Ntri007371.1
Basic Information
- Insect
- Neocloeon triangulifer
- Gene Symbol
- -
- Assembly
- GCA_031216515.1
- Location
- JASKYO010000011.1:7743222-7752233[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 33 4.3 2.5e+02 2.3 0.5 2 23 441 463 440 463 0.92 2 33 0.16 9.3 6.8 1.0 1 21 468 488 468 491 0.87 3 33 0.0072 0.43 11.0 3.3 1 20 519 538 519 540 0.95 4 33 0.0046 0.27 11.7 1.4 1 23 557 580 557 580 0.97 5 33 0.075 4.4 7.8 5.1 1 23 586 608 586 608 0.97 6 33 0.00015 0.0086 16.4 0.3 3 23 616 636 615 636 0.99 7 33 1.2 69 4.1 0.2 2 23 641 661 640 661 0.94 8 33 8.1e-06 0.00048 20.3 0.2 1 23 667 689 667 689 0.98 9 33 0.0012 0.07 13.5 2.3 1 23 694 717 694 717 0.98 10 33 0.033 1.9 9.0 0.2 1 23 726 751 726 751 0.93 11 33 0.011 0.65 10.4 0.5 1 23 768 791 768 791 0.96 12 33 0.044 2.6 8.6 0.6 1 23 799 821 799 821 0.98 13 33 8.3 4.9e+02 1.4 1.9 1 15 827 841 827 850 0.79 14 33 1.4 83 3.8 0.4 2 23 856 876 855 876 0.95 15 33 0.0026 0.15 12.4 1.4 1 23 882 904 882 904 0.98 16 33 0.064 3.8 8.0 4.7 1 23 915 937 915 937 0.95 17 33 0.0029 0.17 12.3 2.8 1 22 943 964 943 967 0.92 18 33 0.016 0.93 10.0 1.0 2 23 1356 1378 1355 1378 0.95 19 33 0.0064 0.38 11.2 1.1 2 23 1384 1406 1384 1406 0.96 20 33 0.036 2.1 8.8 2.0 1 23 1429 1452 1429 1452 0.95 21 33 0.031 1.8 9.0 0.2 2 23 1468 1490 1467 1490 0.94 22 33 0.0035 0.21 12.0 3.6 1 23 1496 1518 1496 1518 0.98 23 33 0.67 39 4.8 0.1 3 23 1526 1546 1525 1546 0.96 24 33 5.8e-05 0.0034 17.6 0.4 1 23 1577 1599 1577 1599 0.97 25 33 3.3 2e+02 2.7 2.2 1 23 1604 1627 1604 1627 0.95 26 33 1.7 1e+02 3.5 0.2 1 23 1636 1661 1636 1661 0.88 27 33 0.54 32 5.1 0.7 1 23 1678 1701 1678 1701 0.90 28 33 0.024 1.4 9.4 0.8 1 23 1709 1731 1709 1731 0.98 29 33 2.3 1.3e+02 3.2 1.9 1 23 1737 1760 1737 1760 0.91 30 33 3.4 2e+02 2.6 0.4 2 23 1766 1786 1766 1786 0.81 31 33 0.00078 0.046 14.1 0.2 1 23 1796 1818 1796 1818 0.98 32 33 1.9 1.1e+02 3.4 0.8 1 11 1833 1843 1833 1849 0.88 33 33 4.4 2.6e+02 2.3 2.2 1 20 1861 1880 1861 1885 0.74
Sequence Information
- Coding Sequence
- ATGGAGAAATTTGAGGAGAAGAAATGTCACTACTTTCGGTGCGTCACAAACCAGTACAAGGAGGACGACTGGGAAAAGAATGAAGTCTCACTTTTGTCCATTCCTATCAAAATGAGGAGGGAGATTTTTGATCGGATGAACATTTTCTCGTATCCAATTCGAAAAATCCCAACAATGAATAAAATCCGCATCTGCTCCTTGCATTTCCCAGAGTCAGCTTTTCTGTACCGCTGCAAATTACTTCATGGCACAAGTCATAAATTGAAGGACGATGCAGTATGCTACGACTGGAAGGACTCATGCAGCAAGGAAGAAATAGAAGAGattgaGGCTCGATCTTCATTCCGAAAAGGAGACGACATTGaaaagttcattaaaaaacagAGAGCAGACTTTGTCAGAGGTTGCTTGGCTCCAAGGATTgagCATGGCTATTCGCAGCGCAATCCCTTCGTTAAAGTTCCTCGCGATGTTGTTCGAGATGAAATAGAACTAGTTCCACTCATTGCAACCAGCATCATAGTACCAGGAGTGAACCTAAAAGAAGCGCGCAGAGAAACGAAGGAAATTTTTGTGAGAAACCAGTTGATTAAGCCAAGGGAACTCGAGCAAAGAAACTCAAATCCACTGCACATGTTGACAAGAGAAGAGATTTTGGCCCTGGAGGTCAGAAATTCCTCACCTCTTCCCTCTgatgaggaggaggaggaggagtgTCAGCAGAAGGACTCCAATCCTGTGGATGATGAGCCTATTCCTGTGATTTCCAGTATGCCACTGAATAAGGAGCGTGTCTGTCGGCTTTGCTCTAAGGTTGAATTGCCACTGATTGGGATTTTTGAAGACTCGGGCTGTGACATACagctttctaaaaaaatcaatgatgtGTTGCCAATCCAGgtgTCTGAATCAGATGATCTGCCACTGAAAGTTTGCATTAAGTGCATCAACGCAGTGGAATCCATTTACCACTTGTACAAAATAGTTGCTAAAGctgataaatatttgaggTTTAAATTCCATTTACCTGAACAACCAAAAGCGCGAGAAAAAGTTGATGTTCTCAAAAACATAATGGAAGAAGTTGGAATAGATGACGATGATCAAGACGATGCAGGTAGAATGGACCATGAAGATGCAGATAGTATTGGCTGTGGAGATACTGGTAATATGGGATTTCCAGATGATGATGGCGTCCAAGATGACAATCAAGGGGATCAAATGGAAGAGGATGAAGAAACTACTATTAACAAAGAAGCCCTGCGTCAGGCTCTTGAGAAAGTTCTGGACCCCACCTTTGAGGCCACTTACCCGACATTAGTCTGCTCAATGTGCAACATTAGCTTGGCCGGATGTGATGAGTACCTGGCGCATTTCAAACAACGGCACAGCCGCAAGCTTTTTTGTTGCCCAATCTGCCAAGTTTTCTTCAGCAACCAACTTGTGTTCAGGGCTCACTGGGGCCAATTGCACCCTACAAGTAAGCAGAAACCAACAGCGCTCAGGATTAGGAGAAAGAGATTGTCTAGGAAATTGCCAAAGGTTTTAACATGCTACCGATGCAAACAATGTGACAATTGCTTTTACGACAAGAAGTTGTTCACGAAGCATGTATTGGCAGAGCAGAAAGAAGCTCTCAAGTTCCTAGAGTCTCTAgaaaaaccaaatttcaaatgtgaCTACTGTGATGAGATGTTCATGACTGAGAGGAAGAAGGAAAATCACATGGAGAAATTGCACCCACAGTACAAAACACACAAATGCAGTCTCTGTCCAAGGGTATTCCGACTGAGAAGCAGCAAGAGGCATCACGAGGACACTCATGTTTCGGCAAATGCAGTTCTGTGTCCCAAGTGTGGAAAACTCTTTGGCTCAAAACCTTTCCTCAATGCCCATTTACGAACTCATATGGAACCAGTGCCATGTCGAGTTTGTTCAAAGGAATTTGCTCCAGACAGAATGAAACTGCACATGATGCGCCACAAAGGAGAACGCAACTTCCAGTGTCCTGAGTGCAAGATCACATTCCCTTCAGCAGGGTCACTGAAACAGCACAGGCAGGTGCACGAGGACATGCGTTACTCTTGCGATTTGTGCGGCTACATGACCAAACGCAAGTTCTTGATGACGACACACTTGCGACGGACACACGTCACCGAAATAGGTCATGGCTTCTTCCGGTGTACAATTGGTGGCTGCGACGCTGAGTTCAGCAATAACTCAAAGTTCTATGACCACGCCCTGAATGTCCACAAGACTGGCATCCTCCTCCAAAACAATCTTGAAGATGGAGTTGACAGCTTCTATTGcaagTATTGCAACAGTCAGTTCGTCAGTAACACAGCCGCGATGGCCCACATGAAACTCATTCACAAGGATATAGAAGCCCCTCTCTTCAGTTGCTCTATATGCAAGTTGGAGACCAATTTGATGGATAATCTGGTCCGACACCTGTTCACCCATCCTGAGAGTCTCAGGTACAAGTGCCGAATGTGCTTTGAGAAGTTCCCAACATCTATGAAAAGATATGGCCATGAATACAAAATGCACTATAACGAACGCAAGCAGTGTCCACACTGCGTGCAAAAAGTGTCGCCAATCAACTTCGAGAACCATATCGCCTTGCATAGGggtGACAAGCATTACACTTGTGAGACGTGTGACCAGTCGTTTGTGGATTATCAGAAGTGGAAAAGTCATACGGAAAAACACAAACGGAGAGGTGGAGAGATGGAAATCAGCTTCTCTTGCAGGCACTGCGGGCAGACCTTTACAAATGGAAATCACCGACGTTGGCATGAGAATCTGCACACCAAACCAAAGGTTTACCAATGTCCCGATTGTGACTTTGCGTGCACCAACAAGAAGACGGCACAGAAGCACAGACGGGAAAACCAACATGCTAAACATATATTGCAGAAGAGAAATGTGGAAGATCCGGAGTCTCAGATGGAGGAGCTATTAGAAGAGGAAGTACAACCTGGAGCTGTTGAGACTATGCAGGAATTTGGCAAAGCTCAgAGAATTGATATTCTTGATCGGATGAACATAGCCTCCTATCCCTATCCATCCAAGATCCCAGCAAGATTGAATTCAATCCTTATCTGCTCTTTGCATTTTCCTGATTCTGCATTCCAGTATCGTAGAAAAATGCCCAACGGTTCGATTGAGGCTCAAGGTTCATTTCAACAGTGCTTGATCAAAGAGTTCATCGAAGAACAAAAAGCAAGGGGCAGCTTGTCTCCAAGGATTGAGCATAGCTATTCACAACCTGATCCCTGCATTATTGTTCCTCACAGAGCAACTCGAGATGAAGTAGAACTGGTTCCACTAATTCCAATCAGAAAAATCTCACCAGGGGTGAACATGCTGGATCTAGAGGAGCCTGGTCAAAACGAAAAATTGTTTCCTCCGCATATGTTGACCAGAGAAGAATTTTTGGCTCTCGAGGGAAATTCCAAGTCTCCTTCATCTgaggaggaagaggaggaTCAGCAACAGGAGGAGGCTGGCTCACTCTCTACTGTTGAGGAACTGGAGGAAGAGCCGATCTATTTGTCTTCCGAGCCTGAGGCTTTTCTGAAGAAGGAGGGTTTCTGCCGGCTGTGCTCTAAGATTGAAGAACCACTGATTGGGATTTTTGATGAGTTGGGTTGCAACATTGGTCTTGCAGAGAAAATCAACAAAGTTCTGCCAATCATTgtttctGAATCAGACAATTTGCCTTTGAAAGTATGTGTTCAGTGCATTACCAATTTGGAATCTATCTACGAGATGTACAACCAAGTTGCTAAAGCTGACAGATGTTTGAGatctaaattcaaaataactgATGAAGATGAACCAGAAAATGTTGATGTGTTGAAAGCCATGATGGATGATATTGGAATAGAAGACAATGATCATGAACATGTAGATAGCATGGGCTTTACAGATGATGATGGTGCTCAAGACAACGATCTAGTGGACCATACGGATGAGGAAGCATCCATTAACAATGAAGCCCTGCATCAGGCCCTGGAGAAAGTGCTGGACCCCTCCTTCGAGGCCTCTTACTCGACACTTATCTGCTCAATGTGCAACATTAGCTTTACGAAGGATGACGAATACACTGAACACTTCCGAAAGAAACATCTTTCCAAGCTTCGTCGCTGCTCAATCTGCCAAGTTTACTACCGCAATAAAACACTCCTCAGGAATCACTGGCGACAATTACACATGAAAAGTGTAAAGACGGCGGTGCCAGCAcccaagaaaaagaagaagaaaataactaaaaaatccCACAAATGCAATCGGTGTAACGCTACCTTTTACGGCAAGATACCGTTCAAGAGACATATGTTAGAGGAGCACCGAAAAACACTCAAGTTCCTAAAGTCTTTGGAAGAGCCAACTGTCAAGTGTGACTTCTGTGATGAGATGTTCATGAATTCTGGGTTGAAGGAAAATCACATGGAGAATGTGCATTTGCAGTACAAACCATACAAATGCAGGTTCTGTCCAAAGGTATTTCGACGGAAACTCAACAGGAACTATCACGAGAACACACATGATTCAAAAAAGGCACTTCTGTGCCCTACTTGTGGAGGTCTCTTTGGCTCAAAACTAATCCTTGCCGCCCATATGAGAACCCACTTGGAACCATTGACATGCCAAGTTTGTTCCAAGAAAATACCCCCAGACAGGATGAAAGCACACATGTTGGGTCACACAGGTGATCGCAACTTTCCGTGTTCCGAGTGCCAGGTCAAGTTTCCTACTAAACAGTCCCTGCAGCAACACATGCAGGCGCACTTGGACGAGCGGTTTGCATGCAATTTGTGTGCTTACGTGGCCAAACGCAAGTCCCTCATTCACACGCACTTCCGACAAAAACATGCCTTTGAATTGGGGTCCGGCTTATTCCACTGCGCCATTGACGGCTGTGACGCTCAATTCAAAAGTAATGCCTTGTTCTACCTTCATGTTGTCAGTATCCACCAAGCTTGCAGCCTCCTAAAGGATGATCTCGAGGATGGAGTTGACAGCTTCTATTGCaagtaCTGCGACAGCCGGTTTGACTCTCCACTGATTGCAATAAGCCACATGAGGCGCACACACAAAGATGTAAAAACACCAATCTACACCTGCTCTGTTTGCAATATGGAGACCACTTCAGTCTACAAACTGGTCAGCCACCTTTTCACCCATCCCGAGAGCCTCAGGTACAAGTGTCGAATGTGCCTCGAGAAGTTCCCATCGTCCCGCAGCAGATCTACCCACGAGTACAAAGAACATTACGAGAATCGCAGGCAGTGTCCCTACTGCGATCAAAGAGTGCCTCACATCAACTTTGAGAACCATGTTGCCTTACACACTGCtggttcTGGTGCTGGTGAACAGTACACTTGCGAGGTTTGTGACGAATTGTTTGTGGAACAGAGCAAATGGAAAAACCACATGGATATGCACATGCTAGCCAAAGAAAAAGTCGGAACTATTGGTGGCGAAAATTTCCCTTGCAGGTTTTGCGGAAAAGCCTTTGACAGTGGATACAGGCGACGTTTCCATGAGAACGTGCACACCAAACCAAAGTATTTCAAATGCCCCGACTGTGACTTTACGTGCCTCAACATACAGACTGCCAGGAAACACAAAAGGGAAACCCAGCATGCCAAACACATGGTGCATGAGAGAAATGCAGAAGATTTGGAAACCGAAATTGGAGAGATTTTAAAAGAGGcagaggaagaagaagttaAAATGCAGGAAGTTGACGAAAATCAGTATTCCTACATATTCACAATATCATAG
- Protein Sequence
- MEKFEEKKCHYFRCVTNQYKEDDWEKNEVSLLSIPIKMRREIFDRMNIFSYPIRKIPTMNKIRICSLHFPESAFLYRCKLLHGTSHKLKDDAVCYDWKDSCSKEEIEEIEARSSFRKGDDIEKFIKKQRADFVRGCLAPRIEHGYSQRNPFVKVPRDVVRDEIELVPLIATSIIVPGVNLKEARRETKEIFVRNQLIKPRELEQRNSNPLHMLTREEILALEVRNSSPLPSDEEEEEECQQKDSNPVDDEPIPVISSMPLNKERVCRLCSKVELPLIGIFEDSGCDIQLSKKINDVLPIQVSESDDLPLKVCIKCINAVESIYHLYKIVAKADKYLRFKFHLPEQPKAREKVDVLKNIMEEVGIDDDDQDDAGRMDHEDADSIGCGDTGNMGFPDDDGVQDDNQGDQMEEDEETTINKEALRQALEKVLDPTFEATYPTLVCSMCNISLAGCDEYLAHFKQRHSRKLFCCPICQVFFSNQLVFRAHWGQLHPTSKQKPTALRIRRKRLSRKLPKVLTCYRCKQCDNCFYDKKLFTKHVLAEQKEALKFLESLEKPNFKCDYCDEMFMTERKKENHMEKLHPQYKTHKCSLCPRVFRLRSSKRHHEDTHVSANAVLCPKCGKLFGSKPFLNAHLRTHMEPVPCRVCSKEFAPDRMKLHMMRHKGERNFQCPECKITFPSAGSLKQHRQVHEDMRYSCDLCGYMTKRKFLMTTHLRRTHVTEIGHGFFRCTIGGCDAEFSNNSKFYDHALNVHKTGILLQNNLEDGVDSFYCKYCNSQFVSNTAAMAHMKLIHKDIEAPLFSCSICKLETNLMDNLVRHLFTHPESLRYKCRMCFEKFPTSMKRYGHEYKMHYNERKQCPHCVQKVSPINFENHIALHRGDKHYTCETCDQSFVDYQKWKSHTEKHKRRGGEMEISFSCRHCGQTFTNGNHRRWHENLHTKPKVYQCPDCDFACTNKKTAQKHRRENQHAKHILQKRNVEDPESQMEELLEEEVQPGAVETMQEFGKAQRIDILDRMNIASYPYPSKIPARLNSILICSLHFPDSAFQYRRKMPNGSIEAQGSFQQCLIKEFIEEQKARGSLSPRIEHSYSQPDPCIIVPHRATRDEVELVPLIPIRKISPGVNMLDLEEPGQNEKLFPPHMLTREEFLALEGNSKSPSSEEEEEDQQQEEAGSLSTVEELEEEPIYLSSEPEAFLKKEGFCRLCSKIEEPLIGIFDELGCNIGLAEKINKVLPIIVSESDNLPLKVCVQCITNLESIYEMYNQVAKADRCLRSKFKITDEDEPENVDVLKAMMDDIGIEDNDHEHVDSMGFTDDDGAQDNDLVDHTDEEASINNEALHQALEKVLDPSFEASYSTLICSMCNISFTKDDEYTEHFRKKHLSKLRRCSICQVYYRNKTLLRNHWRQLHMKSVKTAVPAPKKKKKKITKKSHKCNRCNATFYGKIPFKRHMLEEHRKTLKFLKSLEEPTVKCDFCDEMFMNSGLKENHMENVHLQYKPYKCRFCPKVFRRKLNRNYHENTHDSKKALLCPTCGGLFGSKLILAAHMRTHLEPLTCQVCSKKIPPDRMKAHMLGHTGDRNFPCSECQVKFPTKQSLQQHMQAHLDERFACNLCAYVAKRKSLIHTHFRQKHAFELGSGLFHCAIDGCDAQFKSNALFYLHVVSIHQACSLLKDDLEDGVDSFYCKYCDSRFDSPLIAISHMRRTHKDVKTPIYTCSVCNMETTSVYKLVSHLFTHPESLRYKCRMCLEKFPSSRSRSTHEYKEHYENRRQCPYCDQRVPHINFENHVALHTAGSGAGEQYTCEVCDELFVEQSKWKNHMDMHMLAKEKVGTIGGENFPCRFCGKAFDSGYRRRFHENVHTKPKYFKCPDCDFTCLNIQTARKHKRETQHAKHMVHERNAEDLETEIGEILKEAEEEEVKMQEVDENQYSYIFTIS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -