Basic Information

Insect: Neocloeon triangulifer
Gene Symbol: -
Assembly: GCA_031216515.1
Location: JASKYO010000013.1:5210289-5217594[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 33 0.13 7.7 7.1 3.1 1 23 228 251 228 251 0.93

2 33 0.00036 0.021 15.1 0.3 2 23 266 287 266 287 0.97

3 33 0.00064 0.038 14.3 0.2 1 23 293 315 293 315 0.97

4 33 0.021 1.2 9.6 0.0 6 23 326 343 325 343 0.99

5 33 0.28 16 6.0 0.1 1 23 349 372 349 372 0.94

6 33 8.1e-05 0.0048 17.2 1.6 1 23 378 400 378 400 0.99

7 33 1.1e-05 0.00066 19.9 0.4 1 23 405 427 405 427 0.99

8 33 0.0016 0.097 13.0 0.4 2 23 434 455 433 455 0.93

9 33 1.1e-05 0.00064 19.9 0.5 1 23 461 483 461 483 0.98

10 33 1e-05 0.00059 20.0 3.0 1 23 489 511 489 511 0.98

11 33 3.5 2.1e+02 2.6 1.1 1 23 539 562 539 562 0.93

12 33 0.094 5.5 7.5 0.9 1 23 564 587 564 587 0.97

13 33 0.79 47 4.6 4.6 2 23 595 616 595 616 0.96

14 33 0.00074 0.044 14.1 0.3 1 23 622 644 622 644 0.98

15 33 0.034 2 8.9 2.8 3 23 690 711 688 711 0.91

16 33 0.0048 0.28 11.6 0.4 6 23 717 735 717 735 0.97

17 33 0.0036 0.21 12.0 2.6 1 23 740 763 740 763 0.94

18 33 0.26 15 6.1 0.3 1 20 768 787 768 789 0.89

19 33 0.04 2.4 8.7 0.1 2 23 805 826 804 826 0.94

20 33 0.4 24 5.5 0.5 2 23 882 902 881 902 0.96

21 33 1.4 84 3.8 0.5 1 23 907 929 907 929 0.94

22 33 4.3 2.5e+02 2.3 1.7 1 21 936 956 936 959 0.84

23 33 0.00076 0.045 14.1 1.8 2 23 999 1021 998 1021 0.96

24 33 3.1 1.8e+02 2.8 0.6 2 23 1029 1050 1028 1050 0.96

25 33 0.0051 0.3 11.5 1.6 2 23 1059 1081 1058 1081 0.96

26 33 0.027 1.6 9.2 0.5 2 23 1083 1105 1083 1105 0.97

27 33 0.014 0.81 10.2 2.7 2 23 1236 1258 1235 1258 0.93

28 33 0.0044 0.26 11.7 2.2 3 23 1261 1281 1260 1281 0.94

29 33 0.011 0.65 10.4 0.3 2 23 1285 1307 1284 1307 0.96

30 33 4 2.4e+02 2.4 2.2 2 23 1339 1359 1338 1359 0.93

31 33 0.029 1.7 9.1 3.3 1 23 1366 1388 1366 1388 0.98

32 33 0.082 4.8 7.7 0.1 1 23 1394 1417 1394 1417 0.92

33 33 0.52 31 5.2 0.0 2 19 1427 1444 1426 1446 0.88

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	33	0.13	7.7	7.1	3.1	1	23	228	251	228	251	0.93
2	33	0.00036	0.021	15.1	0.3	2	23	266	287	266	287	0.97
3	33	0.00064	0.038	14.3	0.2	1	23	293	315	293	315	0.97
4	33	0.021	1.2	9.6	0.0	6	23	326	343	325	343	0.99
5	33	0.28	16	6.0	0.1	1	23	349	372	349	372	0.94
6	33	8.1e-05	0.0048	17.2	1.6	1	23	378	400	378	400	0.99
7	33	1.1e-05	0.00066	19.9	0.4	1	23	405	427	405	427	0.99
8	33	0.0016	0.097	13.0	0.4	2	23	434	455	433	455	0.93
9	33	1.1e-05	0.00064	19.9	0.5	1	23	461	483	461	483	0.98
10	33	1e-05	0.00059	20.0	3.0	1	23	489	511	489	511	0.98
11	33	3.5	2.1e+02	2.6	1.1	1	23	539	562	539	562	0.93
12	33	0.094	5.5	7.5	0.9	1	23	564	587	564	587	0.97
13	33	0.79	47	4.6	4.6	2	23	595	616	595	616	0.96
14	33	0.00074	0.044	14.1	0.3	1	23	622	644	622	644	0.98
15	33	0.034	2	8.9	2.8	3	23	690	711	688	711	0.91
16	33	0.0048	0.28	11.6	0.4	6	23	717	735	717	735	0.97
17	33	0.0036	0.21	12.0	2.6	1	23	740	763	740	763	0.94
18	33	0.26	15	6.1	0.3	1	20	768	787	768	789	0.89
19	33	0.04	2.4	8.7	0.1	2	23	805	826	804	826	0.94
20	33	0.4	24	5.5	0.5	2	23	882	902	881	902	0.96
21	33	1.4	84	3.8	0.5	1	23	907	929	907	929	0.94
22	33	4.3	2.5e+02	2.3	1.7	1	21	936	956	936	959	0.84
23	33	0.00076	0.045	14.1	1.8	2	23	999	1021	998	1021	0.96
24	33	3.1	1.8e+02	2.8	0.6	2	23	1029	1050	1028	1050	0.96
25	33	0.0051	0.3	11.5	1.6	2	23	1059	1081	1058	1081	0.96
26	33	0.027	1.6	9.2	0.5	2	23	1083	1105	1083	1105	0.97
27	33	0.014	0.81	10.2	2.7	2	23	1236	1258	1235	1258	0.93
28	33	0.0044	0.26	11.7	2.2	3	23	1261	1281	1260	1281	0.94
29	33	0.011	0.65	10.4	0.3	2	23	1285	1307	1284	1307	0.96
30	33	4	2.4e+02	2.4	2.2	2	23	1339	1359	1338	1359	0.93
31	33	0.029	1.7	9.1	3.3	1	23	1366	1388	1366	1388	0.98
32	33	0.082	4.8	7.7	0.1	1	23	1394	1417	1394	1417	0.92
33	33	0.52	31	5.2	0.0	2	19	1427	1444	1426	1446	0.88

Sequence Information

Coding Sequence: ATGGCCGTGTCCACGAAAGTCGGCGATATGTGCCGCCTTTGCGGCACGGACACACTGAACATCGTTCGACATGCTATTTTCGAAGGTGAAGGGCTGACCAAGAAGTACGCCCTGAAGATTTCCGAGTGCCTTCCTCTACAGGTGACTGTAGAAGATCCTCTTCCTAAAAACATGTGTGGTGAATGCGCCTACAAACTAGACTTGATGAGTGACTTTAGAGACAAAGCTGTGAAGACTGAGGTTATGCTCGTATCCCTGGTGGAAGGAGTAAAACCCGAGGTATTTCCTATTTTAATgcttattATTCCAGATGATGATGATGGTATAGATCACGAAATAGACAATGATGATGACTTCCGCTCTGACACACCCGTCGAGCAAATAGAGCAGCAGACTGAACCCGAGATACAGATCAAAGAGGAAGAGGCGCCTCCACAGCCAGAAAAGAGGCCCAGTAGACGTGCTGCCGCCAAAAGGCCCATCAGAGAATCTGACGGCGAGGATGATGAGATTGAGGAAGAACCTCCCGCCAAGAAGCGCGGCCGCAAATCCAAGGAGATTGCCCCTGCTGCCACTACTGCCCCTGCTCCCACACCAGCTGCTAGCAGCGCACCCAAGGAGAACACAGGGGCCTATGTCGAAGTGGCCCAGACTGAGAAACAAATGTATTACAGGCCCGTATTTGAATGTTCCCACTGCCACCACATGACGGCCACCCTGGGCCAGATGCGCGCCCACGTAGCAAACCGCCACTTGCCTCGCACCGACGTGCCACCCCTGAACGGCTTTCGAGCGCAATGTGTTGAGTGTGGTCGCACCTTTGGCAGCGCCAAGAAACTTACAGACCACCTGGCCAGACACACTGGAGCTCGGCCCTTTGAGTGCAACCTATGTGACCGAGGGTTCAGCAGCCAGGGCAGACTTGACTCTCACCTCTTGCTGCACTCTGCAGTTTGGACACATGGGTGCATTGCCTGTGGGGCCGCTTTTGCCACGCCGGCCGATCTGGCAACCCACGAGAGGACCCATACGGGGGCCACGCCCTTTAACTGCCTCCTCTGCTCCGCCGCCTTTGGCACTCGAGACCTGTTGGCCGACCACAATGCCACCAACCACCCGGACGCTTCTCTCTTCACCTGTGGCAAATGCTCAAAGAGATTTGGGACTGCAGCCAAGTTCCGAGAGCACCTGCGAACCCACGCTGTTCGTCGGTACGAATGTGTGTACTGCGACGCCAGGTTCTCCACTCCCTCTCGGCTCAGGGCCCACACGCAGACCCACACTGGAGAGAAAGGGTTCCTCTGCGACGCCTGTGGAAAGCGATTCCCAAACAGGCGTGAACTCTCCCAGCACGAGACAATGCACACTGGAGAGAAGCAGTTCATCTGTGAGCACTGCGCCAAACCCTTTGCTCGGCGGGAAGGGCTGACTGTCCACCTAAGGACGCACACTGGCGAAAGGCCTTTTGTGTGCGCTGAGTGTGGCCACTCTTTCACTCAGCGCCACGCTCTGCAGACACATGAGCGCACTCACACTGGCGAGAGGCCCTTTCAGCCTCTGGCGGTGGTGGCACGACCTGACCCTGGTCCACATCCCGTGATTGGAGCGCCCCTGTACCAATGCCGCCACTGTGAGGACCTGTTTGAGACGCTTGGCGACACCCGACAGCACATCAGCCAGGAGCACAAATTCAAATGTCCCACTTGCTACTTCCGTGCAAGTACGGAGGAGGAGCTGGAGGAGCACTCTAAGAAAAAACACATGGACAAAGAAAACCTTCCTCGATGCTGCATATGTCAGCGGCTATGCACTGACAGGGACGCCTACAAACAGCACCTGCTGCTGCATGTTGGGTCGATGCCCTACGAGTGCCAATTCTgtgaaaaactttttgcagACAAGGGCCGTTTAGAAAATCATATCATCAGGCACAACACGCCGTCAACTCCCAAACGCAGAGGAAGACCTCCAAAAGGCTTCTTTTCCGAAAAGCAAATCTCGCCAAGTAAACCTTCCGTTGATCCCTtcagacaaataattttttatcggGGCGGATCAGCCCATGCGTGCATCGACTGCAACAAGAAGTTTCAAAAAAGGGAGGAATTGCGCGAACATAGGCGCTTGAAGCACCGATCCGAGTGTCCCTGTGGCAAAAAGTTCTCCAATGAGCAGCAGCTGCAGAGTCACAGAATAAAAGTTCATCCGGAGTGGATCCACCGATGCAGGCAGTGCACTGAGACGTTTAACACTCCGCTGCAGTTGGCCCATCACATGGATAACATTCATAAAGACAAGACGTACAAGTGTAGCAGATGCAACAAGGTGCTGAAAACAATGGTTGGCATGATTAGTCACAAGAGCAAGGGCTGCACTGTGAGGAAGCGAAATCCTGTTAACCCTAAGGGGCTGATTTGTGTCTATTGCAATGGAAAGTTTGCCGAACGCACTGCTCTGGAGAAGCACATAGAGGAGCACTTAAAACAAATAGAggaaaacaaggaaaaagtTGCCCAGATGAAATTGCTGGCCGAGTTGAGAGAGATTGAAGCCAGTGCACAGAAGATAAATACGGAGGAACCAATCGTGGATGAAGAGGCAAAGAaacgaaagaaaaatgaaacaaagaGGCTCAGCTTTGTCACCTGCGAATTGTGTGATAAAAATACTCCCCCTCACACGCTGGATGTGCACATGAAGCTCCACAAGGGCGGTAAATATGTTTGCGAGAAATGTAAATACGTCGCCATGTCTGAAGCAAAGATGAAGGAGCACACGTTCAGCCACAATGACATAACAGCTCCctttttctgcagtatttgCAAATTGAACTTCCGCATGATGCACTGGGCTGAAAAACACAAGGATGCATACCATGGTCTGAACGCCACAATTGAGATCCGCCCTCAAGTTCCTCAAGTACCTCCACCACAGGAACTAAGGGATAAAAGTTCTCGTACAAAGTCTACAAAGGCTTCAAGTAACACTAAAAAAAAGTGCTCCCTGTGCCCAGAATTATTCACAGACCACTCATTACTCAATCAGCACATGAAGGAACAACACGTAGACAAAAAGGGAACTCAAAAATGCTACCAGTGCAATGCCatatcagaaaattttcatgctttAGTGGTCCACGTAAAGCTGCACGGTGTGAACCTCAAGATCCCCAAGTCTTGCACCATTTGCTCTGCCGTCCTGAACAACTCGCACAGCTACAATCGCCACATGAATATGTTGCACCCCAAGTGCCGTTACTGTAATGAAAGATTGGCCAGTAGAGCATCACTGGCTTCTCACGTAAGCACAAAGCACCCTGGCATGCCAGACCCAGAAGCAGGGACCCAATCAAGAAAAAGCAGCACTGATCAAGGCTCGTCTAGTGAGCAGCCAAATGCTCCAGTTAATGGTGTGAAGGTCAAGCAGGAGTTGAAGCAAGAGGTGAGCAATGATGAAGTGGAAATTCCAACAGACACACAAACTCTCGCTGCTGATATTATGTCCCGTATGACGCCAGAAGAAATTACGAGAATCATTAGTGCTGTGAGCAGTCTTAGAGAATTGGAAACCAAAGAATTTCTGGCAGAGACGGTGAAAAATGAACCTGGTCCATCTAAGCCTGTTGCCGGCCCATCAAAGCCTGTAAACTTACAAATAACCGAACCCATGCGTATTgatcacaaaaaatattcaagtaaAAGTAACAAGTGCCACCTCTGCGAGGCAAAGTACAAAACCAAAGGGGAGCTTCGAAATCATAAGATAAATTTCCACAATTGCTGTCACCTGTGCGGAAAGCTATTTGAGACACAAGCTGCTCTGCAAAATCACGCGGACAACCATCCGGCTCTAAAGTGTCCGGTGTGTGAcaaattaacagaaaaaacTAGTGACATGCAAATACACATTAATCGTAGACACGGCGGGACGCCTGTTTGCGCGGTGTGCTTGGTCATCATGGACGAATTTATTGAGCTGGATTTGCATTACACGACGGAGCACCCTGCGATAAAGAAGTGTCCCATTTGCAAACACCGCATGTCACAAAGTAGCTTGAAGCCGCATATGGCCAAGCACAATCAAAGCACCAAGTCATTCTCTTGCAAAAGTTGCTCCAAAACCTTCTTACACAAAGTCAATCTTGATCAGCATGAGCGCATCCACACTGGCCTGACGCCATACTTATGTCCTTTGTGTCCAATGAGCTTTATGACTGGGACGAACATGGTTAACCACGTAAAGTTTGCGCACAACTTTGTTCCCAAAAGTACTGTTATTCCCTGTCCTTGGTGTAACTTGAAGTTCAGAAGTATTTCAGAGATTGGGAAGCATGTTGAAGCGAGTGAGGAGTGCCTAGCCCAGCGCAATAGCACTGAGCCGGTCGGAAAAGCCTCCACTAGCCGAAGTGAGGCACCACCTGCGAGACCAAGAAATGCACCTTCTACCAGCCAAGGCGAAGCACGACCCAAAAGAATCAGAAACAGAAAGAAGACCGCTCCTCCACCAAtagtgaaaattgaaaacacaaATAATGATCCGCCGGCTCAAAactaa
Protein Sequence: MAVSTKVGDMCRLCGTDTLNIVRHAIFEGEGLTKKYALKISECLPLQVTVEDPLPKNMCGECAYKLDLMSDFRDKAVKTEVMLVSLVEGVKPEVFPILMLIIPDDDDGIDHEIDNDDDFRSDTPVEQIEQQTEPEIQIKEEEAPPQPEKRPSRRAAAKRPIRESDGEDDEIEEEPPAKKRGRKSKEIAPAATTAPAPTPAASSAPKENTGAYVEVAQTEKQMYYRPVFECSHCHHMTATLGQMRAHVANRHLPRTDVPPLNGFRAQCVECGRTFGSAKKLTDHLARHTGARPFECNLCDRGFSSQGRLDSHLLLHSAVWTHGCIACGAAFATPADLATHERTHTGATPFNCLLCSAAFGTRDLLADHNATNHPDASLFTCGKCSKRFGTAAKFREHLRTHAVRRYECVYCDARFSTPSRLRAHTQTHTGEKGFLCDACGKRFPNRRELSQHETMHTGEKQFICEHCAKPFARREGLTVHLRTHTGERPFVCAECGHSFTQRHALQTHERTHTGERPFQPLAVVARPDPGPHPVIGAPLYQCRHCEDLFETLGDTRQHISQEHKFKCPTCYFRASTEEELEEHSKKKHMDKENLPRCCICQRLCTDRDAYKQHLLLHVGSMPYECQFCEKLFADKGRLENHIIRHNTPSTPKRRGRPPKGFFSEKQISPSKPSVDPFRQIIFYRGGSAHACIDCNKKFQKREELREHRRLKHRSECPCGKKFSNEQQLQSHRIKVHPEWIHRCRQCTETFNTPLQLAHHMDNIHKDKTYKCSRCNKVLKTMVGMISHKSKGCTVRKRNPVNPKGLICVYCNGKFAERTALEKHIEEHLKQIEENKEKVAQMKLLAELREIEASAQKINTEEPIVDEEAKKRKKNETKRLSFVTCELCDKNTPPHTLDVHMKLHKGGKYVCEKCKYVAMSEAKMKEHTFSHNDITAPFFCSICKLNFRMMHWAEKHKDAYHGLNATIEIRPQVPQVPPPQELRDKSSRTKSTKASSNTKKKCSLCPELFTDHSLLNQHMKEQHVDKKGTQKCYQCNAISENFHALVVHVKLHGVNLKIPKSCTICSAVLNNSHSYNRHMNMLHPKCRYCNERLASRASLASHVSTKHPGMPDPEAGTQSRKSSTDQGSSSEQPNAPVNGVKVKQELKQEVSNDEVEIPTDTQTLAADIMSRMTPEEITRIISAVSSLRELETKEFLAETVKNEPGPSKPVAGPSKPVNLQITEPMRIDHKKYSSKSNKCHLCEAKYKTKGELRNHKINFHNCCHLCGKLFETQAALQNHADNHPALKCPVCDKLTEKTSDMQIHINRRHGGTPVCAVCLVIMDEFIELDLHYTTEHPAIKKCPICKHRMSQSSLKPHMAKHNQSTKSFSCKSCSKTFLHKVNLDQHERIHTGLTPYLCPLCPMSFMTGTNMVNHVKFAHNFVPKSTVIPCPWCNLKFRSISEIGKHVEASEECLAQRNSTEPVGKASTSRSEAPPARPRNAPSTSQGEARPKRIRNRKKTAPPPIVKIENTNNDPPAQN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -