Ntri003842.1
Basic Information
- Insect
- Neocloeon triangulifer
- Gene Symbol
- stc_1
- Assembly
- GCA_031216515.1
- Location
- JASKYO010000005.1:1401747-1405627[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 1.3 1e+04 -3.5 3.6 3 10 328 335 327 335 0.91 2 14 1.1e-06 0.0087 15.9 16.7 3 18 348 363 343 364 0.95 3 14 9.1e-08 0.00074 19.4 12.0 1 18 400 417 400 418 0.97 4 14 3.4e-10 2.8e-06 27.1 16.9 1 19 459 477 459 477 0.99 5 14 3.9e-07 0.0032 17.3 15.6 1 19 521 538 521 538 0.97 6 14 1.9 1.6e+04 -4.1 1.4 5 10 565 570 565 570 0.91 7 14 2 1.6e+04 -8.4 13.0 3 11 578 586 576 587 0.87 8 14 0.16 1.3e+03 -0.6 1.1 4 10 591 597 590 597 0.92 9 14 8.3e-09 6.8e-05 22.7 11.1 1 18 603 620 603 621 0.97 10 14 2 1.6e+04 -4.1 0.8 6 10 650 654 650 654 0.89 11 14 2 1.6e+04 -6.7 10.9 10 19 667 677 660 677 0.77 12 14 1.1e-07 0.00088 19.1 10.9 1 16 713 728 713 736 0.91 13 14 0.0053 44 4.1 11.0 1 16 743 758 743 763 0.82 14 14 0.52 4.3e+03 -2.3 0.1 8 12 779 783 778 784 0.78
Sequence Information
- Coding Sequence
- ATGGCGTACGGTGGACCAAACTACAATAGACAAGGCTATTCGGACTTCACTAgcAACGGCCAGCAGTTCAACACGTTTACATTTCACAACAGCCAGGGTCAGCTGCAGCCAGCCCAGCCAGCATTGCTGGGCAGGCCTCCGTGGATTCAGGAATGGGAGTATTATGACCAAAATGCCCTGGCTGCCCAAGGTGGCACCTGGACACAGCAGTCGAACAATTATCCACAACGCCAGTCTAGAATCCAAAGAGGCAATACTCATAGGCAGTTTCAACGTGCTTTCAACCAACCCCAGTTCAGTGGACATCGGGACAGGCAGCCAAACCAGACAGGCCAAAATGACCAGTGGCCATCACCAGAACAATATCAAAATGGCCCAGCGCCTGCAAACAATCCATCCGAAGAGAGAAATGTTCCAGAAAGAACCAGCGATAATTTAGAggATGGTTCGAGAAGCAAAAGAGGCAGAAATCAGTCCAGAGGTAGAGGACGAGTAAAACCTGGAATGCGGTGGAGTCGAGACGGAGAAAGAGAGCCAAGATATGAAGATAGAAAGTCTGACTTTGGAGGCAGCTCAAGGACTGATCAATTCAAGTCAACTTCAAAAGAGCCTGCGGATAATATGGCTGGTGTTTGTCCCcaggaaaaggaaattaaaccTCTGAAAATTACTTCAAAGACTAATGATCCTCAGTTCAAGTCACAAAGGGAGTTCCTAATGTACCATATGAGAGCTGAGAAACTGGAGTGCATGGTTTGTTACGACACAATCAAGCACAAGAATCCCATATGGAGTTGCTCAAACTGCTACAACATTTTCCACATTTGGTGTGTTCAGAAGTGGTCCAGAACCGTCGAAGaTTCTGATGGTTGGCGCTGCCCTGGATGCAATCAAGGATTTCGAGAACCACCAGAAAAATCCTGCTTCTGCGGAAAAACGCGTCAGCAAGCAAAAGACATGAATTTAAAGAGCTACAGCAGCAAGCACTGTTGTGACGAGATTTGCTACAGAAATAAACCCAAGGTTGGCATTCATGATTGCAACCACCCTTGTGGTGAGCTTTGCCACCCTGGACCCTGTCCTCCATGTGAGGGAATGGCTTTGAGAAAATGCCCGTGTGGCAAGAAAACGGCCTCGGTGAAATGCACCTCAGACTCTCAATTTCTCTGTGATAGTACTTGTGACAAATTGCTCTCCTGCGGCAGACACAATTGCCAACTGGAGTGCCATGTTGGTTCTTGTGGAGAGTGTCTTGAAGCTATTGATCTAgagTGCATGTGTGGTCGAACGAAGGAAGAAGTCCTTTGCAAGGATGCGCCGAAAGGCGATATTAAAAACTATTCTTGCAAGCAGGCTTGTGGCAAAGATTTGGAGTGCGGCAATCACAAGTGCAAAGAGGAGTGCCACTCTGGTGATTGTCCACCATGCCCTTTGTTGCCTGAGATAAATACAACTTGTCAATGTGGCAAAGTGTCACAGAAAGCATTGCTTTTGACTCCCAGGGAGTCTTGCCTTGATCCAGTGCCTCAGTGTCCCAATAGATGCAACTTGCCTTCACCATGTGGCCACAATTGCCCTGAGAAATGCCATGCTGGTCAATGTCCTGTCTGCAAACTGCAGTCGCAGACACACTGCGCTTGTGGATCGTCCAAGAAAATGGTTCTTTGTTCTGTTTTGGCCTTTGAACCAGTGAGATGCAACAAGAAGTGCCCCAAGTGGCTTTCATGCCTTCGTCACAAATGCCACGACATTTGTTGCTGTCGGGAATCACACGAGTGCCTTCAAATATGCAACAAGTCCCTTAATTGCGGCAGGCACAGGTGTGACCAGCTGTGTCACAGTGATAGATGTCCTCCTTGTCTTTTGGCCAgttttgaTGAGCTGCGGTGCGAGTGTGGCACCGAAATTTTGTACCCTCCAATTCCTTGCGGCACGAAGCCACCAATGTGCAACAGGCCCTGCAAGAGAAGTCATCCTTGTGGCCACAACAGCCACAACTGCCACAGTGAACCAGAATGTCCTCCGTGCACAGTTCCTGTCAAAAAGTGGTGCATGGGAAAGCACAAGGAGGTGTATCCAGTCTTGTGCAACCAAGAGTTTGTGTCTTGCCACCTTCTGTGCAGCAAACCTTTGGAATGTGGGCAGCACAATTGCATCAAGAAGTGTCATGCTGGTCCTTGTCTGAACGAAAAGTGCACCCAAGCCTGCACAAAGCAAAGACCCGAATGTGGTCACTCCTGCAATTCTCCATGTCATGGACCTGCTTCCTGTCCCGACTCCAAATGCATGTTTGAGctgAAAGTCACTTGTGAATGTAAAACCCGGAGTGAAATGCGTCCCTGCCATCAGCAGCTGGAGGCCTACAAGAAGAAAGTCCAGATGGACGCCCTGGTCGAAAACATGTCTGATTTGATGAAAGGCCAGAAAGTCTCTTTGCCAGGAGCCGTTTCCAACGTACCCTTGGCGCATTGGACTTCTGTTGTTGGGCTTGAATGCGACCACGAATGCAACATCAAAAGGCGGAACGAACGTGCCTTCGTCGGTCTGCAAATCGTTAATCCAGACCTTGGTCAAAAGCTCAAGCTAGAGTATCCAATTTCCTTGCTCAATTGGGTGGCTCAAGACAAGGAGTTTGTCAAAGAGGTGCACAACATCCTTGCCGATTTGGTCTATCAAACTCAGCAAggACCTCAAAGATTCAGACTGCACAGTTTTGGCGTCATGAATCAAATGAAGCGCAAATTCATTCATGAATACGCGCCTTACTTTGGCTTGCAATCAAAGTCAATTGACAAAAGGCATTCCAGAAGTGTGGATGTAACTGGCGAGAAAaacaatTGTTGGTTGCCAAGCATCAGTCTGCACGAAATGGTCGAAAGGAAACTGACCCACTCAAGCTCAAAGTGA
- Protein Sequence
- MAYGGPNYNRQGYSDFTSNGQQFNTFTFHNSQGQLQPAQPALLGRPPWIQEWEYYDQNALAAQGGTWTQQSNNYPQRQSRIQRGNTHRQFQRAFNQPQFSGHRDRQPNQTGQNDQWPSPEQYQNGPAPANNPSEERNVPERTSDNLEDGSRSKRGRNQSRGRGRVKPGMRWSRDGEREPRYEDRKSDFGGSSRTDQFKSTSKEPADNMAGVCPQEKEIKPLKITSKTNDPQFKSQREFLMYHMRAEKLECMVCYDTIKHKNPIWSCSNCYNIFHIWCVQKWSRTVEDSDGWRCPGCNQGFREPPEKSCFCGKTRQQAKDMNLKSYSSKHCCDEICYRNKPKVGIHDCNHPCGELCHPGPCPPCEGMALRKCPCGKKTASVKCTSDSQFLCDSTCDKLLSCGRHNCQLECHVGSCGECLEAIDLECMCGRTKEEVLCKDAPKGDIKNYSCKQACGKDLECGNHKCKEECHSGDCPPCPLLPEINTTCQCGKVSQKALLLTPRESCLDPVPQCPNRCNLPSPCGHNCPEKCHAGQCPVCKLQSQTHCACGSSKKMVLCSVLAFEPVRCNKKCPKWLSCLRHKCHDICCCRESHECLQICNKSLNCGRHRCDQLCHSDRCPPCLLASFDELRCECGTEILYPPIPCGTKPPMCNRPCKRSHPCGHNSHNCHSEPECPPCTVPVKKWCMGKHKEVYPVLCNQEFVSCHLLCSKPLECGQHNCIKKCHAGPCLNEKCTQACTKQRPECGHSCNSPCHGPASCPDSKCMFELKVTCECKTRSEMRPCHQQLEAYKKKVQMDALVENMSDLMKGQKVSLPGAVSNVPLAHWTSVVGLECDHECNIKRRNERAFVGLQIVNPDLGQKLKLEYPISLLNWVAQDKEFVKEVHNILADLVYQTQQGPQRFRLHSFGVMNQMKRKFIHEYAPYFGLQSKSIDKRHSRSVDVTGEKNNCWLPSISLHEMVERKLTHSSSK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -