Ntra001813.1
Basic Information
- Insect
- Neocrepidodera transversa
- Gene Symbol
- gata5-b_3
- Assembly
- GCA_963243735.1
- Location
- CAUJLB010000126.1:149209-161027[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.4e-18 8.1e-15 55.6 4.8 1 35 18 51 18 52 0.97 2 2 2.2 1.3e+04 -2.6 0.1 9 20 177 189 174 190 0.71
Sequence Information
- Coding Sequence
- atgattgcaAGAACTTATATCATAAAGTCCTCTCGTCAAGCGGGTTTGACCTGCACCAACTGTCATACTAGTACTACATCTCTTTGGAGGAGAAACgctttaggagaaccaatttgcAACGCTTGTGGACTTTACTACAAATTACATTCCGTCAATAGACCTCTTTCGATGAAGAAAGATAGTATTCAGACAAGAAAACGAAAACCAAAAGGAAGTAAAGAGTCGAACGCAAGTAGTACCCACATTCCAAGGAATCTCACCAATACATCACTTTCCTCAATTAAAATGGAAGACGTTAAATTAGAACATACAAGTTTAGATAATTATAGCGATCTTAGAACTGTAACATCTCTGAATCAACTTCAACATGCCACGTCGACGAGTTACGCTTACACTACTCAAGCACATCAAAGATTAAGTCCAACATATCCATCTCAATCGCCTCAACTTAGCACGCAGTCTCATTACTACGAGTCGATTCTTCAACAGCCAAGTCCCAGTCCAAATTCTAACGAGTCGGATTCTGAAACTGCTCCtcttcttaataataataacaataataataatactaaagtTATTATTAATGGTGATCATTGCGTTGATAGACCTACCGTGGTATCGCTTTCTTCGTAA
- Protein Sequence
- MIARTYIIKSSRQAGLTCTNCHTSTTSLWRRNALGEPICNACGLYYKLHSVNRPLSMKKDSIQTRKRKPKGSKESNASSTHIPRNLTNTSLSSIKMEDVKLEHTSLDNYSDLRTVTSLNQLQHATSTSYAYTTQAHQRLSPTYPSQSPQLSTQSHYYESILQQPSPSPNSNESDSETAPLLNNNNNNNNTKVIINGDHCVDRPTVVSLSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -