Ntra027339.2
Basic Information
- Insect
- Neocrepidodera transversa
- Gene Symbol
- CAMTA1
- Assembly
- GCA_963243735.1
- Location
- OY725345.1:12810911-12854542[+]
Transcription Factor Domain
- TF Family
- CG-1
- Domain
- CG-1 domain
- PFAM
- PF03859
- TF Group
- Unclassified Structure
- Description
- CG-1 domains are highly conserved domains of about 130 amino-acid residues containing a predicted bipartite NLS and named after a partial cDNA clone isolated from parsley encoding a sequence-specific DNA-binding protein [2]. CG-1 domains are associated with CAMTA proteins (for CAlModulin -binding Transcription Activator) that are transcription factors containing a calmodulin -binding domain and ankyrins (ANK) motifs [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.7e-35 9.6e-31 107.4 1.5 40 116 2 76 1 76 0.97 2 2 0.43 1.1e+04 -2.4 3.5 13 87 1202 1282 1195 1341 0.69
Sequence Information
- Coding Sequence
- ATGTTATTATACAGCAGAAAGAAAGTTCGATACCGCAGAGATGGATATtgctggaaaaaaagaaaagacggAAAAACAACAAGAGAAGATCACATGAAGCTAAAAGTTCAAGGAACAGaatgtatttATGGTTGCTACGTCCACTCAGCGATTCTACCAACGTTCCATCGAAGATGTTATTGGCTGCttcagaatccTGACATCGTTCTGGTCCACTACTTGAATGTTCCTTATCCAGACGACAACAAACTGGCCGTCATAACCCCGAGTCTGGCCCTTTGGGCAGACAAAAAAGAATGGACGAAAGAAGAACTAGTCTCGCAATTAAAACCGATGTTTTTCAGCGAAGATGAGCCGGACATTAACAACGAATTAGAAATATCGaattttaaaCTACAGACCGCCGAAACGGTGGAAGCTATAGTGAGTCAATTAATGGAAAAACAGCGAGTGGCTAGACAAGCAGCTTTGGTGAAACAATTAGAATGTGGTTGTCCAGATTCGACTTGTGCAGACGGGAAAAGTTGTTCACATCCTATGAGAAGGATAACGGCAGCCAAAGAGATAGCTTCGCCTTTACCCAGCTCCAGCTCGAATTCAAGACCACCCAGTAACTCGGATAACAATAATCAAGTTTCTTCCACTACAGGATCAGGATCTATGTTGTTAGGAAATGGAAATTCGCCTAGAGTTTATTCTAGGGATTCTAGGAATCCACAGGTTCCTCAGAATAACACCAACTGTTCCTCAAGCTCGGCTAATACGCCTCCTTTAGTTTTGAGTTTGTCTCAGATTCAAGGCGGTGGTGGGTTATTGATTTTGAATAGTAATTCTGGTAATAACGGTAGCAACGCTCATAATCTAGTCAATCCTGTGTCAGTAGCTAACTTTGTTTGCAATACAAATCGTGTGATTCCCAAAGAAAGAGCTAGTCATTTGGTATTAAAGCAGGAGATAATGGACACAAATCCCGCATCTTGCTTGCATTCCTCAAAACAAAACTCCAAATCGGGGCAGAGAGAAATGAAAATGGAGCTCAGCGAGAACCATAGACAATCAGTTTTTCACGATAATTCCATTTATAATAATAGaaaCCACCATCAACAAACCGAGGTGATTATGTCCAGCGCTCCATCAACTCCTTCCAAACACATGGATACAACTCCTCAAGAAGAAGTTGTCAATGACTATAAACATCAGAATTTTTGCAGCGAAACTGTAGTACTCTTAGGAACGGATTCTAGTGGATCGTTAGTTAGCAAAAGCGACGGTTCTTCCATTATAAACGGAGGGTTCTTTAACGAAACTTTAGATTTGTCACAGGAAGATATTCAAAGAACCTTGTCGGCCAACATGCCTTTGTGTTCAACAGAACTAAATAATCAAAATCGCACTCCGGAAACGAATACCAccaatcatcatcatcatcaccATCATCAACACCATCATCACCAAACTAAAACTCAGCAACAGCCGCAGACGCTTACCACCGAAATCAATCCGATGGACTTTATCGATAGCTGCGACGTTGTCGTTTCTCCGACTCACGTCGTCGATGACGACGTCTTCGTCAATTTGGACGCGTTCGATATGTTGGGCGAGTTTCCAGATTTAGAAAGCTTGGATTCTGGTCATGCCGGACTCCTAGATGTTAATCCGTCCGAAACTAGAAATACTACGAAGGCACAACCAGAACACCAACAGAGCAATCATCCATTGGAAGGGTCCGCCAAGATTACGGATTATTCGCCGGAATGGGCTTATCCGGAGGGAGGAGTGAAGGTACTTGTCACTGGACCTTGGCATTCCTCCGGACCTTATACCGTACTTTTTGATACATTCCCTGTACCCACCACTCTTGTACAAAGCGGTGTGTTACGGTGTTATTGTCCAGcTCATGAAGCTGGTTTAGCAACCCTGCAAGTAGCATGCGATGGTTATGTGATTTCGAACTCTGTGATATTCGAGTACAAGTTACCACCTAGGGAAGAACAAGTAGCCGCGCCGGAACCCAAAGTAGAACGATGTAACGATAATCTACTCAAGTTTACGCTCCTCCAAAGACTCGAGGCCATGGATGATCGGCTCCAGATCAAACAAGAGCCGGTAGATAACGACGTGgtGGAGGATACGGCTCTTTTTGGCCAGACGAATTTTGAAGATCGTTTGGTgagtttttgtcaaaatatgACATCGAGGATATGGAGACACGGTGAAGAACTTAGCGTTTCTTGGTTTGCTAGTCACAGGGGAATGACTCTTTTGCATTTAGCAGCTTCCTTGGGTTATTCTCGTTTAGTGTGCGCCATGTTGCATTGGCGTGCGGAAAATTCTTCTTTGCTGCTTGAAACTGAAGTAGATGCTCTTAGTCAAGACGAGGATGGATTTACTCCTTTAatgtGGGCTTGCTCTAGAGGTCATACAGAGACATCTGTGATGCTTTATAAGTGGAACCATAATGCACTCTACATGAAGAATACTTCGAATCAGACAGCTTTGGATTGCGCTAGGTGTAATAATCATATGGATTTGcttaaagaaattgaaaaattggaattgAGAAGAGATAAAGCTAATATGATGTTACAATCTAATCAGTCTTTATCTGAAGCTGCTTTGTCTCCAGCTAGTTCGATTGGATCTTTGATTTCGATCGCTTCTACCAGCAAATCTCACGATGGAGTTTTTTTAAGACCAGGGGCAGTTACTAGGAGCGAAGTTAACAAGTACAAGATCTTAAACGTTGATTTGGACTCCGATTCTAACAATAAATTGATAACATCAGCTCCAAGTCCATTATTGTCGGATTTTTCTTCTAGTACCAGAGGTAGCAACggtcaaaaattaatcaaaagacCGTCAATCGACAGCGGAATCAATATGAGTTGCGGTCCAGCTTCAGAGAGTTACAGACCCAAGAGTTCAAAAATGTGGAGTAGCAGGGAAACTCCGAAACTTTCTAAATTTGATAGAAGCATGTCGCTACCTCTGCAGACGTCGTGTTTAAAAGATAATTCTTTCGATAGTGAAAGTTTGGATTGTCATAAAAAGATGGATTTTGCGTTATgcGAGATAGGGAGTGGCCCCCGGAGCAGTAGCCCCCTCATTGACGTAGAAGGCGTTTCGGATGATGAGAACGAGCTCCCCAACAGTACCGTAGgGGAGCAAGATGCTAGAGTTTTAACACTGGCAGAACAAATTATTGCTGCTATGCCTGACAGAATTAAGaacgaGAGCGAAGAAATGATGTTGGACAAAAGTCCATGTGCACCAGACAGTCTACAAGCTACTGATACCTTGTCTGATGTATTTATGGAACCGTTGTTAGATCAATCATCTTCAAGTTTCGAATCGACAGAATTCAATTTCGAATTCTCCGATCATAACTACAGGTACTACGACGTTAGTACCCCTTGCTCTAGTTTGAGTCCGGCATCTTCCAGTTGTTTACAGTCACCTTGCTCCTTCACGCTTGATTCACCATCACCTCCACCGACTACAGCCGACTTCTGCGAGTTTTTCCAAGCCTCAAGCAGTGTATTCGAAAAAGACTTCTCAAATTTAACTTTATCAGATCGTGAACAACGCGAGCTCTACGAGGCTGCTAAAATAATCCAGAAAGCCTACAGGTCCTACAAAGGGCGTCAGCAGCAGGAGCAAAATAAAGAACGCGCGGCTGCTGTGGTCATCCAGAATTATTATAGACGCTACAAGCAGTACGCTTATTACAAGCAGATGACGCACGCTGCGATGGTGATCCAGAACGGTTACAGATCGTACTGCGAACATAAAAGGTTTAAGAAAAGCCAAGAGGCTGCGTTGTGCATTCAAAACTATTACCGAAATTACAAGGAGCAGGGGGGGAGAAATAGTAGAGAGGGAACACCCGTTTCGGCCGGGTtgaagCGTACTTACTCGCAGAGAAGACAGCATCAAGCAGCtagaaaaattcaacaattcaTGAGACAGTCAAAAAATAAATTACAGAGAGAACGAGCAGAAAAAGAGAAGCAGGGGGCCCAGTCAGTGGATGTCCATCAAAAGTCACTGTGTCCAGGGGGCTCTTCCACTTACATCGGCCCAAATAGCAGATCAAATAATACAGACTTCAAAGAAGACTCAAGAAAAGGCAACGACAAGAAGTGA
- Protein Sequence
- MLLYSRKKVRYRRDGYCWKKRKDGKTTREDHMKLKVQGTECIYGCYVHSAILPTFHRRCYWLLQNPDIVLVHYLNVPYPDDNKLAVITPSLALWADKKEWTKEELVSQLKPMFFSEDEPDINNELEISNFKLQTAETVEAIVSQLMEKQRVARQAALVKQLECGCPDSTCADGKSCSHPMRRITAAKEIASPLPSSSSNSRPPSNSDNNNQVSSTTGSGSMLLGNGNSPRVYSRDSRNPQVPQNNTNCSSSSANTPPLVLSLSQIQGGGGLLILNSNSGNNGSNAHNLVNPVSVANFVCNTNRVIPKERASHLVLKQEIMDTNPASCLHSSKQNSKSGQREMKMELSENHRQSVFHDNSIYNNRNHHQQTEVIMSSAPSTPSKHMDTTPQEEVVNDYKHQNFCSETVVLLGTDSSGSLVSKSDGSSIINGGFFNETLDLSQEDIQRTLSANMPLCSTELNNQNRTPETNTTNHHHHHHHQHHHHQTKTQQQPQTLTTEINPMDFIDSCDVVVSPTHVVDDDVFVNLDAFDMLGEFPDLESLDSGHAGLLDVNPSETRNTTKAQPEHQQSNHPLEGSAKITDYSPEWAYPEGGVKVLVTGPWHSSGPYTVLFDTFPVPTTLVQSGVLRCYCPAHEAGLATLQVACDGYVISNSVIFEYKLPPREEQVAAPEPKVERCNDNLLKFTLLQRLEAMDDRLQIKQEPVDNDVVEDTALFGQTNFEDRLVSFCQNMTSRIWRHGEELSVSWFASHRGMTLLHLAASLGYSRLVCAMLHWRAENSSLLLETEVDALSQDEDGFTPLMWACSRGHTETSVMLYKWNHNALYMKNTSNQTALDCARCNNHMDLLKEIEKLELRRDKANMMLQSNQSLSEAALSPASSIGSLISIASTSKSHDGVFLRPGAVTRSEVNKYKILNVDLDSDSNNKLITSAPSPLLSDFSSSTRGSNGQKLIKRPSIDSGINMSCGPASESYRPKSSKMWSSRETPKLSKFDRSMSLPLQTSCLKDNSFDSESLDCHKKMDFALCEIGSGPRSSSPLIDVEGVSDDENELPNSTVGEQDARVLTLAEQIIAAMPDRIKNESEEMMLDKSPCAPDSLQATDTLSDVFMEPLLDQSSSSFESTEFNFEFSDHNYRYYDVSTPCSSLSPASSSCLQSPCSFTLDSPSPPPTTADFCEFFQASSSVFEKDFSNLTLSDREQRELYEAAKIIQKAYRSYKGRQQQEQNKERAAAVVIQNYYRRYKQYAYYKQMTHAAMVIQNGYRSYCEHKRFKKSQEAALCIQNYYRNYKEQGGRNSREGTPVSAGLKRTYSQRRQHQAARKIQQFMRQSKNKLQRERAEKEKQGAQSVDVHQKSLCPGGSSTYIGPNSRSNNTDFKEDSRKGNDKK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01289983;
- 90% Identity
- iTF_01105915;
- 80% Identity
- -