Npin018285.1
Basic Information
- Insect
- Neodiprion pinetum
- Gene Symbol
- Iswi
- Assembly
- GCA_021155775.2
- Location
- CM037743.2:33193833-33196868[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.1e-05 0.021 15.8 0.0 3 41 800 839 799 839 0.96 2 2 0.0046 8.6 7.4 0.0 3 21 902 921 900 924 0.90
Sequence Information
- Coding Sequence
- ATGTCCAAGCCGGAGACGGAAAATGCCGACGCTGTCGAAACGGGGGAGAATTCAAACGGATCGTCAGCAGAAACAACATCTTCTAGGGGTGGCGATTTCGAAACCAAACTGGAGACCGACAGGAGCAAGAGGTTTGATTACCTACTAAAACagaccgaaattttttctcattttatgaCGAATAATCAGAAAGACAAAAGTGTCAGTCCTCTTAAAGTTAAAGCTGGGAGACCTAGGAAGCAGCCCGAGATTCCTGTCAAAGGTGACACGTCGGCTGATCTCAGACATCGAAAAACTGAgcaagaagaagatgaagagcTCCTTGCTGAGAGCAATGTCAGTGTTGCGCCAACGACTCGTTTCGAGTCATCCCCCCATTATATAAAATCAGGAGAGCTGAGGGACTACCAGATTCGTGGTCTTAACTGGATGATTTCGCTCTATGAGAATGGAATCAACGGTATACTGGCAGATGAAATGGGTCTTGGAAAAACCCTTCAGACGATTTCATTGCTAGGATACATGAAGCATTTCCGCAGCATTCCAGGACCTCACATTGTAATTGTCCCAAAGTCAACGCTAGCCAACTGGATGAATGAATTTAAGAAATGGTGTCCCTCGCTGAGAGCTGTTTGTCTGATTGGAGACGCTGAGACAAGGAACACGTTCATCAGAGACGTAATGATGCCAGGGGAGTGGGATGTCTGCGTAACGTCTTATGAAATGGTAATAAAGGAGAAATCAGTATTCAAAAAGTTTAACTGGAGGTATATGGTAATCGATGAGGCTCATAggataaaaaatgagaaatcaaAGTTATCAGAAATTTTGCGCGAGTTTAAGACTGCCAATAGACTTTTACTCACCGGCACACCGTTACAAAATAATCTTCACGAGCTATGGTCACTCTTAAACTTCTTATTACCAGACGTGTTCAACAGCTCAGACGACTTTGACTCCTGGTTCAACACCAACAGTTTTCTTGGAGATAATTCTTTGGTTGAAAGGCTGCATGCTGTCTTAAGACCATTCCTTCTTAGACGCCTCAAGGCTGAAGTAGAGAAGGGACTTAAGcctaaaaaagaaatcaaagttTACATTGGACTGAGTAAAATGCAGAGGGAATGGTATACCAAAGTGCTAATGAAGGATATCGACATTGTAAACGGtgctggaaaaattgaaaaaatgagattACAAAACATTCTTATGCAGCTACGAAAGTGCTGCAATCATCCATATTTGTTTGACGGAGCTGAGCCGGGCCCTCCGTATACCACTGACGAACATTTAGTTTATAATTGTGGAAAGATGGTGATCCTTGATAAACTACTGCCAAAATTGAAGCAGCAAGACTCGAGGATATTGATATTTAGTCAAATGACTAGGATGCTTGATATTCTTGAAGATTATTGCCATTGGAGAAGTTTTCAATATTGCCGATTGGATGGTAACACGGCTCATGAAGATCGACAGCggcaaataaatgaatataatgcTCCCGGGAGCGAAAAGTTCATTTTCATGTTATCCACAAGAGCAGGAGGTCTTGGTATTAATTTAGCTACGGCTGACGtagttattatttatgattcTGATTGGAATCCTCAAATGGATCTGCAAGCTATGGATCGAGCACATCGAATCGGCCAACAGAAACAAGTGCGAGTGTTCAGGTTCATAACTGAGAATACAGTAGAGGAAAAGATTGTCGAACGTGCCGAGGTCAAGTTGCGCTTGGATAAACTTGTTATTCAGCAGGGCAGACTAGTAGATGCGAAACAAACAGCTTTGAACAAGGATGAGATGCTCAACATGATTAGACATGGTGCTAATGAAGTATTTGCTTCTAAAGACAGTGCCATAACGGATGAAGATATTGATACGATACTTCAGAAAGGAGAAGCTAAAACAGAGGAAATGAAACAGAAGTTGGAAAATTTGGGTGAATCATCCTTGAGAAATTTTACAGTAGATGCACCGACCGATTCAGTCTACCAATTTGAAGGTGAGGATTATAGGGAGAAGCAGAAAATATTAGGTATAGGCAACTGGATTGAGCCGCCTAAACGCGAGAGAAAGGCAAATTATGCAGTCGATGCTTACTTCAGAGAAGCGCTAAGAGTCTCAGAGCCAAAAGCTCCAAAGGCACCAAGACCTCCGAAACAACCAATTGTTCAagatttccaattttttccgCCACGATTGTTTGAGCTACTCGATCAAGAAATATATTACTTCAGACAAACAGTTGGGTACAAAGTACCAAAAAACCCTGAACTTGGATCCGACGCAGGAAGGATTCAAAAGGAAGAGCAGCGAAAAATTGACGAAGCTCAGCCACTTACAGACGAGGAATTgacagagaaagaaaaactgcTTACTCAGGGATTCACAAACTGGACGAAGAGGGATTTCAACCAATTCATAAAGGctaatgaaaaatatggtcGAGATGACATTGAGAATATTGCCAAAGATGTTGAAGGAAAATCTCCTGAAGAAGTAATGGAGTATTCTGCTGTCTTTTGGGAACGTTGCCACGAACTTCAAGACATTGACAGAGTAATGGCTCAGATAGAGCGAGGAGAAGCAAAAATTCAGAGACGTGCCGGTATAAAGAAAGCTCTGGATGCAAAAATGGCCAGATATAGAGCACCATTCCATCAGCTAAGAATAGCTTATGGAACAAAcaagggaaaaaattataccgaagAAGAGGACAGATTCCTTGTATGCATGTTGCATAAACTTGGATTTGACAAAGAAAATGTATACGAAGAACTCAGAGCAACCGTAAGATCTGCACCACAATTTCGCTTCGATTGGTTTGTCAAGTCAAGAACAGCTCTAGAACTCCAACGAAGATGTAACACTTTGATAACGCTAATTGAACGTGAAAATCTAGAGCttgaagaaagagagagacaagAGAGACGAAAGAAGGGTGGAAGTATTGGATCAAAACCAGCGTCCAAACGGAAGCAAGAGAATCTTCCAGCACCTCAAGATAAACctaggaagaagaagaagtaa
- Protein Sequence
- MSKPETENADAVETGENSNGSSAETTSSRGGDFETKLETDRSKRFDYLLKQTEIFSHFMTNNQKDKSVSPLKVKAGRPRKQPEIPVKGDTSADLRHRKTEQEEDEELLAESNVSVAPTTRFESSPHYIKSGELRDYQIRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMKHFRSIPGPHIVIVPKSTLANWMNEFKKWCPSLRAVCLIGDAETRNTFIRDVMMPGEWDVCVTSYEMVIKEKSVFKKFNWRYMVIDEAHRIKNEKSKLSEILREFKTANRLLLTGTPLQNNLHELWSLLNFLLPDVFNSSDDFDSWFNTNSFLGDNSLVERLHAVLRPFLLRRLKAEVEKGLKPKKEIKVYIGLSKMQREWYTKVLMKDIDIVNGAGKIEKMRLQNILMQLRKCCNHPYLFDGAEPGPPYTTDEHLVYNCGKMVILDKLLPKLKQQDSRILIFSQMTRMLDILEDYCHWRSFQYCRLDGNTAHEDRQRQINEYNAPGSEKFIFMLSTRAGGLGINLATADVVIIYDSDWNPQMDLQAMDRAHRIGQQKQVRVFRFITENTVEEKIVERAEVKLRLDKLVIQQGRLVDAKQTALNKDEMLNMIRHGANEVFASKDSAITDEDIDTILQKGEAKTEEMKQKLENLGESSLRNFTVDAPTDSVYQFEGEDYREKQKILGIGNWIEPPKRERKANYAVDAYFREALRVSEPKAPKAPRPPKQPIVQDFQFFPPRLFELLDQEIYYFRQTVGYKVPKNPELGSDAGRIQKEEQRKIDEAQPLTDEELTEKEKLLTQGFTNWTKRDFNQFIKANEKYGRDDIENIAKDVEGKSPEEVMEYSAVFWERCHELQDIDRVMAQIERGEAKIQRRAGIKKALDAKMARYRAPFHQLRIAYGTNKGKNYTEEEDRFLVCMLHKLGFDKENVYEELRATVRSAPQFRFDWFVKSRTALELQRRCNTLITLIERENLELEERERQERRKKGGSIGSKPASKRKQENLPAPQDKPRKKKK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00305004;
- 90% Identity
- iTF_00983554;
- 80% Identity
- iTF_01048171;