Ntri007004.1
Basic Information
- Insect
- Neocloeon triangulifer
- Gene Symbol
- pnr_2
- Assembly
- GCA_031216515.1
- Location
- JASKYO010000011.1:4745234-4749365[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2 5.5e+03 -3.1 1.2 20 26 12 18 5 18 0.72 2 2 1.5e-17 4e-14 51.8 3.9 1 35 357 390 357 391 0.98
Sequence Information
- Coding Sequence
- ATGTGCAGCGTGCCGAACAAATTCTACGAGCTGTGCCGCCTGTGCTTGTCGTGCGACGGCGTCAAGCTGTCCATCTTCGACGGCGAGGGCTCCCAACGCAACTTTCCTCTCAAAATCATGACGTGTCTCTCCGTCCTGGTGTCTGAACACGACCTGCTGCCATCCTTGATATGCCACAGATGTGTTTACAAACTGGATGTGCTGTACGACTTCAGAGAGGTCTCGCGCAAGTCAGATCTCATTCTGAAGCAATACCTGAATTACACCCAGCAATTATCAATCTCTCGAcagGGGATTCAAGGAATGCAAGATGAAGGCAGTTCTGGTGCCGAAGATGAAAACATGCCTTCAAAAGGCGACGCAATGAGTTTTGTCAAAGTCGAGAGTGAGGAGCCGCCTGACGAAGATGAAAAAGGGGCGCCCCCTGAGGGCGATTCGGAGCCAGAGGAGGCCGAAGGAGCGCTGCAAATTGTGATGGGCAGCGACCAGGAAAGGGAAGACGAAAGTGACAAGGAGCACACGCCGCACCCCATCAAATCACTGCCAGCGCTACACAAGTTCACAAGAAAGTGGTCCGACAGTGGGACGAGAATGAAAACGGAGACTGGCGAGGCGGACAGTGCGTCCGAAGCGAGTGTCCaggctgaaaaatttgttcgAGACTTCCAGAAAAACACCATTTGGCTACAAAACATGAgCACATTAAAACATGAAGAAGAGGATGAAGATTTGAATCACCCTACGCAGCCTTTTGACCTTCGCACCTTCATTTCGAGGACCCAAATGGCTCCCTCGTCCTCCAACTCCAAGTCGACGTCCTCATCAGGCATCGAGTTGCGACGGGCGGACGGCAGTTCCCTCCCAGGTGTGTCAGTGGCCGACCTGCTGGCAATGCAAGCAAGTCGCAACCACCAGCAGGAGCAGCACTCGGAAGAGGCACAGCCGGAGCCACCAGACGCCATGGACGCCGAGCCGCACTTCCTCTCGCAGCTGTCCAGCGCCAAGGGTCCTCCTTGGAACATTTTTAAGAAGCAGCCGAGCGTGGCGGCCAAACGGGTGGACCTTTGCTGCACCAACTGCGGCACCAAGACCACCACCATCTGGAGACGGAACGCCGAAGGCGACATGGTGTGCAATGCGTGCGGACTGTACTTCAAACTGCACGGTGTAAATAGGCCAGTCACCATGAGGAGGGACACGATCCACACCAGGAGGCGGCGGCCCAAGCGGCAGCGTACGAGAAACGCCCCCGAGAGCAACGGAGATCCCACTGTCAGTCCTCCCGAAGCTGAAGAGCCATCGTCTCACATGCAAATCTCCAAGTCACTCCTCTTTTCACCAATGTTGCCCAACTTGACCATTCGTGCCTCATCAGACTCCTCTCAGCCCACTGGCCGAGATTCCGCCTCTCTGGAGGACGCCGACGACGAGGATGGCACTGCACTTGCCCTGGTCGCCGTCAAGACCGAGTTGCACGTGTCGGACGACGAGAGGGAGGAGCACGAGGAGGGCCCTCTCAACCTGGCCGCAACCACCACCACCTCCTCTCTCTAG
- Protein Sequence
- MCSVPNKFYELCRLCLSCDGVKLSIFDGEGSQRNFPLKIMTCLSVLVSEHDLLPSLICHRCVYKLDVLYDFREVSRKSDLILKQYLNYTQQLSISRQGIQGMQDEGSSGAEDENMPSKGDAMSFVKVESEEPPDEDEKGAPPEGDSEPEEAEGALQIVMGSDQEREDESDKEHTPHPIKSLPALHKFTRKWSDSGTRMKTETGEADSASEASVQAEKFVRDFQKNTIWLQNMSTLKHEEEDEDLNHPTQPFDLRTFISRTQMAPSSSNSKSTSSSGIELRRADGSSLPGVSVADLLAMQASRNHQQEQHSEEAQPEPPDAMDAEPHFLSQLSSAKGPPWNIFKKQPSVAAKRVDLCCTNCGTKTTTIWRRNAEGDMVCNACGLYFKLHGVNRPVTMRRDTIHTRRRRPKRQRTRNAPESNGDPTVSPPEAEEPSSHMQISKSLLFSPMLPNLTIRASSDSSQPTGRDSASLEDADDEDGTALALVAVKTELHVSDDEREEHEEGPLNLAATTTTSSL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -