Ntra028422.1
Basic Information
- Insect
- Neocrepidodera transversa
- Gene Symbol
- CSRNP3
- Assembly
- GCA_963243735.1
- Location
- OY725346.1:620440-634054[-]
Transcription Factor Domain
- TF Family
- CSRNP_N
- Domain
- CSRNP_N domain
- PFAM
- PF16019
- TF Group
- Unclassified Structure
- Description
- This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.43 2.2e+04 -3.5 6.8 60 110 17 62 2 88 0.43 2 2 4.6e-104 2.4e-99 333.2 8.8 1 218 189 397 189 397 0.92
Sequence Information
- Coding Sequence
- ATGTCTAATAAATCATCGGAACTTACCAACGACCAACATCAACCATCCAATGACCATAACCAGCATTCTAAGGATGAAGAATGTCAAAGTATCCATAATTCGATTATTAAGAATCAAGATGAATCGGAAGTGGTAAAACCATCTTCTGGAGATCAgaACATGGATGATAATCAAGTATcttcaaaaacaaaagacaatttaaaatcaaatgaaaaagcAATAATACTTTCAAAAAACGAAGATGGAGAAGATTCAGCAACGGAGAGTCTTCCACCGACAGAAGAACCTCACGATAGATCAGATGGTTCAGATTCCGGTTTAGGTTCGGAATTGAGCGAAGAGAGACGCCAAGAAACAGCTACGAATATAGAAAGCGATAGCGAATCTTcatttttatacaatacaatTACAAATACTCAATTCGAAGATTTCGCTAAACAAGTGGAATTTCCTCAAACTTCTGGTACAGAAACGGTTCTGAGCGATGCacaatcaaaaatgaaaagttcAAAAAGCAGTTTAAAGCGTAAAGTTGATAGCGATGAAAATGAGGAACCGAAAAGTAAGAAACGGAAAGGAATTACTTTTGATAGTGTTACGGTGTTTTATTTTCCAAGAGCACAAGGGTTTACTTGTGTACCTTCACAAGGAGGATCTACATTGGGTATGGGACCTCAGCACTCTCatgttaagaaattttcaatagcaGAACATGCTGTGGAACAACGAAGAATCCACAGGCAACTATTACAACAATTAAGATCAGAAAGATCAGTAACAAGcggTACAACAACTTCTAGCGAAGAAAGCGACAGCGAAGACGAAGCGAGCGAAGCCAGCGACACGGAAATGGATCCCGATAATTATTATTTCCTGCAACCGGTTCCGACGCGGCAGCGACGCGCGCTTCTACGCGCTGCAGGAGTGCGAAAAATAGACGCTCTAGAAAAAGACGAATGTAGAAATATTCGGACGTCGCGTGAATTTTGCGGGTGCGGGTGTAAAGGATATTGTGATCCGGACACGTGCTCGTGCAGTCAAGCCGGCATCAAATGTCAAGTTGACAGGTTGAATTTTCCCTGTGGTTGTTCGAGAGATAATTGCGGTAATTCTAGCGGGAGAATTGAGTTTAATCCGGTTAGAGTTCGGACGCATTTTATACATACACTTATGAGGTTAGAATTGGAAAaggaaaaggaggaaaaatcCGAAAACAAAGAAGTCGGCGGCCCAAATTGGATGAACAACGAGAGATTAACGGCTCCTATGGACCAACAACAATCAACatctaaatcaacaataaacAAATACAATAGTAATTTGTTACGCGATGTTACGTTATCGGCTAACGTTGAAGCTGAAAATTGCGTTCATACGGGAAGTTTTACGAATTTGCATTATGGAGCACCCGGAGAAGGACCTGGATTACAATTATTAGAtagggCGGACTCTTTGGATCTCTACACTTTTAGGGAAAATTGTTATGTAGAAGAAACTGGCCAGGAAGAAAGGAAACAGCAagcttttcatttttctaatgttGGTTTTGCAAGCTATGCGACTGGACACCAAAATCACTATAGTCAACCTTATTTGGAAAAAAGTCAagtgtaCCCGACCACTTTTACCGAGTTCCCTCCAATATTCAACCCCTATGGAGGAATGTACGTGCCCGAATTCTCCCAAAAACCAATAGAAGGAAGTTTCCATCCACAACCGCCCTAcgaaaactttcccaacgaacATTTTCCGGAATCGAAAGAAAACCAGTACACGAGCCTAAACCCAGTAACATCTAACAATAAAATCGAATCGTTTTCGGAATTACTGAGCGGAAGGTACGCGGGTTATCCGACTTATGAAGGCGAATTTAATAGTTTGAATGAATGTTCGCAAAATGCTGTTGAAAAAAGTAGTGAAACTTCGACTAATTCGGAGGAGGGCGATGAAAATTTTGGGGAGATTATTAAAAAGTCTATGGTAGAAACAGTTTCTGcgtaa
- Protein Sequence
- MSNKSSELTNDQHQPSNDHNQHSKDEECQSIHNSIIKNQDESEVVKPSSGDQNMDDNQVSSKTKDNLKSNEKAIILSKNEDGEDSATESLPPTEEPHDRSDGSDSGLGSELSEERRQETATNIESDSESSFLYNTITNTQFEDFAKQVEFPQTSGTETVLSDAQSKMKSSKSSLKRKVDSDENEEPKSKKRKGITFDSVTVFYFPRAQGFTCVPSQGGSTLGMGPQHSHVKKFSIAEHAVEQRRIHRQLLQQLRSERSVTSGTTTSSEESDSEDEASEASDTEMDPDNYYFLQPVPTRQRRALLRAAGVRKIDALEKDECRNIRTSREFCGCGCKGYCDPDTCSCSQAGIKCQVDRLNFPCGCSRDNCGNSSGRIEFNPVRVRTHFIHTLMRLELEKEKEEKSENKEVGGPNWMNNERLTAPMDQQQSTSKSTINKYNSNLLRDVTLSANVEAENCVHTGSFTNLHYGAPGEGPGLQLLDRADSLDLYTFRENCYVEETGQEERKQQAFHFSNVGFASYATGHQNHYSQPYLEKSQVYPTTFTEFPPIFNPYGGMYVPEFSQKPIEGSFHPQPPYENFPNEHFPESKENQYTSLNPVTSNNKIESFSELLSGRYAGYPTYEGEFNSLNECSQNAVEKSSETSTNSEEGDENFGEIIKKSMVETVSA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00387236;
- 90% Identity
- -
- 80% Identity
- -