Basic Information

Insect: Neocloeon triangulifer
Gene Symbol: Prdm14_2
Assembly: GCA_031216515.1
Location: JASKYO010000007.1:4477224-4480827[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.0024 0.14 12.6 1.6 1 23 416 439 416 439 0.96

2 11 0.00085 0.05 13.9 0.4 2 22 445 465 444 468 0.90

3 11 2.2e-06 0.00013 22.1 4.0 1 23 476 498 476 498 0.97

4 11 6.8e-07 4e-05 23.7 2.8 1 23 505 527 505 527 0.99

5 11 4e-05 0.0024 18.1 4.3 1 23 533 555 533 555 0.99

6 11 6.2e-05 0.0037 17.5 0.2 2 23 563 583 562 583 0.96

7 11 8.8e-05 0.0052 17.0 0.3 2 23 588 610 587 610 0.95

8 11 4e-05 0.0024 18.1 0.9 1 23 616 639 616 639 0.94

9 11 0.048 2.9 8.4 5.2 2 21 648 667 647 669 0.93

10 11 6.6e-05 0.0039 17.4 2.0 3 23 677 697 677 697 0.99

11 11 0.18 10 6.7 6.0 1 23 703 726 703 726 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.0024	0.14	12.6	1.6	1	23	416	439	416	439	0.96
2	11	0.00085	0.05	13.9	0.4	2	22	445	465	444	468	0.90
3	11	2.2e-06	0.00013	22.1	4.0	1	23	476	498	476	498	0.97
4	11	6.8e-07	4e-05	23.7	2.8	1	23	505	527	505	527	0.99
5	11	4e-05	0.0024	18.1	4.3	1	23	533	555	533	555	0.99
6	11	6.2e-05	0.0037	17.5	0.2	2	23	563	583	562	583	0.96
7	11	8.8e-05	0.0052	17.0	0.3	2	23	588	610	587	610	0.95
8	11	4e-05	0.0024	18.1	0.9	1	23	616	639	616	639	0.94
9	11	0.048	2.9	8.4	5.2	2	21	648	667	647	669	0.93
10	11	6.6e-05	0.0039	17.4	2.0	3	23	677	697	677	697	0.99
11	11	0.18	10	6.7	6.0	1	23	703	726	703	726	0.95

Sequence Information

Coding Sequence: aTGGACTTGTCCGACGTGCTCCGGTGCGACCCGCAGTCCGTCGACCCCTTTTACGTGAGCCAGGAGAATTTCTTCGACCACCTTTTCTGCGTCCTGCGCCGCCTGGAGATCTTCTTTGACTCGTTCTTGGTGCTCAACAACCACGAAATCGTGTCGTCGAACCACTTTGTCCTGTCGGCGCTGAGCAAGGTGGCGCAGGCGTTGCCCAAGGGTCGCCGGACGGGCTCGTACTTTGTGGTGCGCGACGCCGAGTCGTGGACCGTGCGCTGGCTCGTCGACTACTTTTACTCGGGCAAACTCACGCTGCCCCGCAACACTTTCGAGAGCATGAACAAGGTCTTGGCCAGCCTCGAGGTGGAGCTGCTCGGCGACTTCTTCGAGTCCGAGGAACTGCTGCACTTTTCCATGAACCAGCAGCAAAAGTGCGAGGTGCTGAACACAATTTGGGCCTCCAGACACAAAACGTACGACGTGAAAATCATCACGAGGGATGAAAATGAGGTGTTTGCGCACTGGGCCATTCTGGCTGCTTCCAGTGAGGAGCTTTACACTTTATTCCAGGCGCCGCTGTCAGTAAGGCCGAGCCTGGTGGCCCTCCTGGAGTTTGAAGCCGCAGACGTGGAGCTCCTTTTGCAATTCTGCTACAAGGGCGAAGTGCAAATCCCGAGGGCGCGCGCCACCAACCTTTGCCGGCTGGCCAAGATGTTTGGCATCAAAGATCTGTTCAACACCATCGCCGAACTCGGCTACCACCGAGAGCGGCAACCGGTCGTCAAACAAGGAACGACGCGACTTTCCTGCTACGAGCACAAGGACACTTCAAAAAGACTGCTTTTTAAGTCGCTCTTCGACAGAGAAACTCTCTCGGATCTGCAACTCATTAGCAACGATCACACTTTCaagGTCCACAGTGCAATACTCAGCGTCAGTCCGTACTTCCAGCCAATTTTCAATCAGCCCGATTGGCGTCACTGCCTGATTTTCCTGTCAAGTTTTGCCCTCGAATCAGTCCAAGCTTTCGTCGATCTCGTCTACTACGGAGAGGTGATTTACCAGGGTGGAGTTCAGGACTTCATCTCCGTGATGGAGGGTCTCATCGACTTTACCCTTCTGCCGATAAACTCTGTCGAAAATTTGGAGCCGCCTATCAACACTTTGGAGAAAGTTCCTCAGCCAAAAGCAAACTCGGAACCTCCTGCTTTGGCGCCAGTTGACGTAACCCACGAAAGTTCCAAGCTGCTCACCTACCAGTGCGAATTTTGCCCGAACGTTTTCTACAGCAGGAAGCGCCTCAAGAATCACCTGAGCAACGACCACCCACTGTCCAAACTGAAATGTGAACAGTGCGGATTACTTTTCGACACCCAGACTGACTTGAAAACCCACTTGAAAGAGGCCAAGCATCGAGCCGGCAGCCTCAACCCTTTCTTTTGTCCCACCTGCGGGAAGTCCTTTTCACTTTCTTGCTCTCTCCGGAAGCACATGAGACTGCACGATTCGAGTCTGCCCTTGTTCGAATGTGATATTTGCCAGAGGACCTGCTCACGAAAAGACTATTTGGAGGAGCACATGAGAACTCACACTGGCAAGAAGCCCTACAAATGCTCATTTTGTGGCAAAagGTTTGTTGGGAAGACGGGACTGAATCATCACAAGAAAACGCACGGTCCACCGAGAAAGGAGTCGGTCTGCGAGGTTTGCGGGAAGGAATTCACAAGGAAGGCCCTTTGGACGCACATGAAAATACACAACAAGCAACTCCGGTGTTCCGAGTGCGGACAGCTCTTCGCCACCAGTGGAACCTTGAAGAATCACATAGCACGGAAGCACTTCAACACAAAGCAGCACATCTGCGACATTTGCCAGAGGGCCTTCAGCGTCAAGGGAGAGTTGAAGAGACACAAGAAGCTGGTCCATGAAGATGTCAACAAGGAGCAACTTGAATGCAAACAGTgccttaaaaaattcttccgCAGCAGTTCATTGaaATACCATGAAAGGTGCCACTCGGAGAACCCTTCGAATGGTTGTCACTTGTGCCCTAAAACATTTTCCAGCAGCAAAGCCCTCAGCGAGCACCTTCAGAGCCACGCTTCGGACAAGCCTTACTTCTGCAGTCAGTGCAACGCGAATTTCCGCTGCAAGAGTTCCCTCAACAGACACAGCAACAAAAAGCACAGGGATAAGAAGCCTTCCCAGTCTGAGCAGCAACACATTTCGGACCAACTGTTTGTAGCAGAGGAACAACAGCCCATCTCAGTTGCACTCTCTGACCAGCAACAAtttaacattcaaatttttattccgtcCAGTGACCAGCCATAG
Protein Sequence: MDLSDVLRCDPQSVDPFYVSQENFFDHLFCVLRRLEIFFDSFLVLNNHEIVSSNHFVLSALSKVAQALPKGRRTGSYFVVRDAESWTVRWLVDYFYSGKLTLPRNTFESMNKVLASLEVELLGDFFESEELLHFSMNQQQKCEVLNTIWASRHKTYDVKIITRDENEVFAHWAILAASSEELYTLFQAPLSVRPSLVALLEFEAADVELLLQFCYKGEVQIPRARATNLCRLAKMFGIKDLFNTIAELGYHRERQPVVKQGTTRLSCYEHKDTSKRLLFKSLFDRETLSDLQLISNDHTFKVHSAILSVSPYFQPIFNQPDWRHCLIFLSSFALESVQAFVDLVYYGEVIYQGGVQDFISVMEGLIDFTLLPINSVENLEPPINTLEKVPQPKANSEPPALAPVDVTHESSKLLTYQCEFCPNVFYSRKRLKNHLSNDHPLSKLKCEQCGLLFDTQTDLKTHLKEAKHRAGSLNPFFCPTCGKSFSLSCSLRKHMRLHDSSLPLFECDICQRTCSRKDYLEEHMRTHTGKKPYKCSFCGKRFVGKTGLNHHKKTHGPPRKESVCEVCGKEFTRKALWTHMKIHNKQLRCSECGQLFATSGTLKNHIARKHFNTKQHICDICQRAFSVKGELKRHKKLVHEDVNKEQLECKQCLKKFFRSSSLKYHERCHSENPSNGCHLCPKTFSSSKALSEHLQSHASDKPYFCSQCNANFRCKSSLNRHSNKKHRDKKPSQSEQQHISDQLFVAEEQQPISVALSDQQQFNIQIFIPSSDQP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01046363;
90% Identity: iTF_01046363;
80% Identity: iTF_01046363;