Npin020282.2
Basic Information
- Insect
- Neodiprion pinetum
- Gene Symbol
- Xbp1
- Assembly
- GCA_021155775.2
- Location
- CM037744.1:9392595-9395061[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 2.5e-14 3.1e-11 44.0 13.5 2 64 79 141 79 142 0.95 2 3 1.9e-05 0.024 15.5 1.8 24 56 115 147 114 151 0.94 3 3 2.8 3.5e+03 -1.0 0.3 35 49 202 216 199 224 0.74
Sequence Information
- Coding Sequence
- ATGAGCGTGTTGAAAAGTATCATTATAACTGTGCCTAAGGGTCTGTCAAAGACTCCAGGTTTTTCAAcgcaaaaattaaattttacaacgTCCCTGCTCACCGAGAATAACGCGAATAAGATCAACAATCGGAAAATGTCTACTACCGAGGATGACGCAGCGTTAGACGGTTCCATTATTGAAcaagaaatttgttttcgtgGAAAGAAACGGCGTCTCGATCATCTTACgtgggaagaaaaaattcaacgaaaAAAGTTGAAGAACAGAGTAGCAGCTCAAACATCCCGCGATCGTAAAAGAGCAAAGCTTGATGAGCTTGAAGAAACAGTAAGAGTTCTCAGAGATAGAAACGAAACCCTTGCCCAAGAGTGTTCGGCATTAAAGTCGCAGAATGAGGTGCTTACAGTTGAAAATACTTCACTGAGGAGAGACTTAGAGTCGAGAACAACCACAGGAGAACAGCACTGTTCAAAGTGGTGGGGCAACCGAACTGGCACCAGTTCTGACCCTGACACAACCAGCCGCAACCCTGTGGAGGATTCTGACCCTCTACCTCCTCTCGAAGAATTGTTTGCAGACCTCCAAGGAGACGATTACATCGAGAGACTTGAAGAACTGGCCGAAAGCCTTCTGCGAGAGGTTACCGCCGAAGTGGAAGCAAATGCTAATCAATCAAGTGAACAAGTCAACCTCGCAAGGGATGCCCCCCAAGAATCTAGCGATACAACAAGAGTGGTGGGGCAGGCATCAGAAAATGTGGAAGCCGATAGAACTGGTCGAAGCATAGATGAAGCCTCTTCCACACCTGTTCAATATTCTGGCCCAAGCACAACTACTACATTTTGTACTCGCACGCATGATGACACTGTCAATCCTACACATTACGAAAATTACGTTAAAGTTAAGGAAGAGCCAAATATAAATGACATGGATACAGTCTACGGTACTTACGACGAATCAACCAATTGCATAACAATTATATATCCAGGAGATGACAAGGATGGTATTGAAATTCAAGAAAGCGTCCAAGAAGTAACATCAGAAGTTATACACCCCGAAAAAGATTCAACATATTTTAGGCCCAGCCATTCGTTTGGTGGTCATTTATCGCCCCCTTACATGTCTGCAGATTCTATGTCTCCAGCAAGTCTTCATTCTGATGATATAGACATGGGGGAACCCTTAAACAAATTAGATCCAAATTTATCAGACGGGGGATATGAGTCTCATGGATCTCCAAATACAGAAACAATTAATTCCAATACTACGGCAGCCCTCACAGACCTCTGGCACGAAAGCTTTTCCGAATTATTTCCAAGTTTAGCATGA
- Protein Sequence
- MSVLKSIIITVPKGLSKTPGFSTQKLNFTTSLLTENNANKINNRKMSTTEDDAALDGSIIEQEICFRGKKRRLDHLTWEEKIQRKKLKNRVAAQTSRDRKRAKLDELEETVRVLRDRNETLAQECSALKSQNEVLTVENTSLRRDLESRTTTGEQHCSKWWGNRTGTSSDPDTTSRNPVEDSDPLPPLEELFADLQGDDYIERLEELAESLLREVTAEVEANANQSSEQVNLARDAPQESSDTTRVVGQASENVEADRTGRSIDEASSTPVQYSGPSTTTTFCTRTHDDTVNPTHYENYVKVKEEPNINDMDTVYGTYDESTNCITIIYPGDDKDGIEIQESVQEVTSEVIHPEKDSTYFRPSHSFGGHLSPPYMSADSMSPASLHSDDIDMGEPLNKLDPNLSDGGYESHGSPNTETINSNTTAALTDLWHESFSELFPSLA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -