Basic Information

Gene Symbol
ct
Assembly
GCA_031216515.1
Location
JASKYO010000002.1:5952434-5994354[+]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 4e-28 3.3e-24 84.6 0.0 2 72 582 653 581 658 0.95
2 3 3e-32 2.5e-28 97.8 0.1 3 77 1003 1078 1001 1080 0.96
3 3 5.5e-31 4.5e-27 93.7 0.1 3 75 1217 1290 1215 1294 0.96

Sequence Information

Coding Sequence
ATGCTGTTCCTTGCTGCGTTAGTCGGAGATTCAGCCTTGAGTGATAAGGTCGGCGTAGCGGCGCCCCAGCCACCAGCAAGTAACGCACGTCCGACGGCCCTCGCAAACGCACCCCACCGTCGGCCGGCGCCCATGCCACCTGTGCTCTATGCATTTACAAATCGTCCGGACTTGTGTGATGGCCTAGAGTTGGTTCTCCTTCGGCGTTGGACGAGCAGCAGGTTGGACGCGCGGATGAGCGCCACTTTTCCGCCCCCGAGTCTCGAGCACCCGGCCACCAAGATTGAGAACGTGATCAACGAGTTGACAACATCTCGGAGTGTTGTGAACCACAACCAAAGCATGGACATTCAAGCTATGCAATCAATGGACTGGCTCTTCAAGAAAGAACGCATTTATCTCCTCGCGCAGTTTTGGCAGCAGAGAGCGACGCTCGCCGAAAAGGAAGTTTCCGCCCTGAAGGAGCAGTTGGCCGGCCAGGGTGACAACAACAACAAGACCTCGTCGGCACACGCGTCGTCCAGCATGCCCGCCAAGCAGGCGAGCAGCGAGGCCTCCGAGAACAACCCCGGCCAGGGGGAGTCCGGGGCCCGACCGGGCTTCGAACAGGAAATTGCAGCCAAAGAAAAAGAGATCTCACAGTTGAGTGAAGACGTGCAGAGGTTACAAGCGGCGCTCGGCAGGGCCCAGGACTGCACGGCGGCGCAGGTGGCGCGCCTTGAGGAGCAGTTGGACCAGCGGTCGCAGCGCATCGCCAGGCTAGAGGCGCGACTTGACGCCCAGAAGGACTATGAAGATCTCAAAAGGGAACTCAGCGGACTGATTTGTCGTTTCTGTGGTTTCAGCATTCTCAGAGCGTTGGATTTGCCAGCAATTGCGGCCGCAGCGGCCACAGGCACTGAGAGCGGAGGCGGCGCCTCTATGTCCACGCCGTCCGCCAAAGCCCTCGAAATGCTGAACGAAGCTGCCGTGTCCATGGCCGCAAGGGCCACGGCCACTCCACAGTCATCGGCCGTCGAAGAGCAACCACAGCGagGTGGTGGCTCTACTACACCCTCAACCCCCGCAGTTTCTGCCGCCGCAGCGTCGCTTTTCCCGCCCGGCCTGCAAACAGTAGAAACCTTCGGCTCCTTTCTAGGTGAAGAAATCGTGGCCAATTGGCGACGCTCCCTGGAACGCACCATTCTAAGTCAAAACGCAAGCAGCCTGCCGTCCTCCGTCACCCAGTCCCAACAACCACCccaacagcaacaacaacaacagcagcagcaacaacaacagcaacaGCAGGAGGAATCAGAAAAGTCTCCCTTGAATGAGATCAGGCCGTCGCCCCCCTCAACCCCTGAGACCGACCCCAAGGTCAACAGGGTCTCTTGTTCCCCTCCTCCGGCCCCTTCGACGCCCTCGATGCAACAAATGCTGCAACAGCACCAGGCCGCCCTGCAGCAGCACATGCTGCTCAACGGAGGCCCCAAGTCGCCGCCCGGCGACTCGTGTGGCAGCGGCATGCACAGCCCCAACGGCCCCCTGGGCCTCATGAACCCCTCGGGGCCACCGACCTCCGTCGCCAGCGCCCTGATGGGCTCCGAGCCCCCGAAATCCAGTCCCTTCCGCTTCGACGAGCGAGGCCCTTTCCGGTTTGAGGACCGCCTCAGCCTGGGCGAGTCCCTCATTCCCAAGGGCGACCCCATGGAGGCGCGTCTGCAGGAGATGCTGCGCTACAACATGGACCAGTACGCCAGTCAGAATTTGGACACTTTGCACATTGCTCGTCGCGTGCGCGAGTTGCTCTCCATTCACAACATCGGCCAGCGGCTGTTCGCCAAGTACGTCCTTGGCCTGTCTCAAGGCACGGTCAGCGAGTTGCTGTCCAAACCCAAGCCCTGGGACAAACTGACCGAGAAGGGACGCGACTCGTACAGAAAGATGCACGCGTGGGCGTGCGACGAGAACGCCGTCATGCTGCTCAAGTCGCTCATTCCAAAGAAAGGCAAAGAAGGCGCCGCCGGCATTCCCACCTTCGGCGGCCGACCCGACGACTCGATGACCGAGGAGCGGATCGCGCACATCCTCAGCGAGGCCAGTCAGGCCATGAAGGGCGGCTCCATGCCCGGAGCCCCGCCCGGAGTGTCCGCCAACCTTGCCGCGGCCGTCGCAGCGGCGGCCGCAGCCGCTCAGCAGGAAGACGCGCGCAGCACCGACAGCCGCTCGCCTGCATCAGCTCaggagAAGGTTGCCAGAATTTACCAAGAAGAACTGGCTAAGCTGATGGGTCGTCGACTTGAGGATTCTTTGAGAGCAGCTCAAGGCGGGGCCGGACCAGGTGGACCTGGACAGCATTTCCCTagTCTGTTGTTCCCTCACTTCTTTGGCCCAGGCGGCCCTGCCGGTGGCATGGACCGCACCCACGACGAAATCCGCATGGCCCTTGACGCGTACCACCGCGAACTGGCCAAGCTGAACCACAACGCCCTGCAGGGCGGAAACATCCCTCCCGGCCTGCTGGGTCTGCACCCGCAGATGCCGCTGATGAACGGTTCAGGTGGAGGCGTGCAGGACCTGTCGCTGCCCAAGGAGCGGCCGTCCAGTGCGCGCGACATGAAGCACTCGCCGCACCActcgagcagcagcagccacaaCGGACCCTTGTCCGATGTTGATGACAAGGGGTCGGTGGCTAAAGAGCTGAGTGCGGCCACCGAGGCGGCCGTGGCCGACGCCCTGCGCCACGCAGGCAGCGCCTTCTCCCTTGTCAGACCAAAAGCAGAGCCGAGCAGCCAAGCCAGCAGTGGTTCCTCCACAGCCCCCAGTCCACTGAATTCCATCTTGCCACCCACAGGCCCTGAAGACTTTGCCACTTCCTCGGCCAGTCCCTTGCAGCGAATGGCTTCGATCACCAACTCGCTTATCTCAACACCCAACACACCGTCCCACCACAGCCCGGCCCAGCGACCCCTCAAAGCGGTGCTGCCGCCCATCACGCAGCAGCAGTTTGACCAGTTCAACAACCTCAACACCGAAGACATTGTCAAGAAGGTCAAGGAGCAACTTAGTCAATATTCCATAAGTCAACGCCTCTTCGGCGAATCAGTCCTTGGATTATCTCAGGGTTCAGTGTCAGACCTGTTGGCGCGACCCAAGCCGTGGCACATGCTCACACAAAAGGGACGCGAGCCTTTCATTCGCATGAAGATGTTCTTGGAGGACGAGAATGCGGTGCACAAGTTGGTCGCCTCACAATACAAAATTGCTCCAGAGAAGCTGATGAGGACCGGCGGCTACGGTTCCATCAATCCTCCTCCGGCCCAGAAAACGCCAAAGCTGCATGACCCCATGGCAAAAGCAATGGAATCCGCGGCCGCCGCTCTCGGCAACCCGATGGCCCTCCTGCCCAGCTTGGTGCCACCCTCTGCACAGTCCACCCCTTCCTCCACCCCGTCTCTACCGCCCCCAATGCAGACGCCACCCACCCCCTCACCAGGCTTGCTGAGGCATCCGGGCAGTCCACCAATGACCCCCGACTCACCCAGCTCAGCGGCGTCGCTGCTCAAGAAGCACTCGCCTGCTGGAAACATGCCGAGGGCCATGGCCGCGGCCGCTGCGGCCATGCAGCAGCCCAGTGTGTACGAAATGGCCGCCCTGACGCAGGACCTGGACACGCAGTTGATCACGACAAGAATTAAGGAGGCACTGCTTGCCAACAATATTGGGCAAAAGATTTTTGGTGAGGTCGTTCTTGGCCTATCTCAGGGCTCGGTGAGCGAATTGCTTTCGAAACCGAAGCCTTGGCACATGCTGAGCATCAAGGGTCGCGAGCCATTCATCCGCATGCAACTGTGGCTGACCGACCCGAACAACGTGGACCGGCTGCAGCAGATGAAAAGCGAGCGGCGCGAGGCCAACAAGCGTCGCCGCACCACCACTGGCAACAACGGCCCGACCGACAACAGCAGCGACACGTCGTCCAACGACACTGCCGACTTTTACCACACCAATGACGGCAGCCCCGGGCCTCCAAGCGCCAAAAAGCAGCGCGTCCTCTTCAGCGAGGAGCAGAAGGAGGCCCTGCGCCTTGCCTTCGCGCTTGACCCCTACCCCAACATGGCCACCATCGAGTTCTTGGCGTCCGAACTGAACCTGGCCGCGCGCACCATCACCAACTGGTTCCACAACCACCGGATGCGCCTCAAGCAGACCATCCCGCACAACAACAATGACGCCTCGCCGCCGGCGGCGCTCTCGAACTCGAACTCGTCGACCTTTGACCCGGGTCACTTCCGCCTGCTGCTGACCCAGCGCCTCACCGAGATCCACAAGGAGCGCGGAGGCGGCGCCATGCCACCCTTCCCCTTCTTCAACCCCTCCGTGGCGGCCATGGTTAGTccggcggcggccgcctccATGCCCCAGCTGCCCCCTCTGCCCCCGCAACACCTCCTGATGGCGGCGGCCATGCGAGAACAGTTGTCCGGACTAGACTTGAGCATGACCTCGCTGAAGAAGGAGTCGGACGACGAGGATTCCGGCGACGACTCGGACGCCGACTCGAACGGCTCGCACGACTTCCGCAAAACCGAGCGCGTGACCGCCACCCCCGCAGCCGCCCCCGCCAGGTCGTCGAGACGAAAACCGGCGGCGCCGCAGTGGGTGAACCCGGAGTGGCAGGCGGACGAGAAGGACAAGGACGAGACCAAAGACTCGCCGCCGGCCATCATCAACGGCGTCTGCGTCATGCAGGGCAACAACTTTGACTCTCTGCGGAGGCGGAGCGGCGAGCTGGACGACGATACGGTGCGCATCGAGCCCACGGCCGCCGACAAAAATGCAGAAAAGGACTTGAGTCTGGAGGAGGACAAGGACGAGGTGTCCGGCGAGCAGACCAAGCTCGAGTTGAACGTGACGAGTGCAGAGCAGGCGGACGAGGACGACGACTGGGAGCAGAAAATCGAGCAAGACAAACAGCGCCAGGCCAAGGTGGACAGCAGCAATGCTGCCGAGGACTGggatttttaa
Protein Sequence
MLFLAALVGDSALSDKVGVAAPQPPASNARPTALANAPHRRPAPMPPVLYAFTNRPDLCDGLELVLLRRWTSSRLDARMSATFPPPSLEHPATKIENVINELTTSRSVVNHNQSMDIQAMQSMDWLFKKERIYLLAQFWQQRATLAEKEVSALKEQLAGQGDNNNKTSSAHASSSMPAKQASSEASENNPGQGESGARPGFEQEIAAKEKEISQLSEDVQRLQAALGRAQDCTAAQVARLEEQLDQRSQRIARLEARLDAQKDYEDLKRELSGLICRFCGFSILRALDLPAIAAAAATGTESGGGASMSTPSAKALEMLNEAAVSMAARATATPQSSAVEEQPQRGGGSTTPSTPAVSAAAASLFPPGLQTVETFGSFLGEEIVANWRRSLERTILSQNASSLPSSVTQSQQPPQQQQQQQQQQQQQQQQEESEKSPLNEIRPSPPSTPETDPKVNRVSCSPPPAPSTPSMQQMLQQHQAALQQHMLLNGGPKSPPGDSCGSGMHSPNGPLGLMNPSGPPTSVASALMGSEPPKSSPFRFDERGPFRFEDRLSLGESLIPKGDPMEARLQEMLRYNMDQYASQNLDTLHIARRVRELLSIHNIGQRLFAKYVLGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDENAVMLLKSLIPKKGKEGAAGIPTFGGRPDDSMTEERIAHILSEASQAMKGGSMPGAPPGVSANLAAAVAAAAAAAQQEDARSTDSRSPASAQEKVARIYQEELAKLMGRRLEDSLRAAQGGAGPGGPGQHFPSLLFPHFFGPGGPAGGMDRTHDEIRMALDAYHRELAKLNHNALQGGNIPPGLLGLHPQMPLMNGSGGGVQDLSLPKERPSSARDMKHSPHHSSSSSHNGPLSDVDDKGSVAKELSAATEAAVADALRHAGSAFSLVRPKAEPSSQASSGSSTAPSPLNSILPPTGPEDFATSSASPLQRMASITNSLISTPNTPSHHSPAQRPLKAVLPPITQQQFDQFNNLNTEDIVKKVKEQLSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDENAVHKLVASQYKIAPEKLMRTGGYGSINPPPAQKTPKLHDPMAKAMESAAAALGNPMALLPSLVPPSAQSTPSSTPSLPPPMQTPPTPSPGLLRHPGSPPMTPDSPSSAASLLKKHSPAGNMPRAMAAAAAAMQQPSVYEMAALTQDLDTQLITTRIKEALLANNIGQKIFGEVVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLTDPNNVDRLQQMKSERREANKRRRTTTGNNGPTDNSSDTSSNDTADFYHTNDGSPGPPSAKKQRVLFSEEQKEALRLAFALDPYPNMATIEFLASELNLAARTITNWFHNHRMRLKQTIPHNNNDASPPAALSNSNSSTFDPGHFRLLLTQRLTEIHKERGGGAMPPFPFFNPSVAAMVSPAAAASMPQLPPLPPQHLLMAAAMREQLSGLDLSMTSLKKESDDEDSGDDSDADSNGSHDFRKTERVTATPAAAPARSSRRKPAAPQWVNPEWQADEKDKDETKDSPPAIINGVCVMQGNNFDSLRRRSGELDDDTVRIEPTAADKNAEKDLSLEEDKDEVSGEQTKLELNVTSAEQADEDDDWEQKIEQDKQRQAKVDSSNAAEDWDF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01046151;
90% Identity
iTF_01046151;
80% Identity
iTF_01046151;