Ntra018379.1
Basic Information
- Insect
- Neocrepidodera transversa
- Gene Symbol
- ARID5B_1
- Assembly
- GCA_963243735.1
- Location
- OY725341.1:24796750-24807028[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.58 5e+03 -0.5 0.0 34 49 11 26 9 52 0.81 2 2 8.3e-27 7.2e-23 82.3 0.0 1 89 116 202 116 202 0.94
Sequence Information
- Coding Sequence
- ATGAAACGCCTTGACGGTGTAGAAGATATTTACCTGAAGTACAAAATTGTGAATGCATTGGGGGGTTTCTACGTTATACATCCCAATACGAGGGTGCTATTCTGTAGAGACACATTTGACTATCCTGAGTTAGAAGGTCACGAACTCTTGTGCAACCATCTAGCGCCAAAACTAAAAGGTCGACCTAGAGGTAAACGGAAAAAACGAAGCTTATCACAAGGATCTGAGAGCAATGAGTCTGAATCTTCAGTTACCACAAGTGTAAAGGCGGAAAGCAAAAACAGCCTGCAATTGGATCCTTCTGGAAATGCCCTGCGACGCAGCAGTCGCTGTCAtgataataatgaaaacaaagaGTTTGTTAGGAAACTTGGTTCTTTTATGAAATCCAACCGCACACCTATAGGAAGAATTCCATCGTTAGGATATAAAGAATTGAATCTTTACGAATTCTTTTCGAGAGTACAAAAACTAGGCGGATATGATTCTGTAACTACTAACCGCTTATGGAAATCCATATTCGATGAAATGAGTGGACACCAAAACAGTACAAGTGCAGCTACAGTTATAAGACGACACTATGAAAGatttttattgccATTCGAGCGTCATTCGCGTGGAGAAGAATACAAACCGTTACCTGTATCAGAGAGAAGAAGATTGAAATACAAACGAGGCAGTACTAGTGTAAGTGATGCCGAATCCAGTAGCGATAGTGCTTCAATACCATCTACATCAAGAAGGCTTTCAGTTTCGGgacaatttattgaaaataaagtaaGTATGCTTCTCTTAAGTCTACTTTAA
- Protein Sequence
- MKRLDGVEDIYLKYKIVNALGGFYVIHPNTRVLFCRDTFDYPELEGHELLCNHLAPKLKGRPRGKRKKRSLSQGSESNESESSVTTSVKAESKNSLQLDPSGNALRRSSRCHDNNENKEFVRKLGSFMKSNRTPIGRIPSLGYKELNLYEFFSRVQKLGGYDSVTTNRLWKSIFDEMSGHQNSTSAATVIRRHYERFLLPFERHSRGEEYKPLPVSERRRLKYKRGSTSVSDAESSSDSASIPSTSRRLSVSGQFIENKVSMLLLSLL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -