAATAGCACAAGAAGTTACAGTTAAAATAGATAGTAGTCAGCTATCCAAACAATACATAGAAGAATTTGACGAAAGTTTAAAAGTTCCGATAAAATGTGACCTGTGTGACAAGATATTCGAggatatgaatatatttgataCCCACATTGAAGAGGATCATCTATTGGAATGGCCATGTAATTTTTGCGACAATAGTTACCGAGAGTCCAGAGATCTGTTGGCGCATAAAGAAACCAGTCATTACGGGGAAATCACAACCTGTGCAAACTGTACCAATCGAAAAGCCAACAATTCACTAGCTGTATGTAAATCTGAATCAATGGATTTATCAGATGTTCACGAGGAACGTTTAGGCACTGCATCAGAGACGGTGACACCAGAAATAAAACTGGCTAAAAATTCTCTGGAAGTAATGTGCAAAGTATGCAAAATTACCGTAGAAAATTCAAAGCTCCTTCCTAAGCATTACAGTATTCACAGAAGGAAAATTGCCAGATGCCATACCTGCCAAACACGGTGTCATTCAGTCTATGACTTGTTTTTACACAAAAGGTCGGCTCATAATATGTACAAAAAAGTTAACTTAAGGTTTGTATGCGACATgtgtgataaaatattttcaaacagttcACAATGGCAACACCACATGGATAAGGCATGTCCTAGAAAGTTTTCTGTTCATTCTTGCAagtattgtaaaaacagtttttcaacACATCACAAACTTACGTATCATCTTAGGAAACATAAAAAGGAAATGCTGGACGATCCTGATGTAACTGTATATAAATGTGTCGCATGTCCTAAAGTATTTGTGGACCAACAATTTTACCAGAAACATAGAAATGTACACGATCCAGAATGCTGGGACAAGTTCAAATGCACCCTATGCAATCGATCTTTTAGAGACAGAGTTAGATTGAAAGAACACAATCAATCTGTTCATGAAGGAGTTAGACCTCATCAATGCGATGTTTGTGGTCGTATGTTTCATCGTTCATCTAACATGAAGGCTCATAGAATGAAACATTTTGGCCATAAGTGCTCCCAGTGTGAAGAAATATTCCAAACTGTACGTCTACTTACCAATCATATGCAGGACGTTCataaaattgaagtaaatttaaaaaacccTGCAAAAAAATACAGTAGTAGTTGCTACGTTTGTAGATTTTGTGGGAAACAACTTGCCACCAATCAGTCGATCCTTGATCACGAACGCATTCACACTGGTGAAAAACCCTACAGCTGTAATTTGTGCGATAAGACTTTCAGAAGTTATACCGCCAGATGGGCTCATGTTCAACGCCATAAAAAAGGAAGTTACGTATGTGAGCATTGCGGCAAATGCTTCAGTTACAAACAGAACTTGACCACCCATGTGCAAATACATGTTCCCAATGAAGAACGGAAGCACCCATGTTCAAAATGCGGCAAACGTTTCCTGAGGAAGGCGCACCTCAATGTGCACATGCGTATTCATGACGGAGTGCGTCCCTATGCTTGTGACATCTGTTTGTTTAGGTTTACACAATTAGGAGACATGAAACGGCATCGTGCGAGACACGCAAATGGTGAAGTTCGCTTGAGTTTTCCCAGAAGGAAAACAGTGCAAGAAGATTTGCAAATCGATGGATATGGTGCTGCAGCACAGAAACtttaa
Protein Sequence: MEGTANEEKELVEMCRLCAKTGLGYIPIFADKNSAVAEKISRCLPIIVLMTDELPLFVCQNCFSYLNISYKLIVDSIKTDTLLRSQLASLNKPDCSGAKSDTEEIAQEVTVKIDSSQLSKQYIEEFDESLKVPIKCDLCDKIFEDMNIFDTHIEEDHLLEWPCNFCDNSYRESRDLLAHKETSHYGEITTCANCTNRKANNSLAVCKSESMDLSDVHEERLGTASETVTPEIKLAKNSLEVMCKVCKITVENSKLLPKHYSIHRRKIARCHTCQTRCHSVYDLFLHKRSAHNMYKKVNLRFVCDMCDKIFSNSSQWQHHMDKACPRKFSVHSCKYCKNSFSTHHKLTYHLRKHKKEMLDDPDVTVYKCVACPKVFVDQQFYQKHRNVHDPECWDKFKCTLCNRSFRDRVRLKEHNQSVHEGVRPHQCDVCGRMFHRSSNMKAHRMKHFGHKCSQCEEIFQTVRLLTNHMQDVHKIEVNLKNPAKKYSSSCYVCRFCGKQLATNQSILDHERIHTGEKPYSCNLCDKTFRSYTARWAHVQRHKKGSYVCEHCGKCFSYKQNLTTHVQIHVPNEERKHPCSKCGKRFLRKAHLNVHMRIHDGVRPYACDICLFRFTQLGDMKRHRARHANGEVRLSFPRRKTVQEDLQIDGYGAAAQKL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01048396; iTF_01048365;
90% Identity: iTF_01048396; iTF_01048365;
80% Identity: -