Nlec000079.1
Basic Information
- Insect
- Neodiprion lecontei
- Gene Symbol
- Xbp1
- Assembly
- GCA_001263575.1
- Location
- NW:12463-15623[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.4e-14 6.1e-12 44.6 13.8 2 64 79 141 79 142 0.95 2 2 1.2e-05 0.0053 16.0 2.1 24 56 115 147 114 152 0.93
Sequence Information
- Coding Sequence
- ATGAGCGTGTTGAAAAGTATCATTATAACTGTGCCTAAGGGTCTGTCAAAGACTCCGGGTTTTTCAacgcaaaaattaaattttacaacgtcCCTGCTCACCGAGAATAACGCGAATAAGATCAACAATCGGAAAATGTCTACTACCGAGGATGACGCAGCGTTAGACGGTTCCATTATTGAacaagaaatttgttttcgtgGAAAGAAACGACGTCTCGATCATCTTAcgtgggaagaaaaaattcaacgaaaAAAGTTGAAGAACAGAGTAGCAGCTCAAACATCCCGCGATCGTAAAAGAGCAAAGCTTGATGAGCTTGAAGAAACAGTAAGAGTTCTCAGAGATAGAAACGAAACCCTTGCCCAAGAGTGTTCGGCATTAAAGTCGCAGAATGAGGTGCTTACAGTTGAAAATACTTCACTGAGGAGAGACTTAGAGTCTAGAACAACTACAGGAGAACAGCACTGTTCAAAGTGTCAGAGCAGTGTCAGTTGTGTTGCCCCCATGCAGGGATCTGCAGTATCCCCCAAATACCCTCTGCCGCAGGGTGGGGCAACCGAACTGGCACCAGTTCTGACCCTGACACAACCAGCCGCAACCCTGTGGAGGATTCTGACCCTCTACCTCCTCTCGAAGAATTGTTTGCAGACCTCCAAGGAGACGATTACATCGAGAGACTTGAAGAACTGGCCGAAAGCCTTCTGCGAGAGGTTACCGCCGAAGTGGAAGCAAATGCTAATCAATCAAGTGAACAAGTCAACCTCGCAAGGGATGCCCCCCAAGAATCTAGCGATACAACAAGAGTGGTGGGGCAGGCATCAGAAAATGTGGAAGCCGATAGAACTGGTCGAAGCATAG
- Protein Sequence
- MSVLKSIIITVPKGLSKTPGFSTQKLNFTTSLLTENNANKINNRKMSTTEDDAALDGSIIEQEICFRGKKRRLDHLTWEEKIQRKKLKNRVAAQTSRDRKRAKLDELEETVRVLRDRNETLAQECSALKSQNEVLTVENTSLRRDLESRTTTGEQHCSKCQSSVSCVAPMQGSAVSPKYPLPQGGATELAPVLTLTQPAATLWRILTLYLLSKNCLQTSKETITSRDLKNWPKAFCERLPPKWKQMLINQVNKSTSQGMPPKNLAIQQEWWGRHQKMWKPIELVEA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00719127;
- 90% Identity
- -
- 80% Identity
- -