Basic Information

Gene Symbol
Xbp1
Assembly
GCA_001263575.1
Location
NW:12463-15623[+]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.4e-14 6.1e-12 44.6 13.8 2 64 79 141 79 142 0.95
2 2 1.2e-05 0.0053 16.0 2.1 24 56 115 147 114 152 0.93

Sequence Information

Coding Sequence
ATGAGCGTGTTGAAAAGTATCATTATAACTGTGCCTAAGGGTCTGTCAAAGACTCCGGGTTTTTCAacgcaaaaattaaattttacaacgtcCCTGCTCACCGAGAATAACGCGAATAAGATCAACAATCGGAAAATGTCTACTACCGAGGATGACGCAGCGTTAGACGGTTCCATTATTGAacaagaaatttgttttcgtgGAAAGAAACGACGTCTCGATCATCTTAcgtgggaagaaaaaattcaacgaaaAAAGTTGAAGAACAGAGTAGCAGCTCAAACATCCCGCGATCGTAAAAGAGCAAAGCTTGATGAGCTTGAAGAAACAGTAAGAGTTCTCAGAGATAGAAACGAAACCCTTGCCCAAGAGTGTTCGGCATTAAAGTCGCAGAATGAGGTGCTTACAGTTGAAAATACTTCACTGAGGAGAGACTTAGAGTCTAGAACAACTACAGGAGAACAGCACTGTTCAAAGTGTCAGAGCAGTGTCAGTTGTGTTGCCCCCATGCAGGGATCTGCAGTATCCCCCAAATACCCTCTGCCGCAGGGTGGGGCAACCGAACTGGCACCAGTTCTGACCCTGACACAACCAGCCGCAACCCTGTGGAGGATTCTGACCCTCTACCTCCTCTCGAAGAATTGTTTGCAGACCTCCAAGGAGACGATTACATCGAGAGACTTGAAGAACTGGCCGAAAGCCTTCTGCGAGAGGTTACCGCCGAAGTGGAAGCAAATGCTAATCAATCAAGTGAACAAGTCAACCTCGCAAGGGATGCCCCCCAAGAATCTAGCGATACAACAAGAGTGGTGGGGCAGGCATCAGAAAATGTGGAAGCCGATAGAACTGGTCGAAGCATAG
Protein Sequence
MSVLKSIIITVPKGLSKTPGFSTQKLNFTTSLLTENNANKINNRKMSTTEDDAALDGSIIEQEICFRGKKRRLDHLTWEEKIQRKKLKNRVAAQTSRDRKRAKLDELEETVRVLRDRNETLAQECSALKSQNEVLTVENTSLRRDLESRTTTGEQHCSKCQSSVSCVAPMQGSAVSPKYPLPQGGATELAPVLTLTQPAATLWRILTLYLLSKNCLQTSKETITSRDLKNWPKAFCERLPPKWKQMLINQVNKSTSQGMPPKNLAIQQEWWGRHQKMWKPIELVEA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00719127;
90% Identity
-
80% Identity
-