Basic Information

Insect: Neocloeon triangulifer
Gene Symbol: -
Assembly: GCA_031216515.1
Location: JASKYO010000013.1:26344398-26347577[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.21 13 6.4 0.6 2 23 137 158 136 158 0.95

2 15 2 1.2e+02 3.4 0.1 9 23 234 249 225 249 0.78

3 15 0.11 6.5 7.3 0.1 1 23 259 281 259 281 0.98

4 15 0.0044 0.26 11.7 0.8 1 23 287 309 287 309 0.97

5 15 0.0007 0.042 14.2 1.2 1 23 319 344 319 344 0.96

6 15 1 61 4.2 0.4 2 23 376 398 375 398 0.94

7 15 0.21 12 6.4 1.3 2 23 405 426 404 426 0.92

8 15 0.00082 0.048 14.0 1.9 3 23 438 459 438 459 0.95

9 15 0.00058 0.034 14.5 2.4 1 23 503 525 503 525 0.95

10 15 0.052 3.1 8.3 0.6 2 20 529 547 528 549 0.95

11 15 0.0021 0.13 12.7 0.1 1 23 557 579 557 579 0.96

12 15 3.2e-05 0.0019 18.4 0.1 1 23 585 608 585 608 0.97

13 15 0.0017 0.1 13.0 2.2 1 23 614 636 614 636 0.97

14 15 0.00095 0.056 13.8 0.3 1 23 642 665 642 665 0.95

15 15 0.0028 0.16 12.3 0.4 1 21 671 691 671 692 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.21	13	6.4	0.6	2	23	137	158	136	158	0.95
2	15	2	1.2e+02	3.4	0.1	9	23	234	249	225	249	0.78
3	15	0.11	6.5	7.3	0.1	1	23	259	281	259	281	0.98
4	15	0.0044	0.26	11.7	0.8	1	23	287	309	287	309	0.97
5	15	0.0007	0.042	14.2	1.2	1	23	319	344	319	344	0.96
6	15	1	61	4.2	0.4	2	23	376	398	375	398	0.94
7	15	0.21	12	6.4	1.3	2	23	405	426	404	426	0.92
8	15	0.00082	0.048	14.0	1.9	3	23	438	459	438	459	0.95
9	15	0.00058	0.034	14.5	2.4	1	23	503	525	503	525	0.95
10	15	0.052	3.1	8.3	0.6	2	20	529	547	528	549	0.95
11	15	0.0021	0.13	12.7	0.1	1	23	557	579	557	579	0.96
12	15	3.2e-05	0.0019	18.4	0.1	1	23	585	608	585	608	0.97
13	15	0.0017	0.1	13.0	2.2	1	23	614	636	614	636	0.97
14	15	0.00095	0.056	13.8	0.3	1	23	642	665	642	665	0.95
15	15	0.0028	0.16	12.3	0.4	1	21	671	691	671	692	0.94

Sequence Information

Coding Sequence: ATGGAGTATTTCCTGGACGCAAACGATGGGCTAGCATTAGCAGTTCTGCCCGGCATAGACGAATCTAACAAGAATGATTCAACAGAAGAAAAAGCATCAACGAACCTAACAGATTTGACTCTCTTGTGCCGAATGTGCGCCAGACAGTGTGTGGAGAACCCTGACTTGGGCGCTGTTTTTCTAACTAAAGAATTAGCCGAAAAACTCAAAGCCTTTTTGGATATCgagattgaAGGTGACAGTGAGCACCTGCCAAAGCAGCTGTGCCAGGAGTGCAGCTTTGCCCTGGAGCGATGGGCTGAAATCCGTGAAATGGTCAAACGTTCGAAGACCTTTTACCAAAACCAGCTGGAGCTCCGAGGTGTCGAGGTGGCCAAAACTCCGCTCAAGGTCCAGGAGGTGTCATTGCACTGCGCCAAGTGCAACTCCCTGTTTTCGGACTTTGCCAGTCTCGTCGTCCACGAACTGACTCATCTGCCCAAAAGCCCcaagaaaatgagaaaagatttaattaattcctccGACGAGTCTGCGGAAGACGACGATGATGTCGATTACGAGCCGACGGTGTCCACTTCTTCAATCAGTGGCTGTAAAAGACGCGTTTCAGCCAGAAACTCCACTGTGGCCAGACAGTCTTTGACATGCGGACActGTCGACAAGTAGAGGTTTTTCCCTGTGGTAGCTGCTCTGTTGGTCCGTTTGCCTCAAAATCCGCTCTTCAGCAGCACTCAGAGAAATGGCACCGACAGGCCAAACTGCCAAAATCAGCATTTCCCTGCGGCCTGTGCAGTTTGGGTTTTGATGAGTTTGTCGACTACTCTAAACACGTCCAGACACACGTCAACTTTCGACACTTCCCCTGCGCCTTGTGCGGCTGCAAATTCACCAAAGTGCCTTACCTGCTGGACCACATCAAGCAGCACTCGGCCGGCGACAGCAGACAGATCACTTTCATGTGCGAGATCTGTCCAGATCAACAGGTCTTCAGCAGCAAACACAATCTGGCCTCGCACATGACCAAGAAGCACAGAATGCCTGCAAAAGTCCGACCACCGCCGAAGACCTTTGAACCTTCCAACTTCTTTCCCTTCGGCCAGGAGAGTGCTGGAGATCTTGAGCTGGAGTGTGGCCTCTGCAGTGAAGTCCTCAATTCGTGTCAGATGCTGTCCGAGCATGTCGAGCGCCAGCACAAAAAGTTCAAACACATTGTGTGCAAAAAGTGCCAGTGCAAGTTCACCAAGCTGCCCTACTACTTGGAACACGTTGCAGAGCATGTGGCGCACCCCGACAAGGTGATGGCCATCGGCTGTGAGGCGTGTGATGAGATTTTCAGTAGCAAGCACAATTTGTCCAAGcatatttacaaaaagcaTCGCAACACCTACGCCAAGCTGAGCGCACAGAGACACAATAATGATGATCAAAATCAGgCAGTGAAAGAGGTTGCCGCTTCAGACGAGGAGCCCAAATTTGAGGTGGAACGGAATCCAAAGACCCGACTTTTCCACTGCAAAAACTGCCCGGAAACGTTTAAAAGCGCAACTTTACTCAACACACACTTTTTGGAGCACGTCCCTAACAAGTGTCCAACATGCCACGGCCTGTTTGAGACGCGCGAGCAGCTCAAGGAACATTTGACCCAAAAGTGCCGGCAGGAGGAGAAGTTCCCGTGTCCAATCTGCGGCAAACTTTTGGCCACCAAACAAAGCATGCGGATTCACACCTCGCTTCACTCCAGCGAGCGGAAATTTGTGTGCGAGGTTTGCGCCAAGACATACCGGACACAGTCAGCTCTTGTCAGCCACCGCAATGTGGTGCACTTGCAGAAGTCACAGTTCATGTGCCACATTTGTGCAAGgactttttctttcaaactgGCCATGAAACGACATGTGATGCTGCACATGGGTGACCTCCCGCACAAATGCATGGCCTGCGATAAGGCCTTTGTCACGGCCAACCTGCTAAAAATTCATGTGGCCAAAGAGCATGAAAGGCGCGTTCAGCACTTCTGCACCAGCTGCAAAAAAGGCTTTGTTGACATCATTGGCCTGCGTCGCCACATGCGGGCCGTGTGTAAAGTTCCAGAGCATGCCATTCCCTACATTAGGGACCGTCAGTTTGTAAAACACTCGATGCACCAATGA
Protein Sequence: MEYFLDANDGLALAVLPGIDESNKNDSTEEKASTNLTDLTLLCRMCARQCVENPDLGAVFLTKELAEKLKAFLDIEIEGDSEHLPKQLCQECSFALERWAEIREMVKRSKTFYQNQLELRGVEVAKTPLKVQEVSLHCAKCNSLFSDFASLVVHELTHLPKSPKKMRKDLINSSDESAEDDDDVDYEPTVSTSSISGCKRRVSARNSTVARQSLTCGHCRQVEVFPCGSCSVGPFASKSALQQHSEKWHRQAKLPKSAFPCGLCSLGFDEFVDYSKHVQTHVNFRHFPCALCGCKFTKVPYLLDHIKQHSAGDSRQITFMCEICPDQQVFSSKHNLASHMTKKHRMPAKVRPPPKTFEPSNFFPFGQESAGDLELECGLCSEVLNSCQMLSEHVERQHKKFKHIVCKKCQCKFTKLPYYLEHVAEHVAHPDKVMAIGCEACDEIFSSKHNLSKHIYKKHRNTYAKLSAQRHNNDDQNQAVKEVAASDEEPKFEVERNPKTRLFHCKNCPETFKSATLLNTHFLEHVPNKCPTCHGLFETREQLKEHLTQKCRQEEKFPCPICGKLLATKQSMRIHTSLHSSERKFVCEVCAKTYRTQSALVSHRNVVHLQKSQFMCHICARTFSFKLAMKRHVMLHMGDLPHKCMACDKAFVTANLLKIHVAKEHERRVQHFCTSCKKGFVDIIGLRRHMRAVCKVPEHAIPYIRDRQFVKHSMHQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -