Npin021613.1
Basic Information
- Insect
- Neodiprion pinetum
- Gene Symbol
- CSRNP3
- Assembly
- GCA_021155775.2
- Location
- CM037744.1:21201271-21205602[-]
Transcription Factor Domain
- TF Family
- CSRNP_N
- Domain
- CSRNP_N domain
- PFAM
- PF16019
- TF Group
- Unclassified Structure
- Description
- This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.2 2.1e+04 -4.0 1.1 48 79 140 171 120 204 0.46 2 3 6.8e-99 1.1e-94 317.3 5.8 1 218 458 668 458 668 0.92 3 3 0.59 9.9e+03 -2.9 0.8 105 109 951 955 891 989 0.45
Sequence Information
- Coding Sequence
- ATGGAATCGCTTTCGGCGCCTGACCGCGGTGTAAACGTGGACCGAGAAGATGCGAGAACATCGGAACCGGGTTCGTCTTCGTTAGGGTCGACGACAACCGAAGGCAATCCTGAAAGCGGAACGAGTTCGTTGGTACCTGAACCGAGTGAGCATCAGCAAGCAATTTCAGTTCCTGCCGATTTCCTGCCGATAAAAATGGAGATAAAGAAAATGGGGGTTGAGATATCGGACGAGAGGGCCGAGCAGTTGAAGAACGACGTGAGGAGACTGTCGCCGGAAGTTGTGAGCCTTAGGGAAAGAACCCTCGGTGAAATATCCTTGACACCAGATTCCACCTTCTACGAGGTAGCGAGCGATGCCAACGATGAAGAGATTTCAAACGAGCAAAAAGGCTCAGAATCGACACCCAGCAGTGCCGAGAAGCACCTGATCGCTGAAGAAGACCTTCGAGTCCAGCTTTCGAGGCACCAAGAAACGGAGCATGAGTCGTCGTCGTGGTGGTCCCGAAAAGTGAAGTGCGATTCGGAGGTTGTTAGTGGTGAGGAACTGGTGATGATCGCGAGAAACGATGAGAAGGCTGAGAATAGTGAATCCGGGAGTGTTGGTGAAGTCGAGTACGGTGTTGGCAGGACTGAGCAAACGCCCTCGAGTCCGAGGGCTGTGATTCAAAAACTCGTCGAGGGTGAGGAAATAGTCTTTGCTGGTGCTGACGTCGCCTGCGTCCAGCTCCAGGCCTCGTCGATGACGAATGGTCTCGACTTTATCGTCGCCTATCCGGAAGCAAGTCCCTGCAGCTCGACCGAAAGCGCTGAGGACCCCCTTAGGGACGCTGAAACCGAGACGGACTCGGATTGCAGCTCTGAGCCCGCCGCGATCTGTGCCGCGACGGAGCCCGTTGAGTCGCTTCAAACTCGCGGCGACTCGACGGACATAATCGTCGACTGCGACAGGGTTCAATCGGACAGACCGCAGACCTTCACTGAAGATTCGGCCGAGAGTCTTGCCCTCGCCGCCGGTGCCGGGGACGAAGTTAGGTCAGATGGAAGCGATTCTGGACTAGGCGGCGAAATCGCTGGCGAACCTGGACCAGCTCCTGCCCCAGAAAGTGACTCGGAAACTTCCTTTCTTGACAGGATACCCAACGAAATACTCTCTAATAAGGACAAAGCGTCCGAACAACTGGAGACCTTTGTACCGGTCAAAGGAGACGCGGAAATGATGACTGGGTCTGAGGTGCAGAGGCCCGACCTCTTGGCGATCCCGATACTCCCTGCACTTCAAAGTCCACCGAAAAGCAACCTGAAGAGGCGGTTGACCGACTGCATGGAGGGTGAACCAGACGCGAAGAGGTTGAACCCTGACGAGTCGCAGAAAAAGAAGCGGAACATCCAATTCGACGCGGTGACGGTTTACTATTTCCCGAGGGCGCAGGGTTTCACCTGCGTGCCGTCACAGGGAGGAAGCACGCTTGGCATGAGCGCGGCCCACACTCATGCTGAGAGGTTTTCGCTGACGGAACACGCGGCCGAACAGCGGCGGATTCACCGTGCCAGGCTAGCTCAGTTGCGCTCAGAACGGGCTGCGAACAACGTTGTTGAAGCTGCTTCGAGCTCCGAAGATCCCAGTGACGACACCGACGAGGAACCCAGTGACACTGAGGAACTCGACATTGACAGCTACTACTTTCTCCTCCCTGTTCCCACCTGGCAGAGACGGGCCCTTCTCAGAGCTGCTGGGGTGCAAAAAATCGACACTGTCGAAAAAGACGAGTGTCGTGACATTCGGGCCAGTAGGAAACACTGCGGCTGTGGGTGCAAAGGCTATTGTGACCCTGAAAGCTGCCCTTGCAGCAGGGCTCACGTTAAATGTCAGGTGGATCGTGCTGGTTTTCCTTGTGGCTGTTCGCGCGACGGCTGCGCGAACAGTTCGGGCAGGATAGAGTTCAACCCAGTAAGAGTTCGGACGCACTTTATTCACACACTGATGCGTTTGGAACTGGAAAAGAAGCACCGAGACGAGGACTGCACTGACCTTCATGACCTTGATGCGCAGCGGGGTTTGCCAGTCGGCATGGATGGCGTCGAAGGTTCCTGCGCGGTGAATGGAGGCGGGTTTACGACCTTGCACTACACGAACCCTCCACAGGAAGCCGGCTCCTGTCAGCAGCCCGAGATACCGGGGACCAGGGAAGACAGTCTGGACTTGTACGCCATTCGGGATGACTGTTACCAGACATGCAGTGAGGATACCGTTGATAGCGGAGCTCAAGGTCAGCCGcagcaccaccaccaccaccaccaccaccaccatcatcatcaccagAGAAAGCTTCTTCATCCAACCGAGTTTGTGGGTCCACCGTTCCAGCAGTTTTCCAACGGCGGAGACGCGGCTCATTCTGTTCAACAGTTCCAGCAGAACACCTACCAGGACTACCAGTCCTACCAAACGCTCCCGTCTACTTCCAGGGGACAGTTTCATCATCAATTTCAATCCGTCAGTCACACGCCTCAAGCGTTTTCTCACTATGGCGGCTACGTCACGGATCCCATGGGTGCCGGTAACGTGGTGACATCGATGTCGGTTGCTTGTCACCAGCAGGCGCCATCTAATTACGAAACAAACTACGTCCAGCAGGACGAGGGCCCGCCGTCACATTATACGAACCTGAACTCTGTTCAGCAGCCAACAATGAGCTCAGTCCACCATCAGCACCACCATCAGCATCACCAGCAGCTCGGGAAACTTGAACCTTTCTCGGAACTGCTGGCGGGTCGTTATTCGTACTACGGCGAAGTGGAGTCGACAAGTCACCAGATCTCGTACCCTACGATGCAGCAGCCTGACAAAGCAAATTCAGAGGATGACAAATCGCTCCAGCATCAGCAGCCTGAAACCAGCCAGCCGCAAATGACAGGACAGCAAAACAGCGGCGAGGATTGCAGTGACGAGAACTTTggtgaaattataaaaaaatccatGGTTGAAACTGTCTCAGCGTAA
- Protein Sequence
- MESLSAPDRGVNVDREDARTSEPGSSSLGSTTTEGNPESGTSSLVPEPSEHQQAISVPADFLPIKMEIKKMGVEISDERAEQLKNDVRRLSPEVVSLRERTLGEISLTPDSTFYEVASDANDEEISNEQKGSESTPSSAEKHLIAEEDLRVQLSRHQETEHESSSWWSRKVKCDSEVVSGEELVMIARNDEKAENSESGSVGEVEYGVGRTEQTPSSPRAVIQKLVEGEEIVFAGADVACVQLQASSMTNGLDFIVAYPEASPCSSTESAEDPLRDAETETDSDCSSEPAAICAATEPVESLQTRGDSTDIIVDCDRVQSDRPQTFTEDSAESLALAAGAGDEVRSDGSDSGLGGEIAGEPGPAPAPESDSETSFLDRIPNEILSNKDKASEQLETFVPVKGDAEMMTGSEVQRPDLLAIPILPALQSPPKSNLKRRLTDCMEGEPDAKRLNPDESQKKKRNIQFDAVTVYYFPRAQGFTCVPSQGGSTLGMSAAHTHAERFSLTEHAAEQRRIHRARLAQLRSERAANNVVEAASSSEDPSDDTDEEPSDTEELDIDSYYFLLPVPTWQRRALLRAAGVQKIDTVEKDECRDIRASRKHCGCGCKGYCDPESCPCSRAHVKCQVDRAGFPCGCSRDGCANSSGRIEFNPVRVRTHFIHTLMRLELEKKHRDEDCTDLHDLDAQRGLPVGMDGVEGSCAVNGGGFTTLHYTNPPQEAGSCQQPEIPGTREDSLDLYAIRDDCYQTCSEDTVDSGAQGQPQHHHHHHHHHHHHHQRKLLHPTEFVGPPFQQFSNGGDAAHSVQQFQQNTYQDYQSYQTLPSTSRGQFHHQFQSVSHTPQAFSHYGGYVTDPMGAGNVVTSMSVACHQQAPSNYETNYVQQDEGPPSHYTNLNSVQQPTMSSVHHQHHHQHHQQLGKLEPFSELLAGRYSYYGEVESTSHQISYPTMQQPDKANSEDDKSLQHQQPETSQPQMTGQQNSGEDCSDENFGEIIKKSMVETVSA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01048220;
- 90% Identity
- iTF_01048220;
- 80% Identity
- -