Npin026449.2
Basic Information
- Insect
- Neodiprion pinetum
- Gene Symbol
- kn
- Assembly
- GCA_021155775.2
- Location
- CM037745.1:28932973-28939296[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 8.9e-121 7.5e-117 391.9 13.0 205 563 1 351 1 361 0.76
Sequence Information
- Coding Sequence
- ATGAGGCGATTTCAGGTGATCATCTCGACCCAAATCGGAGTCGAAGGGCCTCTCCTAGCTGTTTCGGACAATATGTTTGTCCACAACAACAGTAAACACGGCCGGAGGGCGAAACGCCTCAACCCGGGCGAGACCGGCGAGTACAACAGCCTTTATCAACCCGTGTCCGTTGCTAGCCCATGCATCAAGGCGATATCGCCCAGCGAAGGATGGACGTCCGGCGGTTCCACCGTCATCATCGTCGGTGACAACTTCTTCGACGGACTGCAGGTCGTCTTCGGGACCATGCTCGTCTGGAGTGAGCTGATCACACCGCACGCCATCAGGGTCCAGACGCCACCACGGCACATACCGGGAGTCGTCGAAGTGACGCTATCTTATAAGAACAAACAACTTTGCAAAGGAGCACCGGGCCGGTTTGTCTACGTTTCACTGAACGAACCAACGATCGACTACGGGTTCCAGAGGTTGCAGAAACTCATCCCCAGGCATCCCGGTGACCCGGAAAAGCTTCCGAAGGAAATAATACTGAAGAGGGCGGCTGACCTGGCAGAAGCTTTGTACAGCATGCCGAGGGGTGGGAACGCGGGCATCACCGGGGCGCCCAGAAGCCCGGGTTCCGGTCATCCTCCGCCACCGCCAACGTCCACCTCCGCCACAGCCTTCAACTCTTATACAGGCCAGCTAGCCGTCACCGTGCAAGAAAACGGTAGCGCTAAATGGACCGACGACGGTGGCTCGGTGACGACGGGAGCCGGGGGAGGTGGCGGCGGCAGCGTCGGGGGCAGTGCGGACGCCTACCGGCAGAGCAGCAGCGTCAGCCCCCGCGGGGGTGGCACTGGCGGTGGCTACTGTGGGAGCAGCGCGAGCACCCCACACAGTCACAGTACCGCCGGAAGCTACTCAGCCGCTACCAACCCCTACACGGTTCCCCTACCCGGAAGTCCGACCCTCTACAACTCCCCGCACGAACAGTACGGCATTTTCTATTCGTCCGGCGACGCCAGCGCTTTCGCCCCGGTCCTGAGACCCCCGACTTCCTCGGTCCCGTCGCACTGGCCCACCCAGCATCACCTCGCTACCGCAGCACAGTAA
- Protein Sequence
- MRRFQVIISTQIGVEGPLLAVSDNMFVHNNSKHGRRAKRLNPGETGEYNSLYQPVSVASPCIKAISPSEGWTSGGSTVIIVGDNFFDGLQVVFGTMLVWSELITPHAIRVQTPPRHIPGVVEVTLSYKNKQLCKGAPGRFVYVSLNEPTIDYGFQRLQKLIPRHPGDPEKLPKEIILKRAADLAEALYSMPRGGNAGITGAPRSPGSGHPPPPPTSTSATAFNSYTGQLAVTVQENGSAKWTDDGGSVTTGAGGGGGGSVGGSADAYRQSSSVSPRGGGTGGGYCGSSASTPHSHSTAGSYSAATNPYTVPLPGSPTLYNSPHEQYGIFYSSGDASAFAPVLRPPTSSVPSHWPTQHHLATAAQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01489186;
- 90% Identity
- iTF_00938452;
- 80% Identity
- -