Ntri011032.1
Basic Information
- Insect
- Neocloeon triangulifer
- Gene Symbol
- bab1_3
- Assembly
- GCA_031216515.1
- Location
- JASKYO010000013.1:16225115-16227586[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.7e-14 2.4e-11 43.0 0.0 3 45 361 403 359 403 0.92
Sequence Information
- Coding Sequence
- ATGGGGAGTGCGTCGCAGCAATACTGCCTGCGCTGGAACAACCACCGCACCAACCTGCTGACGGTCTTCGACCAGCTGCTGCAGAGTGAGGCCTTCACCGACTGCACCCTGGCCTGTGAGGGTGCGACCATCAAGTGCCACAAGATGGTGCTGGCCGCCTGCTCCACCTATTTCCAGATGCTGTTCCTCGAGGTGGCCTGCTCGCACCCGGTCGTTGTCCTTAAGGACATTCGATACACCGACATGAAGGCCATCCTTGAGTACATGTACCGAGGCGAGGTCAACGTTGCGCAGGACCAGCTCGCCAGCCTTCTCAAGGTTGCCGAAGCCCTCAAGgtgAAAGGTTTGGTTGAAGACAACAGCCAGAATTTAGCAAGTAATGGAGAGCCTGCCGCCCCATCATCCCCACCCACAATCAGCACTTCGGCGAACATCAGCTCGCTGCCGCCGAACCTGTCGCCACCGCACTCAGCCGGCCTGCTGAACCCGTTCTCTAAGAACTACATGTACAGCAAGTCAATACTGGGaggcgcggcggcggccgcggctgCTGAAAGGGCGCGTCTGGGGTCGTTGCCCATGTGGGCAATGCCGGGCCTTCCACCGGGCATGCCCCCGCTGGCCAGCCACTCTCTCAGCAGCAGCTACGACTCGCCGCTGAAACGCAAGAAGCTGCAGAGTCTCCTCAACAACAGGGACACGCCCATCCTGCGCACCGTCCTTGGACAAAGTCTGCAGCAGCCGGCCACTGGCAGCTCTGCCTCGGCGTCGCCACCTGGCAGCAGTCAGTCCCCGGCCGCCGACTCCTCTCAGCAACCCGTCTCTTTAGTGTGCCATCCCGAACGAGCCCAGTCTAATGGATCTGCTCACAGCaggagtTACAAAGGAGAGCCTTCAATGGATGACGACCAGCATTCGTACTCGGACATAAACGTGGATGAAGAGATGAATGAGTCTGTGGGAAAAATGATGTTGCCTGGATCAACGCACCCGACTTACTCTGGGGACATGAAAGgAGGAATTGCGCCATACGTGCCAGCACAGAAGCCTGAATGGAAACGATACAAGCAGTACACACGCAATGACATCATGTCCGCCATCGATGCCGTCCGCAACGGGATGAGTGCCTTGCAGGCTGCGCGCAAATTTGGGGTCCCTTCACGCACGCTGTATGACAAGGTCAAGAAACTGGGCATCACCACGAGCCGGCCTTTCAAGCGGGGTAGCTTCCAGTTTGGAGGCGGCCTCAGCGCCAGCCAGGAAAACCTGAACCACTCTGGCGGAAACTTCTGCAGCCAATCAGACGCCGAGGAACAAGTTTCGTCCGACAACATCATGGGCAAGTCTGATGACGGCCGGGATGAAGCGACAGCCGCCAGCGTCCTCATCAGGGCGAGTCCGTGTCGAAGTCCGAGCCCCCCGGGACTTCAGGGCCACTTCATGAGCGGGGCCTCCGGCCACTTCCGGGCCAGCAGTAGTCCGAGCCCAACGGCCAGCAGCGGCCACAGCCACGACGAGGTTGAGGACCTGTCTGTGTCTGGAGGACGCAAATCTTCGCCACTGCCACCTGCGGTGACGCAGGTCGCCGTGCCCATCACGCCCTTGCACCCGCACATAGTGTCCCTCAAAGAGAGCACAATCGACGACTCATCGGCCGTGCGGACAACGACGGTCGGTGGTGGAGGCGACGCCGAGCACGACTGA
- Protein Sequence
- MGSASQQYCLRWNNHRTNLLTVFDQLLQSEAFTDCTLACEGATIKCHKMVLAACSTYFQMLFLEVACSHPVVVLKDIRYTDMKAILEYMYRGEVNVAQDQLASLLKVAEALKVKGLVEDNSQNLASNGEPAAPSSPPTISTSANISSLPPNLSPPHSAGLLNPFSKNYMYSKSILGGAAAAAAAERARLGSLPMWAMPGLPPGMPPLASHSLSSSYDSPLKRKKLQSLLNNRDTPILRTVLGQSLQQPATGSSASASPPGSSQSPAADSSQQPVSLVCHPERAQSNGSAHSRSYKGEPSMDDDQHSYSDINVDEEMNESVGKMMLPGSTHPTYSGDMKGGIAPYVPAQKPEWKRYKQYTRNDIMSAIDAVRNGMSALQAARKFGVPSRTLYDKVKKLGITTSRPFKRGSFQFGGGLSASQENLNHSGGNFCSQSDAEEQVSSDNIMGKSDDGRDEATAASVLIRASPCRSPSPPGLQGHFMSGASGHFRASSSPSPTASSGHSHDEVEDLSVSGGRKSSPLPPAVTQVAVPITPLHPHIVSLKESTIDDSSAVRTTTVGGGGDAEHD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01046380;
- 90% Identity
- iTF_01046380;
- 80% Identity
- iTF_01046380;