Ntri001101.1
Basic Information
- Insect
- Neocloeon triangulifer
- Gene Symbol
- HIVEP1
- Assembly
- GCA_031216515.1
- Location
- JASKYO010000001.1:10944905-10960496[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 0.00035 0.021 15.2 0.3 1 23 107 129 107 129 0.98 2 11 0.041 2.4 8.7 3.7 1 21 135 155 135 159 0.87 3 11 0.00026 0.016 15.5 0.2 1 21 359 379 359 380 0.96 4 11 1.4e-06 8.2e-05 22.7 1.6 1 23 884 906 884 906 0.99 5 11 8.7e-06 0.00051 20.2 5.2 1 23 912 936 912 936 0.92 6 11 5.8e-06 0.00034 20.8 0.2 2 23 1298 1319 1297 1319 0.97 7 11 0.00064 0.038 14.3 1.8 1 23 1325 1349 1325 1349 0.92 8 11 0.001 0.06 13.7 2.7 1 23 1370 1394 1370 1394 0.93 9 11 0.0002 0.012 16.0 0.1 1 23 1520 1543 1520 1543 0.96 10 11 0.0029 0.17 12.3 1.4 1 23 1570 1592 1570 1592 0.97 11 11 7.3e-05 0.0043 17.3 1.2 1 23 1598 1620 1598 1620 0.96
Sequence Information
- Coding Sequence
- ATGTCGGCCCACTTGCCCGAGTCTGCACCTGGTCTACCACCGAGCCCCCCTGAAGCCCCCGACGCCCTCCTTTGGTCGCCAAACAACGGCAGCGATTCGCAGTCGCCGCGTGGCCCCGACGTCACCCTGGACCATCAGATGCCTCCTCAGGGTCCGCCTTCGCACCCAGgTCCGAGCGCAGAGTCTTCGGCGGCGTCGAACGACTCGTCCGACCTGCGGTACCGGCACAAGAAGTTCCAGAAGATGGCCTTGGCGTCGCCCTCGCCGCCCCCGGCAGCCGCCGCAGTCTCCGAGGGCCCCGTGAACGGGTCCGGCCGGTACGTGTGTCCGTACTGCCAGATGGCGTGCGCCAAGCCCAGCGTGCTGCAAAAGCACGTCCGCGCGCACACCAACGAGCGGCCCTACCCTTGCAGACCTTGCGGATTCGCGTTCAAGACCAAGAGCAACCTGTACAAGCACTGCCGCTCGCGCACCCACGCCATCAAGGCGGGCGAACCCGAGGGCATGGACGAGGAGACGGACGAGCTGCTCGACTCGGACGACGAACCCAACCCCAGCAGGCCGTACAAGCCCAAGTTCCAGGGCCAGTGTCCGCCCGGCAGCCCTGAGTTCCTCCAGAGGCACATCAGCAAGATAATCAGCGAGAACCAGGCCATTGTGGAGACCGTCGACCCCCTGTGGTCCAGGCGCTACCACAGAAACCTTTCCAGTCCTGCCACTGAACAAAAGACTGCGGGgAGGAGTGCTGAAAGTTCAAAAGCGTCGAGACTGGCCCACGCACTGACCCGGCCCAAGGAGGAGGGTTCGGAGCCGCTCAACCTGAGCGTCAGCAGCCCCCAGAGGCGGCGCAGCGACGGAGGCGGCTCCAGCAACGGCTTCCTCGTCCTCTCCCCGCCCTCCAAGATTGCACGTCTGGCCATGGACAACCATCCGCAGAACCCCGAAGGCTCCATCATCAAGGATCTGCTGCTCAAGGCTCGGCAAGGCGCCGACATGGCCGAACTGCTCAGCAGCGAAGTCAACCCTGCCCTTTTCCTCGAGGCCGCCGCAGCCTCCTCTGACTCTTCCCCCGCCTACGTTTGTGATTTGTGCAGGATCAGCTACAGGAACTCTGAGAATCTTGAGATTCACCAGCGCTACTACTGCAAAGGCCCGCAGGAGTCGGCGAAGAAAAACAGCCTCTTGCAGCACGAGGCTGCCAAACTGGCCGCTGCACTGGAGCTGGCCGCCCTGGCCACCCCTCCGCCCTTTCCCTCGCCGGGACCACTGCTGGGCTCCACGCCTTTGGTCGGAGGCTACAACGACGCGCCGGCCTCCAAAAGGCAACGACTGTCGAGTGAAGAGAGGCCGCCTTCGACTGCTAGCCTTCGTTCACTAGAGGAACTCTCTCGCTCTCCCAGACCTATGCAGATGTTTGGAGGAAAAGTGCACATAAATGATGGTCACGAACCAAAAACCATGATCATCGACCCCTGCAGACCTCCAGCCGGAACGTCCTTACTGCCCGAGCAGCAGCCCAACTCGAGTGGCCGGAGTTCTCCAACGAGCATCACCATATCAAGGTGTAACCTGAACTCAGGTGGGACCATCGTACAAATGATCGCCTCCACGTCTCAGTCGTCATCCTCGAACCCGGCCAACGCCCCCCTTGTGCCTGACCAGCAGCTTTTGGCGGCAGTGGCGCGGCCTATCGTGCCCAAAATCACCGCCCCCAGTCTGGCGCCATCCCTGCAGACCCCCTACCTGGCATACAACCCCCTCACACTGCCATCCGTCCCCACCCCGACGAGCAGACGAACCTCCTCGGACGCTGGGGTTGTCACGATTGTGCACGGCGGCCGGGAAATTCCTTACGTGCCAGGCATGCCGGGGCCGCAAAGTCTGACCGAGTCGCGACCTCTCGACCTTGTGTGCGGTCCTCCGCCGGCCAAGCCAGACATTCCTCTCAAACCCACGCAGTCGACGCCGCCCCCGCTGCAACCCATCAAGAGCCATCCACCCCGATCGCCGCCCCCCGCCGACAGTCCGTCCGAGGAGGGACCTCCCAAGCCCAAGTTCCTGCGGCCCACCTCGCTGCCCCTCAAGCCGGGCACCTTCGCGCCCAAGCGACCCCTGCTCACCTCGCTGGCAGGCACGACCCTGGTGAGCCCCGAGACGCCCCGGCCTCGCAAGTCCTACGGCCAGTTGTACCTGAACGGCCACGCGTACACGTACCTGGGGCTCAAGTGCTCCACCCGGGTGTTCTACTGCTGCCTCACCCAGCCGCAGCCCATGTACGTGCCCCAGAGCACCGACCCCAAGCTCTCCATGTACTCCAACTGGAGGGTGCTGTCCCCGTCGGCGGACCCGCCCGAGATGGCGCCGGCGCAGGCCATGGCGCTCTACGACTCGAGGCACAGGCCAAACAAGTACTCCATCGCCAGCACCAGGCCCCAGTCGCTCGTGGTCACGCACTCCTCCCAGTGGGACAGCGGCCGTAAAACTGACAGCCCCGATTCCAACTCATCAAAGTCCAGTAGTGATGCTAAGCAAACTAAAGAGcaaATGTCTCCGAATGGAGAGCCCCTGCCAAAGAGGGTGAAAATTTTTGCCGGCGGATTCGAGTCCAACGAAGAGTACACTTATGTGAGAGGCAGGGGCCGTGGGAAGTACGTTTGTGAAGAGTGCGGCATTAGGTGTAAAAAACCCTCTATGCTCAAGAAACATATCAGGACACACACAGATGTGCGACCTTTCACCTGTAAACACTGCAGCTTCAGTTTTAAGACTAAAGGCAATCTGACCAAGCATATGAAGTCCAAGGCACACTACAAAAAGTGCATGGAATTAGGAATCTTACCTGTGCCAACCGCAGTGGAGGACAGCAACATTGATGAGGAACTGCTGTTGAGACAGCAAGCACTTAGAGTAGAACGAGGTGATGGCCCTGATTCAGAGTCTGATGAAGAAGACGATGAGGACGAGGATGATGATGAAGACGACGACGAAGATTCTATGCAAATAAGTGACATTGATGCTGGGCAGAGAGAGGCCGCGTGCAGTCTCTTGTCCCTGGCCGAGCAGCATGTGGGTCTGATCCCTATTTCGGCCCGACCCTTCACGTACCCCTATTCGAGTGGCCCCACTTGTACAACAACCACAATCACCACAGCAGCTCGCACGCCGACAATTTCATCGGTCAGTGCAcacagcgagagagaaaaggtgTCCAGGAACACTCGCTTGGTCATGCCGGAGCAAAAGGGTGCGGCCGCGCCTTCCGGAGGGGGCGACCGCTACTACTTCCCCTCCAAAAGGGATGAATCCGCCTCAGGGTCAACCCCGGAGGCCACGCCCCCACCCATGGACTTGAGCAGACCCGCTCCTGTGACTCCAGTGCCAGACTCGGCAGCCCTATTGGCCGCCCTTTGCAGCACCGTGGAGCGCCTTCCTCAGGGTGGGCGTCAGGGTCAGGCCCCACCTGACATGCTGCACGCCTACCTGACCGAAAAGGCGCTGCACGACGTCAGGATCAAGCAGCACCAGGTTCACCGGTGGCGCGGCCTCCCTCCCGACTCGAACGCCGCAACCCCAAACACCCCCGTGGCCTCCCCCGCCCCCTCGCTACTCACCCCGACCCTGGCGTGCAACATGTCTGCCCTGCTGCTCAATTCGCCCATGAAGGAGGTCAGTTCTGAGTCTCATCCGCCTTCGGCACCTCCGAAACTGGACAACTTGAACAAAGCCGCGGCCATTGGCCAACAACACGTGGCCGCCGCGGCGGCCGCCATTGCGGCAGCAGGAGGTTCACCGCCGCACTCTGCAAGTCCGAGCAAGCCCAAGGCAGAGTTCATGCCACCAGCAAGTGGCCCTGGTAGCAACTATGGcagTTTAACTGAAGACGGCAAGAGCCAGTGTGCAATCTGCAATAAAGTGTTCTCAAAACCGAGTCAGCTTCGCCTTCATGTCAACATCCACTACTTCGAGCGGCCATTCAGGTGTGAGTCTTGTGCAGTGTCCTTCCGCACCAAAGGTCATCTCCAGAAGCATGAACGATCCGTCAGCCACCAGAACAAgGTGAGCATGAACTCCACATTCGGCATGCCCACCACTGACAACCCCCGACCCTTCAAATGCGAGGACTGCAAAATCGCCTTTCGAATTCACGGCCACCTCGCCAAGCACCTGCGCTCCAAGATGCACATCATGAAACTTGAGTGTCTGGGAAAACTGCCCTTCGGAACCTACGCCGAGATGGAGCGGTCCGGAATCAACCTGAATGAAATTGACACGACGGACTGCGACAATTCCCTTGAAAGTTTACAAATCTTGGCTCAGAAAATCTACGAGAAGGACCCGTCCAAGCTGCAGCCGTGGGACCGCCGACGCACCACAAGCGAATCTTCAGAGGACATGACCGAAGATCCAGGAGAAATGTACATGGGACACGGCCAAGGTCACCACATGCAAGCAGGTCCCTCTGCCATGGATGACGGCATGAAACACAGACTGATGTCAGGCTCTGATTACGACGACGGTTCCGAAGGAGAACCTgaTGTTGGTCATGAGGTGCTGAGCTACAAGTGCCCTATTTGTGAACAGGCCTTCCCTTCAGTTAACTCCCTCAAGGTGCACATCTTTGTGGACCACAGCAATGCCCCTAGCGAGGCGCCGATGGAGCAGCCGGACAAGTTTAGAGGCAGAATCGATAGCAGCACTAGTCAGGTGTTCAAATGTGACCTTTGTGGCCTCCATCTCCCGAGCCAGGACTCCCTCCACAAGcacGTCGCATCACACTCTCAACCCCGGCCTTTCGTGTGCAAGTATTGCGACGCTGGTTTTACGTCCAAGACTCACCTGCTGCAGCACCTGGCACTTCACCAGGCGGGGGCGGCTTTCAACGGCCCCCTGGCGGCCCCCAATTAG
- Protein Sequence
- MSAHLPESAPGLPPSPPEAPDALLWSPNNGSDSQSPRGPDVTLDHQMPPQGPPSHPGPSAESSAASNDSSDLRYRHKKFQKMALASPSPPPAAAAVSEGPVNGSGRYVCPYCQMACAKPSVLQKHVRAHTNERPYPCRPCGFAFKTKSNLYKHCRSRTHAIKAGEPEGMDEETDELLDSDDEPNPSRPYKPKFQGQCPPGSPEFLQRHISKIISENQAIVETVDPLWSRRYHRNLSSPATEQKTAGRSAESSKASRLAHALTRPKEEGSEPLNLSVSSPQRRRSDGGGSSNGFLVLSPPSKIARLAMDNHPQNPEGSIIKDLLLKARQGADMAELLSSEVNPALFLEAAAASSDSSPAYVCDLCRISYRNSENLEIHQRYYCKGPQESAKKNSLLQHEAAKLAAALELAALATPPPFPSPGPLLGSTPLVGGYNDAPASKRQRLSSEERPPSTASLRSLEELSRSPRPMQMFGGKVHINDGHEPKTMIIDPCRPPAGTSLLPEQQPNSSGRSSPTSITISRCNLNSGGTIVQMIASTSQSSSSNPANAPLVPDQQLLAAVARPIVPKITAPSLAPSLQTPYLAYNPLTLPSVPTPTSRRTSSDAGVVTIVHGGREIPYVPGMPGPQSLTESRPLDLVCGPPPAKPDIPLKPTQSTPPPLQPIKSHPPRSPPPADSPSEEGPPKPKFLRPTSLPLKPGTFAPKRPLLTSLAGTTLVSPETPRPRKSYGQLYLNGHAYTYLGLKCSTRVFYCCLTQPQPMYVPQSTDPKLSMYSNWRVLSPSADPPEMAPAQAMALYDSRHRPNKYSIASTRPQSLVVTHSSQWDSGRKTDSPDSNSSKSSSDAKQTKEQMSPNGEPLPKRVKIFAGGFESNEEYTYVRGRGRGKYVCEECGIRCKKPSMLKKHIRTHTDVRPFTCKHCSFSFKTKGNLTKHMKSKAHYKKCMELGILPVPTAVEDSNIDEELLLRQQALRVERGDGPDSESDEEDDEDEDDDEDDDEDSMQISDIDAGQREAACSLLSLAEQHVGLIPISARPFTYPYSSGPTCTTTTITTAARTPTISSVSAHSEREKVSRNTRLVMPEQKGAAAPSGGGDRYYFPSKRDESASGSTPEATPPPMDLSRPAPVTPVPDSAALLAALCSTVERLPQGGRQGQAPPDMLHAYLTEKALHDVRIKQHQVHRWRGLPPDSNAATPNTPVASPAPSLLTPTLACNMSALLLNSPMKEVSSESHPPSAPPKLDNLNKAAAIGQQHVAAAAAAIAAAGGSPPHSASPSKPKAEFMPPASGPGSNYGSLTEDGKSQCAICNKVFSKPSQLRLHVNIHYFERPFRCESCAVSFRTKGHLQKHERSVSHQNKVSMNSTFGMPTTDNPRPFKCEDCKIAFRIHGHLAKHLRSKMHIMKLECLGKLPFGTYAEMERSGINLNEIDTTDCDNSLESLQILAQKIYEKDPSKLQPWDRRRTTSESSEDMTEDPGEMYMGHGQGHHMQAGPSAMDDGMKHRLMSGSDYDDGSEGEPDVGHEVLSYKCPICEQAFPSVNSLKVHIFVDHSNAPSEAPMEQPDKFRGRIDSSTSQVFKCDLCGLHLPSQDSLHKHVASHSQPRPFVCKYCDAGFTSKTHLLQHLALHQAGAAFNGPLAAPN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00344561;
- 90% Identity
- -
- 80% Identity
- -