Basic Information

Insect: Neocrepidodera transversa
Gene Symbol: clz9_15
Assembly: GCA_963243735.1
Location: OY725355.1:16317235-16319415[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 8.7e-07 0.00021 22.4 0.0 2 39 17 54 16 58 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	8.7e-07	0.00021	22.4	0.0	2	39	17	54	16	58	0.92

Sequence Information

Coding Sequence: ATGGTACGAAACTATATACGGAAATCTCAGAGAGCCAAACAATATACCACGGAGGCCTTAGCACATGCATTAGACGAGGTGAAGTCTGGTACTTCAACGATTTATCGTGCAcataaaaagtataatattcCCAAGACCACTCTGTTTTATCACATGAAGGGGGTTCGAGGCAAAATTAGTAAAACTCAGGGAAGAGCACCCGCGATACCGTTGGAAGATGAAGAAAGGTTAGCAAGTGCCctcaaaataatggaaaaatggggCTTCGGAATTACAAGAAAAGAAGTTTTACGTATTGTATCCGAGTATGTTATCACTAATAATATCAAAACGCCCTTCAAAGACAGTCTCCCTGGGGAGGACTGGTTCTTAAGGTTCAAATCTAGACATCGCTTGAGTATCAAAAAACCCCAGAGTGTTGAATATGCTAGAAAGAAAATGACAGACCCGTTTGTCATCTATGAATATTTTGAGATTCTCGAGAAAGCAATTAAGGACAATGAATTGTCCCTGAAACCACAGTTAATATGGAATCTAGATGAATCGTCCTTTTCACATgatccaaaaaaatcgaaagttgTGGGAGCCCGAGGTCAACCTAGTTCCAGAACAACAAGCGGACCAGGCAGAGAAAACACGACGATTCTTTCTGCTATTTCTGCTTCAGGTCTGAAGGCCCCACCACTCATAGTTTTTAAAGGAAAACACATTTGGGATAGCTGGATAGCTGATGATAGGAATAGTTTCGAGGGGATGGCTTATGCTGCGAGTGCCAAGGGTTGGATGGAggcggatattttttttaactatttccaaAAAACTCTTATTCCAGTACTAGGCCGAGAAAGACCAATTTTACTAATATATGATGGTCATAGTACCCATATAAATGTGAAGTTAGTGGAGTTAGCCCGAGATAATGATATCATAATACTTAAATTACCTCCGCATACCTCACATCTCTTGCAACCACTTGATTTGGCTGTGTTTAAATCTCTTAAAGATGCTTGGGATAGGGAACTTGTCATGTGGCAAAGGCAAAATATTGGTCtgaaaatccccaaaaaaaaattttcagagcTATTGGGCTCAGTATGGAAAAATCTTCATCctgatgtaataaaaaatggtttccGGAAGGCAGGAATTGTGCCAATCAACAAAAATGTTATATCTACTGAATCATTCGATCCAGAATCTTTGAGGAGATGGGAAGATGAAAGAAATAAGCAGAGGTCCGTTGAACCAGTACCATCCACTTCCAATTATCAAGCCAGTATCCACACTATTTCAATCAATAAACAAACCGATATTATTAGCTCTGCTCCCCCAGCTCCTAATATTGCTAACGAGAGAAGTGACAGTACCGTCGAAATTCAACCACAACATTCGTTCGAACAACTGTTATTGAGAACGGTGAAACAAACAACAACACCAGGTTCTTCTAAAAGAAAAAGAGTAGCATATGGTGCGGAGGTCATAACTCACCCTGAAGTTATTCAGAGACTCATTGACGAAGAGAAGGAGAGGCTtacgaaatcaaaaaataaaacgcaaaaacgaccgaagaaaaaaaatgatggaaCCAAGAAAGTGGTTCCTAAGAAAGTatcgaaaaagagaaaaatccgTATAAGTACGAGTAGTGAGTATTCAGACGAATCAGATGATGTGATTTACGCTAACTCCGACGATGACTTAGACCCTGAGATATTTGAAATGGAAGAAGAGGAagtagaagaagaagaaatagaagaagAGAAAGGAGAGAAAGGGGAGAAAGGAAAGGAAGGAGAGAAAGGAGAGGAAGGAGAGAAAGGAGAGGAAGGAGAGAAAGGGGAGGAAGAAGAGGAAGCAGAGGAAGCAGGGAAAGGAGAGGAAGGAGGTGAACAGtatgaagaaaattcaaaaCTGAAGCTCTCCATAGATAAATGGGTTTTGGTGAAGTATAACACCAGAAAATGTGTTAAACATTTTGTTGGGCTAATAACAGAGAAGACAAAGGATAACTTGTGGTGTGTAAAATTTACAAAGTTCAGAGACAACCAGTTCACCTGGCCAGTTGTGGAAGACATCGATACACTCTCTGATGATGAAATAACAACCATACTTCCATCACCATTCGTCAGCAGATGGGGATCAATGAAATTCTCATTCGATTTTTCCGACTtccatctgtaa
Protein Sequence: MVRNYIRKSQRAKQYTTEALAHALDEVKSGTSTIYRAHKKYNIPKTTLFYHMKGVRGKISKTQGRAPAIPLEDEERLASALKIMEKWGFGITRKEVLRIVSEYVITNNIKTPFKDSLPGEDWFLRFKSRHRLSIKKPQSVEYARKKMTDPFVIYEYFEILEKAIKDNELSLKPQLIWNLDESSFSHDPKKSKVVGARGQPSSRTTSGPGRENTTILSAISASGLKAPPLIVFKGKHIWDSWIADDRNSFEGMAYAASAKGWMEADIFFNYFQKTLIPVLGRERPILLIYDGHSTHINVKLVELARDNDIIILKLPPHTSHLLQPLDLAVFKSLKDAWDRELVMWQRQNIGLKIPKKKFSELLGSVWKNLHPDVIKNGFRKAGIVPINKNVISTESFDPESLRRWEDERNKQRSVEPVPSTSNYQASIHTISINKQTDIISSAPPAPNIANERSDSTVEIQPQHSFEQLLLRTVKQTTTPGSSKRKRVAYGAEVITHPEVIQRLIDEEKERLTKSKNKTQKRPKKKNDGTKKVVPKKVSKKRKIRISTSSEYSDESDDVIYANSDDDLDPEIFEMEEEEVEEEEIEEEKGEKGEKGKEGEKGEEGEKGEEGEKGEEEEEAEEAGKGEEGGEQYEENSKLKLSIDKWVLVKYNTRKCVKHFVGLITEKTKDNLWCVKFTKFRDNQFTWPVVEDIDTLSDDEITTILPSPFVSRWGSMKFSFDFSDFHL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01047184; iTF_01047185; iTF_01047186; iTF_01047187; iTF_01047188; iTF_01047189; iTF_01047190; iTF_01047191; iTF_01047192; iTF_01047193; iTF_01047194; iTF_01047195; iTF_01047196; iTF_01047197; iTF_01047198; iTF_01047199;
90% Identity: iTF_01047184; iTF_01047185; iTF_01047186; iTF_01047187; iTF_01047188; iTF_01047189; iTF_01047190; iTF_01047191; iTF_01047192; iTF_01047193; iTF_01047194; iTF_01047195; iTF_01047196; iTF_01047197; iTF_01047198; iTF_01047199;
80% Identity: -