Ntra009350.1
Basic Information
- Insect
- Neocrepidodera transversa
- Gene Symbol
- Cdc5l
- Assembly
- GCA_963243735.1
- Location
- OY725338.1:4537267-4542315[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.6e-16 3.7e-13 50.8 1.5 2 46 9 54 8 54 0.97 2 2 5.6e-12 1.3e-08 36.3 0.1 1 45 60 103 60 104 0.93
Sequence Information
- Coding Sequence
- atgcCTAGAATAATGATAAAAGGTGGTGTTTGGAGAAATACAGAGgatgaAATTCTTAAGGCCGCTGTAATGAAATATGGCAAAAATCAGTGGTCTAGAATAGCCTCGTTGCTTCACAGGAAGTCTGCAAAACAGTGTAAAGCTCGTTGGTTTGAGTGGTTAGATCCTAgcattaaaaaaactgaatggTCCCGAGAGGAAgatgaaaaattattacatttggCAAAACTTATGCCCACTCAATGGAGAACTATTGCTCCTATTATCGGAAGAACTGCTGCACAGTGTCTTGAGCGATACGAATATCTATTgGATCAAGCCCAAAAAAAGGAAGAAGGTGAAGATGCAGTTGATGATCCTAGAAAACTTAAACCTGGTGAAATTGATCCTAATCCTGAAACTAAACCTGCTAGACCTGATCCCAAGGATATGGATGAAGATGAGCTTGAAATGCTCTCGGAAGCTAGAGCTAGATTGGCTAACACACAAGGCAAAAAAGCTAAACGCAaggctCGTGAAAAGCAGTTGGAAGAAGCACGGCGTTTGGCAGCTTTGCAAAAGCGCAGAGAATTAAGAGCAGCTGGCATTGAAGTCACTTCTCGTCGCAAGAAAAAACGCGGGGTTGATTATAACAGCGAGGTTCCGTTCGAAAAACGTCCCGCTATCGGTTTTTATGATACATCAACTGAAGCTTTGGATCCTATGGCAccagatttttccaaaatgagACAACAGCATCTAGATGGAGAGCTAAGAAGTGAACGGGAAGAGagagaACGTAAAAAAGACAAGCAAAAATTGCGACAACGCAAAGAAAACGATATTCCGCAAGCGATGCTTCAAAATCAAGAACCAGCAAAAAAGAGATCTAAGTTAGTGCTGCCAGAACCACAAATTTCAGACCAAGAAATGCACCAGGTCATTAAATTGGGCAAAGCAAGCGAAACTGCCAGAGAAATAGCAACAGAAAGTGGAGTAGAAACTACAGATGCACTTTTGAATGATTACACTTTCACTCCTCAAGCTTCAGCTACACCCAGGACGCCCGCACCTCAAACTGatagaattttacagGAAGCTCAAAATATGATGGCCCTCACTCATGTAGATACACCCCTTAAGGGTGGTTTGAACACTCCTTTACATAATTCGGACTTTAGTGGAGTTTTACCACAGTCACAAACAATTTCTACACCCAACACTGTACTTGCGACTCCGTTTAGATCGTCAAGGAGTGATGGAGGGGGTACTCCGAGAAGTAGCGCGGGATTTATGACCCCCAAAAGTGGAGCTCTAACACCCATAGCAAAAACCAATATGACGCCCTCTATTCGAGACAAGCTTAATATTAATCCAGATGAAGGTTTAGATGTAGGCTGTACACCTGCTGAACACAGGATGTTCCAGGTTTCTATGAAAGACCAGTTAAAGATGGGTCTAAGTGGTTTACCGCAACCCAAAAATGATTATGAAGTGGTGGTTCCTGAAAATGAGGATCAAGAAGAACCTGAACATGCCCAGTCTCAAGCagTAGAAGATCAGGCGGATGTTGATGCAAGAAAACAAGAGGAACTTAAAATCAAAGCTGCCAAGGAACTTGCCTCACGTTCTCTAGTAATACAACGTGATCTACCCAGACCGCAGGACGTCAATTTGACAGTTTTGCGCCCACCGCACGAAAGTTATTCTCTAACTGATCTACAAAAGGCAGAGGAGTTGATCAAATGCGAAATGGTGACTATGTTgcaatttgataatttaaaaaatccagttCCTACTCAAAATAAAAGATCGAACATGGCACAAGCACAGCAATTGGCATTTTTGGACCAACATCCTTATGATTCCTACAGAAAAGAAGATTTAGAAGTAGCGAAAGTGATGTTAAAACGGGAAATGGATACTGTCAAAGGTGGAATGAACCATGGGGAGTTACCCATCGACGTTTATACCCAAGTGTGGGAAGAATGCTTAAGCCAAGTTCTGTACCTTCCCAACCAAACCCGGTACACTCGCGCTAATTTAGCAAGCAAAAAAGATCGATTAGAATCTGCTGAAAAACGGTTAGAACAAAATCGATCTCATATGGCAAAAGAAGCTAAACGTGCCGCTAAAATggagaagaaattgaaaattttaacggGAGGTTATCAGTCCAGAGTACAAGTTCTTATTAAGCAACTACAAGACATGTACGAGAACATTGACCAATCAACTTTAGAACTAAATACGTTTAAGTTCTTGCAGAACCAGGAAAAGAGCGCTTTGCCCAGGAGAATACAgtctctTACTGAAGACGTAAATAGACAAATGGAACGTGAAAAAGTTCTTCAAACAAAATATGCCGAGTACCAAGTTCAAATTAAAGAATTCCAGGAGGAATACTTAAAACAAATGAAGAGTGTTCAGAATGAAAGTTCTAGTATAGCTGAGGAAGTGTCTTCTACTACTAATGGTGAAATAGCGATGGAAGAAAATGAAACAGAAACATTGGAAACAGATCAAGATtaa
- Protein Sequence
- MPRIMIKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWFEWLDPSIKKTEWSREEDEKLLHLAKLMPTQWRTIAPIIGRTAAQCLERYEYLLDQAQKKEEGEDAVDDPRKLKPGEIDPNPETKPARPDPKDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEARRLAALQKRRELRAAGIEVTSRRKKKRGVDYNSEVPFEKRPAIGFYDTSTEALDPMAPDFSKMRQQHLDGELRSEREERERKKDKQKLRQRKENDIPQAMLQNQEPAKKRSKLVLPEPQISDQEMHQVIKLGKASETAREIATESGVETTDALLNDYTFTPQASATPRTPAPQTDRILQEAQNMMALTHVDTPLKGGLNTPLHNSDFSGVLPQSQTISTPNTVLATPFRSSRSDGGGTPRSSAGFMTPKSGALTPIAKTNMTPSIRDKLNINPDEGLDVGCTPAEHRMFQVSMKDQLKMGLSGLPQPKNDYEVVVPENEDQEEPEHAQSQAVEDQADVDARKQEELKIKAAKELASRSLVIQRDLPRPQDVNLTVLRPPHESYSLTDLQKAEELIKCEMVTMLQFDNLKNPVPTQNKRSNMAQAQQLAFLDQHPYDSYRKEDLEVAKVMLKREMDTVKGGMNHGELPIDVYTQVWEECLSQVLYLPNQTRYTRANLASKKDRLESAEKRLEQNRSHMAKEAKRAAKMEKKLKILTGGYQSRVQVLIKQLQDMYENIDQSTLELNTFKFLQNQEKSALPRRIQSLTEDVNRQMEREKVLQTKYAEYQVQIKEFQEEYLKQMKSVQNESSSIAEEVSSTTNGEIAMEENETETLETDQD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01344846;
- 90% Identity
- iTF_00387177; iTF_00792048;
- 80% Identity
- -