Basic Information

Insect: Neocrepidodera transversa
Gene Symbol: zld
Assembly: GCA_963243735.1
Location: OY725342.1:15816474-15819278[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 0.00027 0.045 15.7 0.4 1 23 18 40 18 40 0.97

2 7 0.00011 0.018 16.9 0.4 2 23 222 244 221 244 0.97

3 7 0.0027 0.46 12.5 2.9 1 23 445 469 445 469 0.92

4 7 0.0085 1.4 11.0 6.8 1 23 815 838 815 838 0.97

5 7 0.05 8.4 8.5 4.7 1 23 844 866 844 866 0.96

6 7 0.00014 0.024 16.6 8.0 1 23 872 894 872 894 0.97

7 7 0.00069 0.12 14.4 3.4 1 23 900 922 900 922 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	0.00027	0.045	15.7	0.4	1	23	18	40	18	40	0.97
2	7	0.00011	0.018	16.9	0.4	2	23	222	244	221	244	0.97
3	7	0.0027	0.46	12.5	2.9	1	23	445	469	445	469	0.92
4	7	0.0085	1.4	11.0	6.8	1	23	815	838	815	838	0.97
5	7	0.05	8.4	8.5	4.7	1	23	844	866	844	866	0.96
6	7	0.00014	0.024	16.6	8.0	1	23	872	894	872	894	0.97
7	7	0.00069	0.12	14.4	3.4	1	23	900	922	900	922	0.93

Sequence Information

Coding Sequence: ATGGCTAGTAATAGTGGCGTTCAGCAGTATATGCAACAAACGAACAGTCCTTATCACTGCAAGGAATGTGGTATTTCTCTAAATTCAGCCGAATCGTTAGAAGTTCATCTGCAGTACCACAAGGAAAATTTGCTGAAACATTGGGCGATACAAGCTGCTTCATCGCATTCAGAAGAAACGAACAACAATACTACCAAGGCGAACATTAAACGTGAGTTGATTTCAAATAATACTGTAGCTGCTGCTGATAGTTCTGATTCAATGCAAAAAAAGAGTCCAGAATATAGCAGGGCTACTCCTGAAACAGTTTTTGGCCATCCTCCTACACCCCAAAGCTATCAAAGCGCTTCATCCCCATATCAAAATCAAGATAATTCTACTTTTTCACCAAACTTTCAAACTTATCAAATTAAAACAGAACGACATTCACCCACTCCCCAATATCAAAACAATTATTCCAATTATTCTgaccaacaatatttttctatggAATCTAATCAAGGACAATTTAATCAAGAGTCATTTGTCCACAAATCTTCCGCTTACAGGTATCATCCTTATAACCAGTCACAAAACAGCCCTTACGAGCGTCAATCGCAGGCACAGGTGTCATCGTCAAGCCCTGCGTACCCTCCGCAACCGACCCCATCCCCTAGTCCTAAACAATGCGACAAGTGTGGTTACGTGTGCGAGTCGGCCTCACAATTAATAGAGCACCTTAACATGGCTCACCCTTCGACCCCTGCTTCGCATCTTGTATCATATCAACCCAATCAACATTTCATGTTCGATCAGCAACATCCTGTTATTAAACAGGAAGATCCAGCACAAAGCGAAATTTTAGATCTTGATTCACATAAAGTAGTCCATAATGTTTTTCCTGAAGATGAAAAACGTCAAAACGGGGATCCTAATCCACATTCTGTATCAGCTATGCTGAATTCTTGGCCACCTACGCAACAACAAAATGCACAACAAAAAATGTTTGCGCAACAAGATCAAAGAATGTTTACGAATCCCgaccaaaaaatatttccacAAAACATTCCAGATAACATTCCAgaaacaaaaatgtttcaatcagaacaaaaaatattccaacCTCATCAAATTCATAATCCAGAATTTATGAGTAACGGGGTTACAACTACCACACAAGACAATGGCATTGGACAAGCACCTCAATCTTACAGACCGTTTGAACATATGACGTCGCCTCCAAGCGCATCTGTCATTTCGAGCACACAAGTTCCTACAAATCCGGTCGCTCCTCCTGCACCTACAGGCAAAGGCGCCAACTGGAAATCTAACGAGGCTAGGAGGCCTAAAACTTACAATTGTACTGCTTGCAACAAGTGGTTTACCAGTTCAGGACATTTAAAACGACACTATAATACAACTTTACATAAAAATGCAGTAAAATCTAGCGGACAGCCAGATCCGGCAGGTCTACCAATAAGTGCTCATCATCACCCGGCTAGAGATAATTCGTCAAAACAAGATGATCGTCCACAATCGGGAAGTTCCGGAGATGAAGTGCGCAGCGATGATAATAACAGCATGCCTCAATACGATAGACTCAGTTCCATGCAAGGTTTAAGTGGTCCCTACGAAAGACAACCTCCTCCACCTACAATTCACCATACTCCTCCTCTCCATTCTCCCATGCCACACTCCCCTATGCCTCAACATCCTAGTCCTTTAGGAAATCCGAACATGTCTAACGGAAGTCCCCCAAACGGGGAAGCAGGCCTCTCAACCACCAACCTAGATTCGAGGGGCCTGCTGTCTCTGAGTTCCCCCCCAATCAGTACGGGCAGTACCCCCCATGGGTACAATATGCCGCCCCAGCATATGATGTCAATGGAGAACAGCCAATTTCAGATGTACCCAAACGAGTTGGCCCCCCACGTTACGCAGGCTATGGCTATCAACAACCTCAGTACTACTGGTGAATACCAGTACGTGCAGCAGCGCATAGCTGAAGATAATCAACCACTGCCGAGTTTTGCGCAAATCCAAGCGCATCGATTCAACATTCTTGGTTATGATGTAGCGAACGTGGGGGGCAGGGGGTCGGTAACGGCCCCGTATAGTTATTTTGCCGATTCAGACGTTCCAGAAATGAGGACTGTGTATCGCACAGAGAACGAATACAAGTTGACCGTACTTACAGCAGTTGAACCACCGCCTTCTTCTGAGGAATATATACTTGGATATTCTCCATCTGATCACCACCACCATGAAGAAGATCTTAGCATGATTTCTATGACTTCTGAAAATGAAACTAAGATTATGGAGGAGACTAAAATGCAAATTATGGAGGATATTCAGTTGAGATTAGAAGCGCAGCCAAAATCGCCTGAAAAGGCTCATATAAAGAGAGATTATGAAGAAAATACAGGTATACCATTGATAACTTCGACGAGTAAACCTGGATTACATAAATGCTACGATTGTGATAAGATTTTCAATAAAGCCTGCTATCTTACTCAACACAATAAGACATTCCACAGTGGAGATAAACCGTTCAAATGTACGAGGTGTGGTAAAAGGTTTTCTTGTGAGGTGACGTACCAAGAGCACCTTTCGAAGCACGCTGGTGAGAAGCCCCACAAATGTGATCTCTGTCCGAAGCAATTCAACCACAAGACCGATCTGAGGAGGCACATGTGCCTGCACACCGGCCAAAAGCCTTACGCCTGCGACACTTGCGGCAAAGGCTTCATCAGGAAAGATCACATGATGAAACATTGCGAAACACACACGAGGAAGACACAGTCCAAGGGAACGACGATTCGTTGA
Protein Sequence: MASNSGVQQYMQQTNSPYHCKECGISLNSAESLEVHLQYHKENLLKHWAIQAASSHSEETNNNTTKANIKRELISNNTVAAADSSDSMQKKSPEYSRATPETVFGHPPTPQSYQSASSPYQNQDNSTFSPNFQTYQIKTERHSPTPQYQNNYSNYSDQQYFSMESNQGQFNQESFVHKSSAYRYHPYNQSQNSPYERQSQAQVSSSSPAYPPQPTPSPSPKQCDKCGYVCESASQLIEHLNMAHPSTPASHLVSYQPNQHFMFDQQHPVIKQEDPAQSEILDLDSHKVVHNVFPEDEKRQNGDPNPHSVSAMLNSWPPTQQQNAQQKMFAQQDQRMFTNPDQKIFPQNIPDNIPETKMFQSEQKIFQPHQIHNPEFMSNGVTTTTQDNGIGQAPQSYRPFEHMTSPPSASVISSTQVPTNPVAPPAPTGKGANWKSNEARRPKTYNCTACNKWFTSSGHLKRHYNTTLHKNAVKSSGQPDPAGLPISAHHHPARDNSSKQDDRPQSGSSGDEVRSDDNNSMPQYDRLSSMQGLSGPYERQPPPPTIHHTPPLHSPMPHSPMPQHPSPLGNPNMSNGSPPNGEAGLSTTNLDSRGLLSLSSPPISTGSTPHGYNMPPQHMMSMENSQFQMYPNELAPHVTQAMAINNLSTTGEYQYVQQRIAEDNQPLPSFAQIQAHRFNILGYDVANVGGRGSVTAPYSYFADSDVPEMRTVYRTENEYKLTVLTAVEPPPSSEEYILGYSPSDHHHHEEDLSMISMTSENETKIMEETKMQIMEDIQLRLEAQPKSPEKAHIKRDYEENTGIPLITSTSKPGLHKCYDCDKIFNKACYLTQHNKTFHSGDKPFKCTRCGKRFSCEVTYQEHLSKHAGEKPHKCDLCPKQFNHKTDLRRHMCLHTGQKPYACDTCGKGFIRKDHMMKHCETHTRKTQSKGTTIR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00387594;
90% Identity: iTF_00792526;
80% Identity: -