Basic Information

Insect: Neocloeon triangulifer
Gene Symbol: -
Assembly: GCA_031216515.1
Location: JASKYO010000011.1:7753106-7757270[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 0.92 54 4.4 0.1 2 23 455 477 454 477 0.93

2 17 0.0023 0.14 12.6 0.1 3 23 484 505 483 505 0.95

3 17 0.0004 0.024 15.0 0.9 1 23 531 554 531 554 0.94

4 17 0.0038 0.23 11.9 0.6 2 23 570 592 569 592 0.96

5 17 0.57 34 5.1 5.8 1 23 598 620 598 620 0.96

6 17 0.0053 0.31 11.5 1.7 3 23 628 648 627 648 0.99

7 17 0.12 7.2 7.2 2.5 3 23 654 673 653 673 0.97

8 17 4.1e-05 0.0024 18.1 0.2 1 23 679 701 679 701 0.97

9 17 0.015 0.9 10.0 4.0 1 23 706 729 706 729 0.98

10 17 7.1 4.2e+02 1.6 0.1 1 23 738 763 738 763 0.88

11 17 0.18 11 6.6 0.6 1 23 780 803 780 803 0.96

12 17 0.18 11 6.6 1.9 1 23 811 833 811 833 0.97

13 17 0.069 4.1 7.9 1.7 1 23 839 862 839 862 0.93

14 17 0.13 7.6 7.1 0.1 2 23 868 888 867 888 0.93

15 17 0.00024 0.014 15.7 1.5 1 23 894 916 894 916 0.98

16 17 0.012 0.71 10.3 1.4 1 23 930 952 930 952 0.95

17 17 0.033 2 8.9 2.9 1 21 958 978 958 982 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	0.92	54	4.4	0.1	2	23	455	477	454	477	0.93
2	17	0.0023	0.14	12.6	0.1	3	23	484	505	483	505	0.95
3	17	0.0004	0.024	15.0	0.9	1	23	531	554	531	554	0.94
4	17	0.0038	0.23	11.9	0.6	2	23	570	592	569	592	0.96
5	17	0.57	34	5.1	5.8	1	23	598	620	598	620	0.96
6	17	0.0053	0.31	11.5	1.7	3	23	628	648	627	648	0.99
7	17	0.12	7.2	7.2	2.5	3	23	654	673	653	673	0.97
8	17	4.1e-05	0.0024	18.1	0.2	1	23	679	701	679	701	0.97
9	17	0.015	0.9	10.0	4.0	1	23	706	729	706	729	0.98
10	17	7.1	4.2e+02	1.6	0.1	1	23	738	763	738	763	0.88
11	17	0.18	11	6.6	0.6	1	23	780	803	780	803	0.96
12	17	0.18	11	6.6	1.9	1	23	811	833	811	833	0.97
13	17	0.069	4.1	7.9	1.7	1	23	839	862	839	862	0.93
14	17	0.13	7.6	7.1	0.1	2	23	868	888	867	888	0.93
15	17	0.00024	0.014	15.7	1.5	1	23	894	916	894	916	0.98
16	17	0.012	0.71	10.3	1.4	1	23	930	952	930	952	0.95
17	17	0.033	2	8.9	2.9	1	21	958	978	958	982	0.91

Sequence Information

Coding Sequence: ATGGTTAAATTCAAAGGAAAGAAGTGTCACTACTTCCGATGTGTCACAAACCAGTACGAGGAGGCATACGACTGggaaaagaatgaaataacACTACACTCAATTCCCCTGCAaacGAGAGCAGCGAATCTCTGTCGGATGAACATTGCCTCCTACCCAATAAAGATCCCGGAATTGACGTCAATCCGCATCTGCTCAATGCATTATCCAGATTCTGCATTTCGATACCGCTGCAAATTGCCTAACGGCTCAGTGAGACAAAAACTGAACAGAGATGCCTTGTGCTACGACTGGAGAGACTCGTGTAGCAAAGAGGAAGTTGAAGagATTGAGTCTCGAGCTTCGTTTCGGAAAGGAGACAACATTGAAGAGTTCATTGAAGAACAGCAAGCAGGCTTTGGCGGAAGTCGCTACGGTAGCATCCCTCCAAGGATTGAGCATGACTATTCGCAACCTGATCCCTGTATTATTGTTCCTCCTAGTGTGACTCGAAATGAAGTGGAACTAGTTCCACTCGTACCAACCACTAAAATCAAACCGGGGGTGAACTTGAAAGTGGCACGCAAAGAGACAATGgagatttttgtgaaaaatcaattgatgGAGCTTAGGGAACTTGGGCGAATGGACAATCCAAATCCCCCACATATGTTGACAAGAGAAGAATTTTTGGCTCTTGAGGGAAGATCAATTCCTCGGCCACCTGATGAGGAAGAGGAGGATCAGCAGCAGGAGGAGGTGGACCCACTTTCCCCTGTGCCCCCTGTGGAGGAGCTAGAGGAAGAGCCAATTCCCATAATTACTGAGCCAGAGACATTGCTCAATAAAGAGCGGGTTTGCCGACTGTGCTCCGAGATAGAAGTGCCACTTATTGGGATATTTGATCACCAGGGTCGCAGCATTCAGCTCTCTGAGAAAATCAATGAAGTTATGCCAATCTTTgtgTCCGAGTTAGATGATCTGCCGTTAAAAGTTTGCATTCAGTGCATCAACAATATCGAGTCAATCTATTACATGTACAACCAAGTTGCAAAAGCTGACAAATATTTGAAGTCTAAATTCAACGTACCTGAAGAACCAAAACCAGCAGAAAAGGTTGACGTGCTGAAAGCCATTATGGAAGACGTAGGAATAGATAACGATGATCACGAAGACACAGAAAGAATGGGTGACAAAGATTCCGATAGTGTTGGCTACAAAAATACTGCCAGCATGGACTTTCCAGACGATGGTGGTGCTGAAGACAGTGATCAATCAGACCAAATGGATATGGACGAGGAAAACACCGTTAGCAACGGAGTCCTAAGTTTGGCCCTGGAAAATGTGCTAGACCCTACCTTTGAGGCTACTTTCACGCCACTCTACTGCTCAAGGTGCAATATTACTCTAGCCAACCCTGATGAGTACCTGGGGCACTTCCAGAGTATCCACTTCCGCAAACTGGTGGCCTGCCCAATCTGCCAAGTTTTCTACAGCAACCAAGGTCTTCTGAGGGTTCACTGGAACCAGTTTCACTCTAAAAGTATAAAGAGAGTACCAGTGGTGAAAAAGAAGATATTGTTGAGGAGAATGCCAAAATCTTTAGTTTGCTATAAGTGTAAAAACTGTGACGCTTCCTTCTATGACATAAGTTTGTTTAGGAAACATGTGTCCGAGGAGCACCCGAAAACACGAAAGGCTCGAGTATGTCTAGAGGAGCCAACTGTCAAGTGTGACTACTGTGATGAGATGTTCATTACTACTAGGAAGAAGGAAAATCACATGGAGAAAGCGCACACACAGTACAAACCACACAAATGCAGATTCTGTCCAAAGGTATTCCGTCTGCGGATCAGCAGGAAGCACCACGAGGACACTCATTCTTCGGAAAATGCAGTTCTGTGTCCTAAGTGTGGAAAAATCTTTGGCTCAAGACCTTTCCTCACTTGCCACTTGCGTACGCACATGGAACCAGTGGCATGTCGAGTTTGTTCAAAGATGTGCAGACCAGACAGGTTGAAACTGCACATGATGCGCCACAAAGGAGAACGTAATTTCCAGTGTCCCGAATGCCAGATTAAGTTCCCTACATCAGCCTCCCTGAGCCAGCACAGGCAGGCCCACGTGGACAGGCGTTTCACTTGCAATTTGTGCGGCTACATGACCAAACGGAAGTTCCTTATGCATGGTCATTTGCGACGGACACATACTGCCTCGTTGGGTCACGGCTTCTTCCGGTGTGCCATCGGCAACTGCGATGGTGAGTTCAACGATAATACAAAGTATTACGACCACGCAGTCAGTGTCCATCAGACTGGCAGCCTCCTCAAAAATGATCTTGAAGATGGCGTAGACAGCTTCTACTGCAGgTATTGCGACAGCCAGTTTGATACTCCCATGATTGTGATGACCCACATGAGACGAGTGCACAATGAGGTGGAGACTCCAATACACAGCTGCTCTGTTTGCAAGCTGGAGACCAATTCAATTTACAAACTGATCAACCACCTTTTCACCCACCCTGAGAGTCTCAGGTACAAGTGTCGAGTGTGCTTTGAGAAGTTCCCAACGTCCCGCAACAGATCTGCCCATGAGTACAAAGAACACTACAAAAATCGCAAGCAGTGTCCCTACTGCGATCAAAAAGTGTCACCGATCAACTTTGAGAACCACGTTGCCTTGCATATggATGACAAGCAGTACACTTGTGAGATATGTGACCGTTCGTTTGTGGAACATAACAAGTGGAAAATCCATATGGACAAACACAAACTCTCCAAAGAAGAGGGTGGATTGGTTGGTAGCACCTTCCCTTGTAGGCACTGCGGGCAGACCTTTGAGAATGGAAACAATCGACGGTGGCACGAGAATCTGCACACAAAACCGAAGGTTTACAGTTGCCCTGACTGTGAATTTTCATGCACCAACAAGATGACGGCCAAAAAGCACAGACAGGAAAACCAACACGCCAAACATATCTTGCACAAAAGAGATGTCAAAGATTTGAAGTTCAAAATTGATGAGGAGGAAGTTCAAGCTGAAGAAATAGAGACACAGGAAATTGACCAAGTTCAATATTCATACATACTTAGCATGTAG
Protein Sequence: MVKFKGKKCHYFRCVTNQYEEAYDWEKNEITLHSIPLQTRAANLCRMNIASYPIKIPELTSIRICSMHYPDSAFRYRCKLPNGSVRQKLNRDALCYDWRDSCSKEEVEEIESRASFRKGDNIEEFIEEQQAGFGGSRYGSIPPRIEHDYSQPDPCIIVPPSVTRNEVELVPLVPTTKIKPGVNLKVARKETMEIFVKNQLMELRELGRMDNPNPPHMLTREEFLALEGRSIPRPPDEEEEDQQQEEVDPLSPVPPVEELEEEPIPIITEPETLLNKERVCRLCSEIEVPLIGIFDHQGRSIQLSEKINEVMPIFVSELDDLPLKVCIQCINNIESIYYMYNQVAKADKYLKSKFNVPEEPKPAEKVDVLKAIMEDVGIDNDDHEDTERMGDKDSDSVGYKNTASMDFPDDGGAEDSDQSDQMDMDEENTVSNGVLSLALENVLDPTFEATFTPLYCSRCNITLANPDEYLGHFQSIHFRKLVACPICQVFYSNQGLLRVHWNQFHSKSIKRVPVVKKKILLRRMPKSLVCYKCKNCDASFYDISLFRKHVSEEHPKTRKARVCLEEPTVKCDYCDEMFITTRKKENHMEKAHTQYKPHKCRFCPKVFRLRISRKHHEDTHSSENAVLCPKCGKIFGSRPFLTCHLRTHMEPVACRVCSKMCRPDRLKLHMMRHKGERNFQCPECQIKFPTSASLSQHRQAHVDRRFTCNLCGYMTKRKFLMHGHLRRTHTASLGHGFFRCAIGNCDGEFNDNTKYYDHAVSVHQTGSLLKNDLEDGVDSFYCRYCDSQFDTPMIVMTHMRRVHNEVETPIHSCSVCKLETNSIYKLINHLFTHPESLRYKCRVCFEKFPTSRNRSAHEYKEHYKNRKQCPYCDQKVSPINFENHVALHMDDKQYTCEICDRSFVEHNKWKIHMDKHKLSKEEGGLVGSTFPCRHCGQTFENGNNRRWHENLHTKPKVYSCPDCEFSCTNKMTAKKHRQENQHAKHILHKRDVKDLKFKIDEEEVQAEEIETQEIDQVQYSYILSM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -