Npin000653.1
Basic Information
- Insect
- Neodiprion pinetum
- Gene Symbol
- snpc-4
- Assembly
- GCA_021155775.2
- Location
- CM037740.1:5683275-5686115[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 3.3 6.1e+03 -1.7 0.0 13 43 251 286 248 289 0.66 2 5 7.5e-11 1.4e-07 32.4 0.2 1 45 295 341 295 342 0.95 3 5 2.7e-10 5.2e-07 30.6 0.1 4 44 353 397 352 399 0.97 4 5 6.3e-12 1.2e-08 35.8 0.0 1 46 405 451 405 451 0.95 5 5 2.6e-14 4.8e-11 43.5 0.2 1 41 455 495 455 500 0.96
Sequence Information
- Coding Sequence
- ATGAGTGATTTAGAGGACGAGGATGTAATACTCGACGACATAAAAGCTCTCCAAGAAGTTCTTACGAAAAAACAATCGCACGGTTTGAAAAAGGAGTTGGTTTCCGAAGATCCATTTAGAACAGAACACAGTCAATGCGAGCCGTCGACGTCTCAAGCGAACAATCCTCTATCCCCGTCGAGCACGATTCAGGACTGCTGCACTGTCGACCCACTTGTCGATGGCGAAGAAAGTGATAACGAATGGAACGAGAATATCAATAGCAGTTTGGATCTTTCGAGTCCCGAGGCTGCGTTGAAtctaaatagaaaaataataaatctctTGGTGAATGCTCAAAGAAAGCTTCGCCTCCTGCTCAAAGAGTGTCAGCGTAAACAAGTGCTAATAGATGAAAAACTTCAAAAGATAAATTCCAACCCATTTTCTAGAACGCTATTAACCATTAGCGGGATCCCATATTTCAAAGACAAGCGTCATTTTCCCGCACCCAAGAACCAGGACGCTAAGTTGAAAGCCAATCGTGGTGAGCTACAGATCATTGAACTTCCGTGCCCTTTGCGATGGACTCTGAAAGATCGGAACACGCTATGGGAGGCTATTTTTTGCGAGGCTAAGATGATTGCCCAACAAGTAGCAAGAAAACAACAACCTAATAACGGGCAACACTTGAGCTATGCAGAGGATCCTCTGAACCTGGAATTTAAGCTGACGGCTAAGAGAATACCGGAGCAGATAGCTCAGACCTTCAAGAACTTGGTTGGTCCGATAGGATCGAGGGAATTTGACTGGTTGAAAATAGCAGTGACCGATTTCAATGAAAGACATTCCGCCAGCGAGTGCAGAGCAATGTGGAACGTTTTCCTACATCCTGACATCAACAAGAGTAAATGGAAGAAGGCTGAGGATATGGATCTAAAAAAGTTGGCTGAGAATTACAACTTTCAAAACTGGGACCTAGTGGCTGAAAAATTGGGCACAAACCGTACAGGATATCAATGTTTTATTAGATTCAATACCAATTTTAGAAACAACATGTTGAACAGGAACAGTTTTTGGTCAAAAGAAGAAGACCAGAAACTTATTGACGCTGTAAATGGATTGAGGACTGGGAATTTTATTCCATGGGGAGAGGTCGCTAAGCTTATGGGACAGAGACGAAAGCAGCAGATATACATGCGCTGGAATTACAGTCTTGCTCCTAATTTGAAAAAGGGTAGATTCACCGAAGAAGAGGACAAGCTCCTACTTGCAGGTGTTAACAAGTTTGGGgctaattttacaaaaatttcggtTTCTCTGCTGCCTCACAGAACTACGGCGCAGTTGAACGATCACTATAGAACACTTCtgcatgagaaaaaaaatgagtggACTTTACAAGATGATACCAAACTGGTAGAtctcgttgaaaaatttggcaaCAATTGGTCCGCTATTTCCAAAGAATTCTCCAACAAGTCTAGAGTCCAAGTTAGACATCGTCATACGTCGATACTCCGATATCTGAGTCGGGGCTTGTCCCTCAGATCCATACCCAGGTGGGGACAAAAGTCTGAAGAAGTTTGCATCGAAGATTCAACGATGACTGGTGAAGAAAGGCTTCAAGAAATAAGTAGGTGTTTGAGAACTCCGTATGAAAAGAATGGAAACGATGGAAAGAGAAGTAATCTATCTGATATTGATATAGAGCTTCAGGATTACTTCAAAGGAATGTATCGAACCACTTCGAAACCTGGAAGAAACAGCAAATTTTATACTGCCGAGGAGCTCAACTATAAAACTCCGAGGCTTCACGTTATGTTGCAACTGCTGAATGCTGATCTTGATATTCCTGATGATTTCGACCAGGAACCACAGTTGACGGAAAAAGATAAGCAGCTGCTGACTTCCTTAGTAAAGTATTCAAGGGATGAAACCCTGGCGTCTGACATGCAACAAAAATTGGTTGAATATACCAGGCAAAAGATGTTTGGATCATCTATGGTGACAGAGTGTGAAGATCGTTTTATACCACCGTTTCCATTTGATGGTAAGAAAATTATCTCACGAATTAAAAAAGGAACAGTTACCGGAATAAATTACGATCCTACGAACGAGCCAACCACTGTTGAACTAGATAAAAACTTCAAAACACCTGAGCTAGTCATATCGCAAATGGGCGGTTTGCAAAGCGAACTTGCATTTGAGAAGATGGCCAAGAAATTTATCGGCAAAACCGAAAACTTTCCGACAGATACTGTGTTTTCAAAGGAGATACCTGAACGATCCGGTAAACTATTGccgataaaattcatttccctACCAAATAGTGGGAAGTTAAATAGTGCAAGTGAAATTATTGATATGAACGCCCCAAGTACATCAGGTATCGTTTCCAATCCAGATACAAGTGAAACAGAGCACAGTATGCCAGGTATAAATGAGTCATCTTCGAAAATTACCAGAAGGAAACTCACCAAGTATTGGCCAGAAATGCTGATACCTCCAAATTACACAACTTTACTAGGGTTTCGtggaatattattatcaaaacacattcttgaggCAGATAATTTGGTGGAAGACGAATATGATGAACTTGAAGATTATAGGATGACAACAGAGGGTCGACAAGCCTTGGAATTATTTGAGGAACGTTTAGCTAAGCTTTTTAAATTTCCTATAGAATTGTCCGAAGTAGCACCACCTGTATTACACGATATGAGAGAAAAAGATTTGGACAGTGTTGGGAACAATtgtcaaagaagaagaaaaggcaGTAAGGAATGTGGGGGATcggaaacaaaaagaaaagcaaagTTTGCAAAACTCAATGTTGAAGAAATTTCTGAGacatga
- Protein Sequence
- MSDLEDEDVILDDIKALQEVLTKKQSHGLKKELVSEDPFRTEHSQCEPSTSQANNPLSPSSTIQDCCTVDPLVDGEESDNEWNENINSSLDLSSPEAALNLNRKIINLLVNAQRKLRLLLKECQRKQVLIDEKLQKINSNPFSRTLLTISGIPYFKDKRHFPAPKNQDAKLKANRGELQIIELPCPLRWTLKDRNTLWEAIFCEAKMIAQQVARKQQPNNGQHLSYAEDPLNLEFKLTAKRIPEQIAQTFKNLVGPIGSREFDWLKIAVTDFNERHSASECRAMWNVFLHPDINKSKWKKAEDMDLKKLAENYNFQNWDLVAEKLGTNRTGYQCFIRFNTNFRNNMLNRNSFWSKEEDQKLIDAVNGLRTGNFIPWGEVAKLMGQRRKQQIYMRWNYSLAPNLKKGRFTEEEDKLLLAGVNKFGANFTKISVSLLPHRTTAQLNDHYRTLLHEKKNEWTLQDDTKLVDLVEKFGNNWSAISKEFSNKSRVQVRHRHTSILRYLSRGLSLRSIPRWGQKSEEVCIEDSTMTGEERLQEISRCLRTPYEKNGNDGKRSNLSDIDIELQDYFKGMYRTTSKPGRNSKFYTAEELNYKTPRLHVMLQLLNADLDIPDDFDQEPQLTEKDKQLLTSLVKYSRDETLASDMQQKLVEYTRQKMFGSSMVTECEDRFIPPFPFDGKKIISRIKKGTVTGINYDPTNEPTTVELDKNFKTPELVISQMGGLQSELAFEKMAKKFIGKTENFPTDTVFSKEIPERSGKLLPIKFISLPNSGKLNSASEIIDMNAPSTSGIVSNPDTSETEHSMPGINESSSKITRRKLTKYWPEMLIPPNYTTLLGFRGILLSKHILEADNLVEDEYDELEDYRMTTEGRQALELFEERLAKLFKFPIELSEVAPPVLHDMREKDLDSVGNNCQRRRKGSKECGGSETKRKAKFAKLNVEEISET
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01048158;
- 90% Identity
- iTF_01048158;
- 80% Identity
- -