Npin023653.1
Basic Information
- Insect
- Neodiprion pinetum
- Gene Symbol
- -
- Assembly
- GCA_021155775.2
- Location
- CM037745.1:5566160-5572576[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.6e-14 9.9e-11 42.8 0.0 1 48 15 62 15 75 0.91
Sequence Information
- Coding Sequence
- ATGGCCAAATTCCTCAACAAGGACCCTGTCACCTATCAGCGGGAGCGTGACGGGTTCATCAAGGGACTTCATCATTTTCACGAGACTCGCGGAACACCCTTCAGGAGGCCACCGAAAATCAGCGGGAACGAGATAGACTTGTACTTGTTATACGTGCTGGTTACCGCCCACGGAGGATGGATCAAGCGAGGAGGCGACGTTTCGTGGCGGGGGTCGCCTCGCCGGCAGACGCAAGCAGCGGTCGATACGGCAACGCCGCGCCCCGGCGTCGCATACCGGACGAAGAGGCGGGCGACGCGCAGCGCTCGACTCCTCGAGCAAGCCGTCGGTGAAGTGAGCCGAGGCCGCGCGGACGCGCCGGAAGATTTCGACCCGGCAACACCGCCGACGGCGGCGCGGTTTCTCGGGGAGCGAAGAGAAGCCGACCCGACGGTAGCGAGCCGCCTGCCTGCCCGACTCCGCCAGCTCTTTGCCTCCAGACTCGAAGAGCAACGCGCGCGGCGGTCGGTTCGTCCGACCATAATCCCCGACGCtactctcttctcttctcttctcgtctcttttcttctcttggATATCTCTCTTCTTGGTTTGGAGGAGAAGATGCAGCAGCGGCGACGTCGCCTCTTTCTTCTCTACCTCAAAAACTTACCGACTCtagagaaggagaagaaggagaagaagccTCTGGTGGCTCTGCGCACATAA
- Protein Sequence
- MAKFLNKDPVTYQRERDGFIKGLHHFHETRGTPFRRPPKISGNEIDLYLLYVLVTAHGGWIKRGGDVSWRGSPRRQTQAAVDTATPRPGVAYRTKRRATRSARLLEQAVGEVSRGRADAPEDFDPATPPTAARFLGERREADPTVASRLPARLRQLFASRLEEQRARRSVRPTIIPDATLFSSLLVSFLLLDISLLGLEEKMQQRRRRLFLLYLKNLPTLEKEKKEKKPLVALRT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -