Ntra004666.1
Basic Information
- Insect
- Neocrepidodera transversa
- Gene Symbol
- Atf6
- Assembly
- GCA_963243735.1
- Location
- OY725336.1:14979182-14991782[-]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.8e-17 3.8e-14 53.9 10.7 3 60 277 334 275 336 0.96
Sequence Information
- Coding Sequence
- atgttaacaactGAAGATTTTATGTTGGATGATTATGTATTTAAGAGTTCACCGGAATCATGCAGCGATCATTCTTATTCTACAGattACATGGATGTTACCTCAGATGAAGACTTTTTGACACAACTATCATCGGATTTAGATATACCTTTACTATTAAATCAAGGCGAAGATGAATTCAGCATGCTGAACTCTTTGTTATTTGATAAAAGCCCTGAAGAAATCCTATCAGAAACAGCTTCCTTAGCCTATATTAGACAAGAAGTTTTATCAAGAGAAATTTCTGAACTGCAGAAAACTGATTTTACCAAGTGTGGCCCAGAATATTACCCTAATCTACAATCTGAGGTTAAAAATGAACCATCCGATGGTTCAATATCACCTAATTCCAGTAAATCTGCATCTCCTAAACCCCCAGACCAATTTATCAAAGAAGAAATAGTTATTAAATCCCCACCTCCTTCTCCTATAATACTAAACACAGTAAATGAGCTACCAAATAATATCATTTATGCACAACCAGTCAAATTATTACCTAATCCACAAAATGTATCCCAAAAACCTATACCAATAGTACCAAAAGCTTCTTACAATTTACcagtgaataaaaataaagttgtgGTTATAAACAGAGACTTAAAACCTGTCGTTACTAAACCTCATAATGTCGTACTTATGGATAACGTTACGACAGTACCTCAAATGTCTGTGCCTAATGTATCAGTCACAAATGTCACTGGTCTTTCCAAGTCTGTGACAGTGCCTTCAGtagttataaatacaaaaagtgGGTTCACTTTAAATGGTAGGAGTATTGATCCTAAGATTTTAAAGCGACAACAAAGGAAGATTAAAAATAGAGAATCTGCTAGTTTAtcgaggaaaaagaaaaaagattatgTTAGTTCTTTAGAAGAGCAAGTTAAGGAGTtgagtaattttaataaaaggttaCAAGCTGAAAATGCTCAACTCAAAGAAAAGCTTGTTCAATATGAAGCAAATCCCTTTAGTCATACTGGAAGCAAAGCCATAAAACCTAGCATATTTTTGTGCATATGTTTATTAGTTGTTGGtgtaaattttaatgtattaagGAATCCCTTTAGTATAAAATCACAAGACTTTCAATCAATACCCCAATTAAATGAGCATCACGGTCGTGGTTTACTGTGGGCGACTGATGATACGGACGTAAGAGAAAACAAAACTTCAGCTTTTTCACCGTTTTTCATGTGTCCCGCCACTATTAATCAGACAGAAAGTGCTAGATTAGTTTTAGAATTAGAAAGGTGGATAGGAAAACCTGCAAATCTTTCAACAAAAATTACCATGGatacaaataaaacagaaactgttaaaaaaatccgtCCAAGGAAGAAGAAATACAGACTTGATAGTCACACTATAACATCTTATAAGCGTTACAGatataaagATGGCCGCGAAGTAGAACCTGCTGTCAAAAATGAATTGCAAGTATTTTCTGTAAGACCCGAACATATGTTCTCGGAATTCTTTGAAGCAATTAATAGACAGGATGATACATTTTACGTAGTGTCTTTCACTGATCAACACATGCTTCTACCTGCTTTACATCATAATAAAACTAGAAGACCAAAAATGTCTCTTTTAATTCCCTCTTTTATGCCCAATGAAACCGTTTCAAAATCGTCTTTGATCCCCCTGATGCAAATCGACTGTGAAGTTCTAGATACAAGGTTGATTCATGTCAAACACGGCGCAATACCTCAACATTTTCGAATGTACAGCAATACCACCAAAAAAGAACCGACAGCTGCGGAAGTTAGCGAAAACGCCACGaaaactaattattataaaaatacttacaaGCCTTATTTTATGAAACCAAACAACAagctttttaaattaaattga
- Protein Sequence
- MLTTEDFMLDDYVFKSSPESCSDHSYSTDYMDVTSDEDFLTQLSSDLDIPLLLNQGEDEFSMLNSLLFDKSPEEILSETASLAYIRQEVLSREISELQKTDFTKCGPEYYPNLQSEVKNEPSDGSISPNSSKSASPKPPDQFIKEEIVIKSPPPSPIILNTVNELPNNIIYAQPVKLLPNPQNVSQKPIPIVPKASYNLPVNKNKVVVINRDLKPVVTKPHNVVLMDNVTTVPQMSVPNVSVTNVTGLSKSVTVPSVVINTKSGFTLNGRSIDPKILKRQQRKIKNRESASLSRKKKKDYVSSLEEQVKELSNFNKRLQAENAQLKEKLVQYEANPFSHTGSKAIKPSIFLCICLLVVGVNFNVLRNPFSIKSQDFQSIPQLNEHHGRGLLWATDDTDVRENKTSAFSPFFMCPATINQTESARLVLELERWIGKPANLSTKITMDTNKTETVKKIRPRKKKYRLDSHTITSYKRYRYKDGREVEPAVKNELQVFSVRPEHMFSEFFEAINRQDDTFYVVSFTDQHMLLPALHHNKTRRPKMSLLIPSFMPNETVSKSSLIPLMQIDCEVLDTRLIHVKHGAIPQHFRMYSNTTKKEPTAAEVSENATKTNYYKNTYKPYFMKPNNKLFKLN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00386931; iTF_00791827;
- 90% Identity
- -
- 80% Identity
- -