Ntri002274.1
Basic Information
- Insect
- Neocloeon triangulifer
- Gene Symbol
- bab1
- Assembly
- GCA_031216515.1
- Location
- JASKYO010000003.1:2863007-2865707[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 1.5e-10 2e-07 30.5 0.0 1 38 265 303 265 308 0.90 2 4 6.9e-09 9.3e-06 25.1 0.1 2 38 320 356 319 362 0.87 3 4 1.2e-15 1.7e-12 46.7 0.0 3 42 376 415 374 417 0.95 4 4 1.9e-17 2.6e-14 52.5 0.0 2 40 426 465 425 467 0.95
Sequence Information
- Coding Sequence
- ATGAATACCAACAACCAACACTTTTGTTTACGATGGAACAACTATCAAGCAAACATGACCTCCGTTTTCCACCAGCTCCTGACGGATGAAGCCTTCGTGGACGTCACCCTCGCCTGCAATGAGGAAACCCTCAAAGCACACAAGGTGGTCCTGTCGGCATGTTCGCCGTACTTCCAGAAACTGTTACTGGACAACCCATGCAAGCACCCCGTTATCATCCTCCCTCAGGAGGTGAGTTTCCTTGACCTGCAGTTCATCATCGACTTTGTGTACCGCGGTGAGGTGGACGTCAGTCAGGAGGAGCTGCAGAGTTTGCTGCGAACGGCCGAGCAGCTCAAAATCAAGGGTCTGTGCGACGTGGCCGCCCGCGAGATGGGCCACCGCGGCCACGCCAAAGTCAAGTACTCGACGTTCAAACGCAAATTGCACGAGCCGGAGCCCATCGAGTACTACAAATCATCCAACTCGGAGATGGACGACGAGTATGAAGACGACGACGTGGACGTCGAGGACGACTATGAAGACGACATGGAACCCAAAAACTACAGCAGGAAGGAGCCCTTAATCGACGTCAACGCCAACTCAACACAACAGAAGTCGCACGAGCCACCCATCAGCAGATTGGACGACCCGCCACCTCTTAAGccaAAGGAAGAGAATCATCAGCAAGCAATGATGATCACCCCAGAACTCCTTGGTCTCATTCCAACCTCCGCCCTGAACAACCTGCATAGTAAAacagTTTCCAGCGAAAACGAGTTGACGTCGACGCACAAAACGACAAAACACTGGACGCAGGAGGACATGGAGTTGGCGCTGGAGGCGCTGCGCTCGCAGACCATGAACCTGACCAAGGCGTCGGCCACCTACGGCATCCCCTCCACCACCCTGTGGCAGCGAGCCCATCGACTGGGGATCAACACCCCAAAGAAGGACAACGCGGCCAAGACGTGGAGCGAAGCGGATCTTGAGGTGGCCCTCAAAGAGCTGCGCGCGGGCAGAATTTCGGCCAATCGCGCCTCCAAGCAGTACAACATCCCCAGCAGCACGCTTTACAAGATAGCGCGGAAAGAGGGCATCAAACTGTCAGCGCCCTTCAACGCCTCCCCCACCTCTTGGAACTCCGACGACCTTTCACGGGCCCTGgagGCAATTCGAAGAGGGGCCTCCGTCCAGAAAGCCGCGTCCGAGTTTGGAATTCCGTCCGGGACTCTTTACGGAAGGTGCAAGCGCGAAGGCATTGAGCTCTGCAAAAATACCCCTGTGCCCTGGAGCCACACGGACATGTCCGAGGCGCTCGAGGCGGTCCGCGTGGGCGACATGTCCATCAACCAGGCGGCCATCCACTACAACCTGCCCTACTCAAGTCTCTACGGCCGCTTCAAGAGGGTCAAGTTTGACGACAACAAGATGGACTACGATGTGTTCACCAATTGCTCCAGTGATCCACACTGA
- Protein Sequence
- MNTNNQHFCLRWNNYQANMTSVFHQLLTDEAFVDVTLACNEETLKAHKVVLSACSPYFQKLLLDNPCKHPVIILPQEVSFLDLQFIIDFVYRGEVDVSQEELQSLLRTAEQLKIKGLCDVAAREMGHRGHAKVKYSTFKRKLHEPEPIEYYKSSNSEMDDEYEDDDVDVEDDYEDDMEPKNYSRKEPLIDVNANSTQQKSHEPPISRLDDPPPLKPKEENHQQAMMITPELLGLIPTSALNNLHSKTVSSENELTSTHKTTKHWTQEDMELALEALRSQTMNLTKASATYGIPSTTLWQRAHRLGINTPKKDNAAKTWSEADLEVALKELRAGRISANRASKQYNIPSSTLYKIARKEGIKLSAPFNASPTSWNSDDLSRALEAIRRGASVQKAASEFGIPSGTLYGRCKREGIELCKNTPVPWSHTDMSEALEAVRVGDMSINQAAIHYNLPYSSLYGRFKRVKFDDNKMDYDVFTNCSSDPH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01046395;
- 90% Identity
- iTF_01046395;
- 80% Identity
- iTF_01046395;